Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03334

Experiment: L-Phenylalanine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03333 and MPMX20_03334 are separated by 24 nucleotidesMPMX20_03334 and MPMX20_03335 are separated by 36 nucleotidesMPMX20_03335 and MPMX20_03336 are separated by 73 nucleotides MPMX20_03333: MPMX20_03333 - Succinyl-diaminopimelate desuccinylase, at 3,506,754 to 3,507,881 _03333 MPMX20_03334: MPMX20_03334 - hypothetical protein, at 3,507,906 to 3,508,103 _03334 MPMX20_03335: MPMX20_03335 - hypothetical protein, at 3,508,140 to 3,508,835 _03335 MPMX20_03336: MPMX20_03336 - tRNA(Met) cytidine acetyltransferase TmcA, at 3,508,909 to 3,510,882 _03336 Position (kb) 3507 3508 3509Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3507.989 kb on - strand, within MPMX20_03334at 3508.068 kb on + strand, within MPMX20_03334at 3508.112 kb on + strandat 3508.112 kb on + strandat 3508.112 kb on + strandat 3508.206 kb on - strandat 3508.216 kb on + strand, within MPMX20_03335at 3508.224 kb on - strand, within MPMX20_03335at 3508.362 kb on + strand, within MPMX20_03335at 3508.370 kb on - strand, within MPMX20_03335at 3508.370 kb on - strand, within MPMX20_03335at 3508.370 kb on - strand, within MPMX20_03335at 3508.480 kb on - strand, within MPMX20_03335at 3508.492 kb on - strand, within MPMX20_03335at 3508.501 kb on - strand, within MPMX20_03335at 3508.548 kb on - strand, within MPMX20_03335at 3508.550 kb on + strand, within MPMX20_03335at 3508.558 kb on - strand, within MPMX20_03335at 3508.629 kb on + strand, within MPMX20_03335at 3508.656 kb on + strand, within MPMX20_03335at 3508.668 kb on + strand, within MPMX20_03335at 3508.678 kb on + strand, within MPMX20_03335at 3508.785 kb on + strandat 3508.972 kb on + strandat 3509.030 kb on + strandat 3509.040 kb on + strandat 3509.048 kb on - strandat 3509.050 kb on + strandat 3509.053 kb on - strandat 3509.074 kb on - strandat 3509.100 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (C)
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3,507,989 - MPMX20_03334 0.42 -1.3
3,508,068 + MPMX20_03334 0.82 -1.0
3,508,112 + +0.9
3,508,112 + +0.8
3,508,112 + -0.4
3,508,206 - -0.9
3,508,216 + MPMX20_03335 0.11 +1.0
3,508,224 - MPMX20_03335 0.12 +0.7
3,508,362 + MPMX20_03335 0.32 -1.0
3,508,370 - MPMX20_03335 0.33 -0.2
3,508,370 - MPMX20_03335 0.33 -2.6
3,508,370 - MPMX20_03335 0.33 -0.7
3,508,480 - MPMX20_03335 0.49 +0.9
3,508,492 - MPMX20_03335 0.51 -1.1
3,508,501 - MPMX20_03335 0.52 -0.5
3,508,548 - MPMX20_03335 0.59 -0.0
3,508,550 + MPMX20_03335 0.59 +0.1
3,508,558 - MPMX20_03335 0.60 +2.4
3,508,629 + MPMX20_03335 0.70 +0.6
3,508,656 + MPMX20_03335 0.74 -1.1
3,508,668 + MPMX20_03335 0.76 -0.4
3,508,678 + MPMX20_03335 0.77 +0.7
3,508,785 + +0.1
3,508,972 + +0.6
3,509,030 + -0.9
3,509,040 + +0.6
3,509,048 - -1.8
3,509,050 + +0.7
3,509,053 - +0.6
3,509,074 - +1.1
3,509,100 - -2.9

Or see this region's nucleotide sequence