Experiment: Gly-DL-Asp (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00896 and MPMX20_00897 are separated by 68 nucleotides MPMX20_00897 and MPMX20_00898 are separated by 32 nucleotides MPMX20_00898 and MPMX20_00899 are separated by 0 nucleotides
MPMX20_00896: MPMX20_00896 - Membrane-bound lytic murein transglycosylase D, at 944,526 to 945,890
_00896
MPMX20_00897: MPMX20_00897 - Hydroxyacylglutathione hydrolase GloB, at 945,959 to 946,717
_00897
MPMX20_00898: MPMX20_00898 - hypothetical protein, at 946,750 to 947,466
_00898
MPMX20_00899: MPMX20_00899 - Ribonuclease HI, at 947,467 to 947,934
_00899
Position (kb) 945
946
947 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 944.966 kb on + strand, within MPMX20_00896 at 944.966 kb on + strand, within MPMX20_00896 at 944.974 kb on - strand, within MPMX20_00896 at 944.976 kb on - strand, within MPMX20_00896 at 944.991 kb on - strand, within MPMX20_00896 at 944.996 kb on + strand, within MPMX20_00896 at 945.004 kb on - strand, within MPMX20_00896 at 945.122 kb on - strand, within MPMX20_00896 at 945.122 kb on - strand, within MPMX20_00896 at 945.124 kb on + strand, within MPMX20_00896 at 945.127 kb on + strand, within MPMX20_00896 at 945.134 kb on + strand, within MPMX20_00896 at 945.134 kb on + strand, within MPMX20_00896 at 945.135 kb on - strand, within MPMX20_00896 at 945.140 kb on - strand, within MPMX20_00896 at 945.285 kb on + strand, within MPMX20_00896 at 945.286 kb on - strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.297 kb on + strand, within MPMX20_00896 at 945.303 kb on - strand, within MPMX20_00896 at 945.303 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.305 kb on - strand, within MPMX20_00896 at 945.409 kb on - strand, within MPMX20_00896 at 945.497 kb on + strand, within MPMX20_00896 at 945.505 kb on - strand, within MPMX20_00896 at 945.505 kb on - strand, within MPMX20_00896 at 945.519 kb on + strand, within MPMX20_00896 at 945.560 kb on - strand, within MPMX20_00896 at 945.585 kb on - strand, within MPMX20_00896 at 945.588 kb on - strand, within MPMX20_00896 at 945.607 kb on - strand, within MPMX20_00896 at 945.700 kb on - strand, within MPMX20_00896 at 945.703 kb on + strand, within MPMX20_00896 at 945.703 kb on + strand, within MPMX20_00896 at 945.712 kb on + strand, within MPMX20_00896 at 945.768 kb on - strand at 945.788 kb on - strand at 945.788 kb on - strand at 945.788 kb on - strand at 945.808 kb on - strand at 945.815 kb on + strand at 945.815 kb on + strand at 945.815 kb on + strand at 945.815 kb on + strand at 945.815 kb on + strand at 945.815 kb on + strand at 945.823 kb on - strand at 945.847 kb on + strand at 945.855 kb on - strand at 945.855 kb on - strand at 945.857 kb on + strand at 945.862 kb on + strand at 945.865 kb on - strand at 945.896 kb on + strand at 945.904 kb on - strand at 945.968 kb on + strand at 946.056 kb on - strand, within