Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01147

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01146 and MPMX20_01147 overlap by 11 nucleotidesMPMX20_01147 and MPMX20_01148 overlap by 4 nucleotides MPMX20_01146: MPMX20_01146 - p-hydroxybenzoic acid efflux pump subunit AaeB, at 1,208,437 to 1,210,392 _01146 MPMX20_01147: MPMX20_01147 - hypothetical protein, at 1,210,382 to 1,210,597 _01147 MPMX20_01148: MPMX20_01148 - p-hydroxybenzoic acid efflux pump subunit AaeA, at 1,210,594 to 1,211,457 _01148 Position (kb) 1210 1211Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1209.392 kb on + strand, within MPMX20_01146at 1209.392 kb on + strand, within MPMX20_01146at 1209.400 kb on - strand, within MPMX20_01146at 1209.400 kb on - strand, within MPMX20_01146at 1209.466 kb on - strand, within MPMX20_01146at 1209.486 kb on - strand, within MPMX20_01146at 1209.542 kb on + strand, within MPMX20_01146at 1209.555 kb on - strand, within MPMX20_01146at 1209.572 kb on - strand, within MPMX20_01146at 1209.655 kb on + strand, within MPMX20_01146at 1209.655 kb on + strand, within MPMX20_01146at 1209.719 kb on + strand, within MPMX20_01146at 1209.719 kb on + strand, within MPMX20_01146at 1209.720 kb on - strand, within MPMX20_01146at 1209.720 kb on - strand, within MPMX20_01146at 1209.727 kb on - strand, within MPMX20_01146at 1209.727 kb on - strand, within MPMX20_01146at 1209.727 kb on - strand, within MPMX20_01146at 1209.807 kb on - strand, within MPMX20_01146at 1209.816 kb on - strand, within MPMX20_01146at 1209.946 kb on + strand, within MPMX20_01146at 1209.963 kb on + strand, within MPMX20_01146at 1209.973 kb on + strand, within MPMX20_01146at 1210.001 kb on + strand, within MPMX20_01146at 1210.007 kb on + strand, within MPMX20_01146at 1210.007 kb on + strand, within MPMX20_01146at 1210.015 kb on - strand, within MPMX20_01146at 1210.041 kb on + strand, within MPMX20_01146at 1210.049 kb on - strand, within MPMX20_01146at 1210.070 kb on + strand, within MPMX20_01146at 1210.074 kb on - strand, within MPMX20_01146at 1210.091 kb on + strand, within MPMX20_01146at 1210.104 kb on - strand, within MPMX20_01146at 1210.133 kb on + strand, within MPMX20_01146at 1210.133 kb on + strand, within MPMX20_01146at 1210.141 kb on - strand, within MPMX20_01146at 1210.154 kb on - strand, within MPMX20_01146at 1210.221 kb on - strandat 1210.227 kb on + strandat 1210.235 kb on - strandat 1210.249 kb on - strandat 1210.259 kb on + strandat 1210.373 kb on + strandat 1210.373 kb on + strandat 1210.373 kb on + strandat 1210.373 kb on + strandat 1210.421 kb on + strand, within MPMX20_01147at 1210.426 kb on + strand, within MPMX20_01147at 1210.434 kb on - strand, within MPMX20_01147at 1210.434 kb on - strand, within MPMX20_01147at 1210.453 kb on - strand, within MPMX20_01147at 1210.575 kb on - strand, within MPMX20_01147at 1210.609 kb on + strandat 1210.630 kb on - strandat 1210.643 kb on - strandat 1210.699 kb on + strand, within MPMX20_01148at 1210.707 kb on - strand, within MPMX20_01148at 1210.707 kb on - strand, within MPMX20_01148at 1210.707 kb on - strand, within MPMX20_01148at 1210.791 kb on + strand, within MPMX20_01148at 1210.804 kb on - strand, within MPMX20_01148at 1210.846 kb on - strand, within MPMX20_01148at 1210.862 kb on - strand, within MPMX20_01148at 1210.893 kb on - strand, within MPMX20_01148at 1210.908 kb on + strand, within MPMX20_01148at 1210.932 kb on + strand, within MPMX20_01148at 1210.932 kb on + strand, within MPMX20_01148at 1210.932 kb on + strand, within MPMX20_01148at 1210.940 kb on - strand, within MPMX20_01148at 1211.021 kb on + strand, within MPMX20_01148at 1211.114 kb on + strand, within MPMX20_01148at 1211.159 kb on + strand, within MPMX20_01148at 1211.261 kb on + strand, within MPMX20_01148at 1211.266 kb on + strand, within MPMX20_01148at 1211.315 kb on + strand, within MPMX20_01148at 1211.323 kb on - strand, within MPMX20_01148at 1211.323 kb on - strand, within MPMX20_01148at 1211.323 kb on - strand, within MPMX20_01148at 1211.400 kb on + strandat 1211.403 kb on + strandat 1211.408 kb on - strandat 1211.438 kb on + strandat 1211.438 kb on + strandat 1211.441 kb on + strandat 1211.449 kb on - strandat 1211.454 kb on - strandat 1211.458 kb on + strandat 1211.519 kb on + strandat 1211.527 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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1,209,392 + MPMX20_01146 0.49 -0.0
1,209,392 + MPMX20_01146 0.49 -3.8
1,209,400 - MPMX20_01146 0.49 -4.0
1,209,400 - MPMX20_01146 0.49 +2.0
1,209,466 - MPMX20_01146 0.53 +1.0
1,209,486 - MPMX20_01146 0.54 -1.0
1,209,542 + MPMX20_01146 0.56 +1.1
1,209,555 - MPMX20_01146 0.57 -1.9
1,209,572 - MPMX20_01146 0.58 +3.3
1,209,655 + MPMX20_01146 0.62 +0.5
1,209,655 + MPMX20_01146 0.62 +0.6
1,209,719 + MPMX20_01146 0.66 -1.8
1,209,719 + MPMX20_01146 0.66 +0.6
1,209,720 - MPMX20_01146 0.66 +1.4
1,209,720 - MPMX20_01146 0.66 -1.6
1,209,727 - MPMX20_01146 0.66 -1.6
1,209,727 - MPMX20_01146 0.66 -0.3
1,209,727 - MPMX20_01146 0.66 -1.7
1,209,807 - MPMX20_01146 0.70 -2.0
1,209,816 - MPMX20_01146 0.71 +0.5
1,209,946 + MPMX20_01146 0.77 +0.8
1,209,963 + MPMX20_01146 0.78 -3.2
1,209,973 + MPMX20_01146 0.79 -1.8
1,210,001 + MPMX20_01146 0.80 +0.3
1,210,007 + MPMX20_01146 0.80 +0.6
1,210,007 + MPMX20_01146 0.80 +1.2
1,210,015 - MPMX20_01146 0.81 +0.4
1,210,041 + MPMX20_01146 0.82 +0.7
1,210,049 - MPMX20_01146 0.82 +0.7
1,210,070 + MPMX20_01146 0.83 -0.4
1,210,074 - MPMX20_01146 0.84 +0.2
1,210,091 + MPMX20_01146 0.85 +1.5
1,210,104 - MPMX20_01146 0.85 +0.3
1,210,133 + MPMX20_01146 0.87 +0.2
1,210,133 + MPMX20_01146 0.87 +2.6
1,210,141 - MPMX20_01146 0.87 -0.3
1,210,154 - MPMX20_01146 0.88 +1.4
1,210,221 - -0.3
1,210,227 + +0.3
1,210,235 - +0.9
1,210,249 - +0.5
1,210,259 + -0.4
1,210,373 + +1.2
1,210,373 + +0.5
1,210,373 + -3.3
1,210,373 + +0.2
1,210,421 + MPMX20_01147 0.18 -1.1
1,210,426 + MPMX20_01147 0.20 +0.0
1,210,434 - MPMX20_01147 0.24 -2.0
1,210,434 - MPMX20_01147 0.24 -2.4
1,210,453 - MPMX20_01147 0.33 -3.0
1,210,575 - MPMX20_01147 0.89 -0.6
1,210,609 + +0.6
1,210,630 - -1.2
1,210,643 - +1.3
1,210,699 + MPMX20_01148 0.12 +0.3
1,210,707 - MPMX20_01148 0.13 +1.5
1,210,707 - MPMX20_01148 0.13 -2.6
1,210,707 - MPMX20_01148 0.13 -0.5
1,210,791 + MPMX20_01148 0.23 +1.9
1,210,804 - MPMX20_01148 0.24 -3.1
1,210,846 - MPMX20_01148 0.29 -1.4
1,210,862 - MPMX20_01148 0.31 +1.3
1,210,893 - MPMX20_01148 0.35 +0.4
1,210,908 + MPMX20_01148 0.36 -1.3
1,210,932 + MPMX20_01148 0.39 -0.8
1,210,932 + MPMX20_01148 0.39 -0.7
1,210,932 + MPMX20_01148 0.39 +0.0
1,210,940 - MPMX20_01148 0.40 -1.1
1,211,021 + MPMX20_01148 0.49 +0.8
1,211,114 + MPMX20_01148 0.60 +0.5
1,211,159 + MPMX20_01148 0.65 -0.4
1,211,261 + MPMX20_01148 0.77 +1.6
1,211,266 + MPMX20_01148 0.78 +0.2
1,211,315 + MPMX20_01148 0.83 +1.0
1,211,323 - MPMX20_01148 0.84 -3.6
1,211,323 - MPMX20_01148 0.84 -1.3
1,211,323 - MPMX20_01148 0.84 -1.2
1,211,400 + -0.9
1,211,403 + -2.3
1,211,408 - -0.2
1,211,438 + -0.9
1,211,438 + +0.1
1,211,441 + +0.2
1,211,449 - -0.3
1,211,454 - -1.1
1,211,458 + -0.1
1,211,519 + -2.0
1,211,527 - +1.7

Or see this region's nucleotide sequence