Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01146 and MPMX20_01147 overlap by 11 nucleotides MPMX20_01147 and MPMX20_01148 overlap by 4 nucleotides
MPMX20_01146: MPMX20_01146 - p-hydroxybenzoic acid efflux pump subunit AaeB, at 1,208,437 to 1,210,392
_01146
MPMX20_01147: MPMX20_01147 - hypothetical protein, at 1,210,382 to 1,210,597
_01147
MPMX20_01148: MPMX20_01148 - p-hydroxybenzoic acid efflux pump subunit AaeA, at 1,210,594 to 1,211,457
_01148
Position (kb)
1210
1211 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1209.392 kb on + strand, within MPMX20_01146 at 1209.392 kb on + strand, within MPMX20_01146 at 1209.400 kb on - strand, within MPMX20_01146 at 1209.400 kb on - strand, within MPMX20_01146 at 1209.466 kb on - strand, within MPMX20_01146 at 1209.486 kb on - strand, within MPMX20_01146 at 1209.542 kb on + strand, within MPMX20_01146 at 1209.555 kb on - strand, within MPMX20_01146 at 1209.572 kb on - strand, within MPMX20_01146 at 1209.655 kb on + strand, within MPMX20_01146 at 1209.655 kb on + strand, within MPMX20_01146 at 1209.719 kb on + strand, within MPMX20_01146 at 1209.719 kb on + strand, within MPMX20_01146 at 1209.720 kb on - strand, within MPMX20_01146 at 1209.720 kb on - strand, within MPMX20_01146 at 1209.727 kb on - strand, within MPMX20_01146 at 1209.727 kb on - strand, within MPMX20_01146 at 1209.727 kb on - strand, within MPMX20_01146 at 1209.807 kb on - strand, within MPMX20_01146 at 1209.816 kb on - strand, within MPMX20_01146 at 1209.946 kb on + strand, within MPMX20_01146 at 1209.963 kb on + strand, within MPMX20_01146 at 1209.973 kb on + strand, within MPMX20_01146 at 1210.001 kb on + strand, within MPMX20_01146 at 1210.007 kb on + strand, within MPMX20_01146 at 1210.007 kb on + strand, within MPMX20_01146 at 1210.015 kb on - strand, within MPMX20_01146 at 1210.041 kb on + strand, within MPMX20_01146 at 1210.049 kb on - strand, within MPMX20_01146 at 1210.070 kb on + strand, within MPMX20_01146 at 1210.074 kb on - strand, within MPMX20_01146 at 1210.091 kb on + strand, within MPMX20_01146 at 1210.104 kb on - strand, within MPMX20_01146 at 1210.133 kb on + strand, within MPMX20_01146 at 1210.133 kb on + strand, within MPMX20_01146 at 1210.141 kb on - strand, within MPMX20_01146 at 1210.154 kb on - strand, within MPMX20_01146 at 1210.221 kb on - strand at 1210.227 kb on + strand at 1210.235 kb on - strand at 1210.249 kb on - strand at 1210.259 kb on + strand at 1210.373 kb on + strand at 1210.373 kb on + strand at 1210.373 kb on + strand at 1210.373 kb on + strand at 1210.421 kb on + strand, within MPMX20_01147 at 1210.426 kb on + strand, within MPMX20_01147 at 1210.434 kb on - strand, within MPMX20_01147 at 1210.434 kb on - strand, within MPMX20_01147 at 1210.453 kb on - strand, within MPMX20_01147 at 1210.575 kb on - strand, within MPMX20_01147 at 1210.609 kb on + strand at 1210.630 kb on - strand at 1210.643 kb on - strand at 1210.699 kb on + strand, within MPMX20_01148 at 1210.707 kb on - strand, within MPMX20_01148 at 1210.707 kb on - strand, within MPMX20_01148 at 1210.707 kb on - strand, within MPMX20_01148 at 1210.791 kb on + strand, within MPMX20_01148 at 1210.804 kb on - strand, within MPMX20_01148 at 1210.846 kb on - strand, within MPMX20_01148 at 1210.862 kb on - strand, within MPMX20_01148 at 1210.893 kb on - strand, within MPMX20_01148 at 1210.908 kb on + strand, within MPMX20_01148 at 1210.932 kb on + strand, within MPMX20_01148 at 1210.932 kb on + strand, within MPMX20_01148 at 1210.932 kb on + strand, within MPMX20_01148 at 