MPMX20_00897 at 946.144 kb on - strand, within MPMX20_00897 at 946.266 kb on - strand, within MPMX20_00897 at 946.283 kb on + strand, within MPMX20_00897 at 946.291 kb on - strand, within MPMX20_00897 at 946.390 kb on + strand, within MPMX20_00897 at 946.390 kb on + strand, within MPMX20_00897 at 946.454 kb on - strand, within MPMX20_00897 at 946.467 kb on + strand, within MPMX20_00897 at 946.544 kb on - strand, within MPMX20_00897 at 946.567 kb on + strand, within MPMX20_00897 at 946.570 kb on - strand, within MPMX20_00897 at 946.583 kb on - strand, within MPMX20_00897 at 946.693 kb on - strand at 946.694 kb on + strand at 946.711 kb on + strand at 946.749 kb on + strand at 946.786 kb on + strand at 946.806 kb on + strand at 946.812 kb on + strand at 946.814 kb on - strand at 946.814 kb on - strand at 946.814 kb on - strand at 946.814 kb on - strand at 946.814 kb on - strand at 946.833 kb on + strand, within MPMX20_00898 at 946.837 kb on + strand, within MPMX20_00898 at 946.884 kb on + strand, within MPMX20_00898 at 946.928 kb on + strand, within MPMX20_00898 at 946.936 kb on - strand, within MPMX20_00898 at 946.944 kb on + strand, within MPMX20_00898 at 946.947 kb on - strand, within MPMX20_00898 at 946.951 kb on - strand, within MPMX20_00898 at 946.972 kb on + strand, within MPMX20_00898 at 946.972 kb on + strand, within MPMX20_00898 at 947.143 kb on + strand, within MPMX20_00898 at 947.157 kb on + strand, within MPMX20_00898 at 947.178 kb on + strand, within MPMX20_00898 at 947.208 kb on + strand, within MPMX20_00898 at 947.216 kb on - strand, within MPMX20_00898 at 947.249 kb on + strand, within MPMX20_00898 at 947.311 kb on + strand, within MPMX20_00898 at 947.311 kb on + strand, within MPMX20_00898 at 947.314 kb on - strand, within MPMX20_00898 at 947.342 kb on + strand, within MPMX20_00898 at 947.349 kb on + strand, within MPMX20_00898 at 947.491 kb on + strand at 947.504 kb on + strand at 947.575 kb on - strand, within MPMX20_00899 at 947.576 kb on - strand, within MPMX20_00899 at 947.707 kb on - strand, within MPMX20_00899
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (C) remove 944,966 + MPMX20_00896 0.32 +0.2 944,966 + MPMX20_00896 0.32 +0.4 944,974 - MPMX20_00896 0.33 +1.3 944,976 - MPMX20_00896 0.33 +0.5 944,991 - MPMX20_00896 0.34 -2.0 944,996 + MPMX20_00896 0.34 +1.2 945,004 - MPMX20_00896 0.35 +1.0 945,122 - MPMX20_00896 0.44 +1.3 945,122 - MPMX20_00896 0.44 -0.0 945,124 + MPMX20_00896 0.44 -0.4 945,127 + MPMX20_00896 0.44 -0.7 945,134 + MPMX20_00896 0.45 -2.4 945,134 + MPMX20_00896 0.45 -0.9 945,135 - MPMX20_00896 0.45 +1.4 945,140 - MPMX20_00896 0.45 +0.3 945,285 + MPMX20_00896 0.56 +0.4 945,286 - MPMX20_00896 0.56 +0.4 945,297 + MPMX20_00896 0.56 -2.0 945,297 + MPMX20_00896 0.56 +0.7 945,297 + MPMX20_00896 0.56 +1.1 945,297 + MPMX20_00896 0.56 -0.6 945,297 + MPMX20_00896 0.56 -0.5 945,297 + MPMX20_00896 0.56 -0.3 945,297 + MPMX20_00896 0.56 +1.2 945,297 + MPMX20_00896 0.56 +2.2 945,297 + MPMX20_00896 0.56 +0.6 945,297 + MPMX20_00896 0.56 -0.9 945,297 + MPMX20_00896 0.56 -0.9 945,297 + MPMX20_00896 0.56 +0.2 945,303 - MPMX20_00896 0.57 +0.4 945,303 - MPMX20_00896 0.57 -0.1 945,305 - MPMX20_00896 0.57 +0.1 945,305 - MPMX20_00896 0.57 +2.7 945,305 - MPMX20_00896 0.57 -0.2 945,305 - MPMX20_00896 0.57 -0.2 945,305 - MPMX20_00896 0.57 -0.2 945,305 - MPMX20_00896 0.57 -1.1 945,305 - MPMX20_00896 0.57 +2.5 945,305 - MPMX20_00896 0.57 -0.1 945,305 - MPMX20_00896 0.57 -0.7 945,305 - MPMX20_00896 0.57 -0.6 945,305 - MPMX20_00896 0.57 -0.1 945,305 - MPMX20_00896 0.57 -1.1 945,305 - MPMX20_00896 0.57 +0.6 945,409 - MPMX20_00896 0.65 -0.1 945,497 + MPMX20_00896 0.71 -0.8 945,505 - MPMX20_00896 0.72 -0.1 945,505 - MPMX20_00896 0.72 +0.9 945,519 + MPMX20_00896 0.73 -2.5 945,560 - MPMX20_00896 0.76 -0.2 945,585 - MPMX20_00896 0.78 +0.3 945,588 - MPMX20_00896 0.78 -0.1 945,607 - MPMX20_00896 0.79 +0.9 945,700 - MPMX20_00896 0.86 -0.6 945,703 + MPMX20_00896 0.86 +1.1 945,703 + MPMX20_00896 0.86 +0.6 945,712 + MPMX20_00896 0.87 -2.7 945,768 - -0.2 945,788 - +0.1 945,788 - +0.2 945,788 - +1.5 945,808 - +0.1 945,815 + +0.7 945,815 + -2.1 945,815 + +2.4 945,815 + -0.5 945,815 + +0.1 945,815 + +1.2 945,823 - -0.4 945,847 + +1.1 945,855 - +1.4 945,855 - +1.0 945,857 + +0.4 945,862 + -3.3 945,865 - +0.3 945,896 + +0.7 945,904 - +1.0 945,968 + +2.1 946,056 - MPMX20_00897 0.13 -0.1 946,144 - MPMX20_00897 0.24 +0.2 946,266 - MPMX20_00897 0.40 +0.9 946,283 + MPMX20_00897 0.43 +1.7 946,291 - MPMX20_00897 0.44 -0.2 946,390 + MPMX20_00897 0.57 +0.3 946,390 + MPMX20_00897 0.57 +0.6 946,454 - MPMX20_00897 0.65 +1.4 946,467 + MPMX20_00897 0.67 +0.3 946,544 - MPMX20_00897 0.77 +0.4 946,567 + MPMX20_00897 0.80 -1.7 946,570 - MPMX20_00897 0.81 +2.8 946,583 - MPMX20_00897 0.82 -0.9 946,693 - +1.2 946,694 + +2.1 946,711 + +0.5 946,749 + +0.6 946,786 + -0.5 946,806 + +1.6 946,812 + +0.9 946,814 - -0.7 946,814 - -0.3 946,814 - +0.2 946,814 - -3.3 946,814 - +0.3 946,833 + MPMX20_00898 0.12 -1.9 946,837 + MPMX20_00898 0.12 -2.4 946,884 + MPMX20_00898 0.19 -0.5 946,928 + MPMX20_00898 0.25 +0.6 946,936 - MPMX20_00898 0.26 -2.4 946,944 + MPMX20_00898 0.27 +2.1 946,947 - MPMX20_00898 0.27 -0.7 946,951 - MPMX20_00898 0.28 +0.1 946,972 + MPMX20_00898 0.31 -1.1 946,972 + MPMX20_00898 0.31 -1.9 947,143 + MPMX20_00898 0.55 -0.3 947,157 + MPMX20_00898 0.57 +2.7 947,178 + MPMX20_00898 0.60 -0.1 947,208 + MPMX20_00898 0.64 -0.4 947,216 - MPMX20_00898 0.65 -1.2 947,249 + MPMX20_00898 0.70 -1.8 947,311 + MPMX20_00898 0.78 +1.0 947,311 + MPMX20_00898 0.78 +1.9 947,314 - MPMX20_00898 0.79 +0.8 947,342 + MPMX20_00898 0.83 +3.9 947,349 + MPMX20_00898 0.84 -1.1 947,491 + -0.8 947,504 + -0.2 947,575 - MPMX20_00899 0.23 +1.4 947,576 - MPMX20_00899 0.23 -2.6 947,707 - MPMX20_00899 0.51 +0.5
Or see this region's nucleotide sequence