Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03333 and MPMX20_03334 are separated by 24 nucleotides MPMX20_03334 and MPMX20_03335 are separated by 36 nucleotides MPMX20_03335 and MPMX20_03336 are separated by 73 nucleotides
MPMX20_03333: MPMX20_03333 - Succinyl-diaminopimelate desuccinylase, at 3,506,754 to 3,507,881
_03333
MPMX20_03334: MPMX20_03334 - hypothetical protein, at 3,507,906 to 3,508,103
_03334
MPMX20_03335: MPMX20_03335 - hypothetical protein, at 3,508,140 to 3,508,835
_03335
MPMX20_03336: MPMX20_03336 - tRNA(Met) cytidine acetyltransferase TmcA, at 3,508,909 to 3,510,882
_03336
Position (kb)
3507
3508
3509 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3507.989 kb on - strand, within MPMX20_03334 at 3508.068 kb on + strand, within MPMX20_03334 at 3508.112 kb on + strand at 3508.112 kb on + strand at 3508.112 kb on + strand at 3508.206 kb on - strand at 3508.216 kb on + strand, within MPMX20_03335 at 3508.224 kb on - strand, within MPMX20_03335 at 3508.362 kb on + strand, within MPMX20_03335 at 3508.370 kb on - strand, within MPMX20_03335 at 3508.370 kb on - strand, within MPMX20_03335 at 3508.370 kb on - strand, within MPMX20_03335 at 3508.480 kb on - strand, within MPMX20_03335 at 3508.492 kb on - strand, within MPMX20_03335 at 3508.501 kb on - strand, within MPMX20_03335 at 3508.548 kb on - strand, within MPMX20_03335 at 3508.550 kb on + strand, within MPMX20_03335 at 3508.558 kb on - strand, within MPMX20_03335 at 3508.629 kb on + strand, within MPMX20_03335 at 3508.656 kb on + strand, within MPMX20_03335 at 3508.668 kb on + strand, within MPMX20_03335 at 3508.678 kb on + strand, within MPMX20_03335 at 3508.785 kb on + strand at 3508.972 kb on + strand at 3509.030 kb on + strand at 3509.040 kb on + strand at 3509.048 kb on - strand at 3509.050 kb on + strand at 3509.053 kb on - strand at 3509.074 kb on - strand at 3509.100 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 3,507,989 - MPMX20_03334 0.42 -1.3 3,508,068 + MPMX20_03334 0.82 -1.0 3,508,112 + +0.9 3,508,112 + +0.8 3,508,112 + -0.4 3,508,206 - -0.9 3,508,216 + MPMX20_03335 0.11 +1.0 3,508,224 - MPMX20_03335 0.12 +0.7 3,508,362 + MPMX20_03335 0.32 -1.0 3,508,370 - MPMX20_03335 0.33 -0.2 3,508,370 - MPMX20_03335 0.33 -2.6 3,508,370 - MPMX20_03335 0.33 -0.7 3,508,480 - MPMX20_03335 0.49 +0.9 3,508,492 - MPMX20_03335 0.51 -1.1 3,508,501 - MPMX20_03335 0.52 -0.5 3,508,548 - MPMX20_03335 0.59 -0.0 3,508,550 + MPMX20_03335 0.59 +0.1 3,508,558 - MPMX20_03335 0.60 +2.4 3,508,629 + MPMX20_03335 0.70 +0.6 3,508,656 + MPMX20_03335 0.74 -1.1 3,508,668 + MPMX20_03335 0.76 -0.4 3,508,678 + MPMX20_03335 0.77 +0.7 3,508,785 + +0.1 3,508,972 + +0.6 3,509,030 + -0.9 3,509,040 + +0.6 3,509,048 - -1.8 3,509,050 + +0.7 3,509,053 - +0.6 3,509,074 - +1.1 3,509,100 - -2.9
Or see this region's nucleotide sequence