1210.940 kb on - strand, within MPMX20_01148 at 1211.021 kb on + strand, within MPMX20_01148 at 1211.114 kb on + strand, within MPMX20_01148 at 1211.159 kb on + strand, within MPMX20_01148 at 1211.261 kb on + strand, within MPMX20_01148 at 1211.266 kb on + strand, within MPMX20_01148 at 1211.315 kb on + strand, within MPMX20_01148 at 1211.323 kb on - strand, within MPMX20_01148 at 1211.323 kb on - strand, within MPMX20_01148 at 1211.323 kb on - strand, within MPMX20_01148 at 1211.400 kb on + strand at 1211.403 kb on + strand at 1211.408 kb on - strand at 1211.438 kb on + strand at 1211.438 kb on + strand at 1211.441 kb on + strand at 1211.449 kb on - strand at 1211.454 kb on - strand at 1211.458 kb on + strand at 1211.519 kb on + strand at 1211.527 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 1,209,392 + MPMX20_01146 0.49 -0.0 1,209,392 + MPMX20_01146 0.49 -3.8 1,209,400 - MPMX20_01146 0.49 -4.0 1,209,400 - MPMX20_01146 0.49 +2.0 1,209,466 - MPMX20_01146 0.53 +1.0 1,209,486 - MPMX20_01146 0.54 -1.0 1,209,542 + MPMX20_01146 0.56 +1.1 1,209,555 - MPMX20_01146 0.57 -1.9 1,209,572 - MPMX20_01146 0.58 +3.3 1,209,655 + MPMX20_01146 0.62 +0.5 1,209,655 + MPMX20_01146 0.62 +0.6 1,209,719 + MPMX20_01146 0.66 -1.8 1,209,719 + MPMX20_01146 0.66 +0.6 1,209,720 - MPMX20_01146 0.66 +1.4 1,209,720 - MPMX20_01146 0.66 -1.6 1,209,727 - MPMX20_01146 0.66 -1.6 1,209,727 - MPMX20_01146 0.66 -0.3 1,209,727 - MPMX20_01146 0.66 -1.7 1,209,807 - MPMX20_01146 0.70 -2.0 1,209,816 - MPMX20_01146 0.71 +0.5 1,209,946 + MPMX20_01146 0.77 +0.8 1,209,963 + MPMX20_01146 0.78 -3.2 1,209,973 + MPMX20_01146 0.79 -1.8 1,210,001 + MPMX20_01146 0.80 +0.3 1,210,007 + MPMX20_01146 0.80 +0.6 1,210,007 + MPMX20_01146 0.80 +1.2 1,210,015 - MPMX20_01146 0.81 +0.4 1,210,041 + MPMX20_01146 0.82 +0.7 1,210,049 - MPMX20_01146 0.82 +0.7 1,210,070 + MPMX20_01146 0.83 -0.4 1,210,074 - MPMX20_01146 0.84 +0.2 1,210,091 + MPMX20_01146 0.85 +1.5 1,210,104 - MPMX20_01146 0.85 +0.3 1,210,133 + MPMX20_01146 0.87 +0.2 1,210,133 + MPMX20_01146 0.87 +2.6 1,210,141 - MPMX20_01146 0.87 -0.3 1,210,154 - MPMX20_01146 0.88 +1.4 1,210,221 - -0.3 1,210,227 + +0.3 1,210,235 - +0.9 1,210,249 - +0.5 1,210,259 + -0.4 1,210,373 + +1.2 1,210,373 + +0.5 1,210,373 + -3.3 1,210,373 + +0.2 1,210,421 + MPMX20_01147 0.18 -1.1 1,210,426 + MPMX20_01147 0.20 +0.0 1,210,434 - MPMX20_01147 0.24 -2.0 1,210,434 - MPMX20_01147 0.24 -2.4 1,210,453 - MPMX20_01147 0.33 -3.0 1,210,575 - MPMX20_01147 0.89 -0.6 1,210,609 + +0.6 1,210,630 - -1.2 1,210,643 - +1.3 1,210,699 + MPMX20_01148 0.12 +0.3 1,210,707 - MPMX20_01148 0.13 +1.5 1,210,707 - MPMX20_01148 0.13 -2.6 1,210,707 - MPMX20_01148 0.13 -0.5 1,210,791 + MPMX20_01148 0.23 +1.9 1,210,804 - MPMX20_01148 0.24 -3.1 1,210,846 - MPMX20_01148 0.29 -1.4 1,210,862 - MPMX20_01148 0.31 +1.3 1,210,893 - MPMX20_01148 0.35 +0.4 1,210,908 + MPMX20_01148 0.36 -1.3 1,210,932 + MPMX20_01148 0.39 -0.8 1,210,932 + MPMX20_01148 0.39 -0.7 1,210,932 + MPMX20_01148 0.39 +0.0 1,210,940 - MPMX20_01148 0.40 -1.1 1,211,021 + MPMX20_01148 0.49 +0.8 1,211,114 + MPMX20_01148 0.60 +0.5 1,211,159 + MPMX20_01148 0.65 -0.4 1,211,261 + MPMX20_01148 0.77 +1.6 1,211,266 + MPMX20_01148 0.78 +0.2 1,211,315 + MPMX20_01148 0.83 +1.0 1,211,323 - MPMX20_01148 0.84 -3.6 1,211,323 - MPMX20_01148 0.84 -1.3 1,211,323 - MPMX20_01148 0.84 -1.2 1,211,400 + -0.9 1,211,403 + -2.3 1,211,408 - -0.2 1,211,438 + -0.9 1,211,438 + +0.1 1,211,441 + +0.2 1,211,449 - -0.3 1,211,454 - -1.1 1,211,458 + -0.1 1,211,519 + -2.0 1,211,527 - +1.7
Or see this region's nucleotide sequence