Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03282 and MPMX20_03283 are separated by 0 nucleotides MPMX20_03283 and MPMX20_03284 are separated by 185 nucleotides
MPMX20_03282: MPMX20_03282 - Putative ion-transport protein YfeO, at 3,453,917 to 3,455,152
_03282
MPMX20_03283: MPMX20_03283 - Indole-3-pyruvate decarboxylase, at 3,455,153 to 3,456,811
_03283
MPMX20_03284: MPMX20_03284 - L-glyceraldehyde 3-phosphate reductase, at 3,456,997 to 3,457,995
_03284
Position (kb)
3455
3456
3457 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3454.181 kb on + strand, within MPMX20_03282 at 3454.245 kb on - strand, within MPMX20_03282 at 3454.257 kb on + strand, within MPMX20_03282 at 3454.265 kb on - strand, within MPMX20_03282 at 3454.265 kb on - strand, within MPMX20_03282 at 3454.277 kb on - strand, within MPMX20_03282 at 3454.305 kb on - strand, within MPMX20_03282 at 3454.346 kb on + strand, within MPMX20_03282 at 3454.351 kb on + strand, within MPMX20_03282 at 3454.351 kb on + strand, within MPMX20_03282 at 3454.351 kb on + strand, within MPMX20_03282 at 3454.359 kb on - strand, within MPMX20_03282 at 3454.369 kb on - strand, within MPMX20_03282 at 3454.462 kb on - strand, within MPMX20_03282 at 3454.466 kb on + strand, within MPMX20_03282 at 3454.557 kb on + strand, within MPMX20_03282 at 3454.660 kb on - strand, within MPMX20_03282 at 3454.707 kb on - strand, within MPMX20_03282 at 3454.754 kb on - strand, within MPMX20_03282 at 3454.754 kb on - strand, within MPMX20_03282 at 3454.806 kb on - strand, within MPMX20_03282 at 3454.834 kb on + strand, within MPMX20_03282 at 3454.834 kb on + strand, within MPMX20_03282 at 3454.842 kb on - strand, within MPMX20_03282 at 3454.931 kb on - strand, within MPMX20_03282 at 3454.931 kb on - strand, within MPMX20_03282 at 3455.021 kb on - strand, within MPMX20_03282 at 3455.087 kb on - strand at 3455.159 kb on - strand at 3455.178 kb on + strand at 3455.295 kb on + strand at 3455.295 kb on + strand at 3455.303 kb on - strand at 3455.314 kb on - strand at 3455.316 kb on + strand at 3455.373 kb on - strand, within MPMX20_03283 at 3455.415 kb on - strand, within MPMX20_03283 at 3455.658 kb on - strand, within MPMX20_03283 at 3455.659 kb on - strand, within MPMX20_03283 at 3455.741 kb on - strand, within MPMX20_03283 at 3455.758 kb on + strand, within MPMX20_03283 at 3455.766 kb on - strand, within MPMX20_03283 at 3455.783 kb on - strand, within MPMX20_03283 at 3455.840 kb on - strand, within MPMX20_03283 at 3455.911 kb on + strand, within MPMX20_03283 at 3455.919 kb on - strand, within MPMX20_03283 at 3456.007 kb on + strand, within MPMX20_03283 at 3456.015 kb on - strand, within MPMX20_03283 at 3456.025 kb on - strand, within MPMX20_03283 at 3456.034 kb on - strand, within MPMX20_03283 at 3456.070 kb on - strand, within MPMX20_03283 at 3456.127 kb on - strand, within MPMX20_03283 at 3456.134 kb on + strand, within MPMX20_03283 at 3456.223 kb on + strand, within MPMX20_03283 at 3456.231 kb on - strand, within MPMX20_03283 at 3456.243 kb on + strand, within MPMX20_03283 at 3456.253 kb on + strand, within MPMX20_03283 at 3456.356 kb on - strand, within MPMX20_03283 at 3456.368 kb on - strand, within MPMX20_03283 at 3456.456 kb on - strand, within MPMX20_03283 at 3456.480 kb on + strand, within MPMX20_03283 at 3456.483 kb on - strand, within MPMX20_03283 at 3456.553 kb on - strand, within MPMX20_03283 at 3456.658 kb on + strand at 3456.663 kb on - strand at 3456.692 kb on + strand at 3456.713 kb on + strand at 3456.726 kb on - strand at 3456.771 kb on - strand at 3456.771 kb on - strand at 3456.771 kb on - strand at 3456.795 kb on + strand at 3456.804 kb on - strand at 3456.817 kb on - strand at 3456.955 kb on + strand at 3456.979 kb on + strand at 3457.209 kb on - strand, within MPMX20_03284 at 3457.283 kb on - strand, within MPMX20_03284 at 3457.290 kb on + strand, within MPMX20_03284 at 3457.298 kb on - strand, within MPMX20_03284 at 3457.298 kb on - strand, within MPMX20_03284 at 3457.311 kb on + strand, within MPMX20_03284 at 3457.337 kb on + strand, within MPMX20_03284 at 3457.372 kb on - strand, within MPMX20_03284 at 3457.388 kb on - strand, within MPMX20_03284 at 3457.434 kb on + strand, within MPMX20_03284 at 3457.442 kb on + strand, within MPMX20_03284 at 3457.462 kb on + strand, within MPMX20_03284 at 3457.474 kb on + strand, within MPMX20_03284 at 3457.513 kb on + strand, within MPMX20_03284 at 3457.521 kb on - strand, within MPMX20_03284 at 3457.548 kb on + strand, within MPMX20_03284 at 3457.590 kb on + strand, within MPMX20_03284 at 3457.598 kb on - strand, within MPMX20_03284 at 3457.748 kb on + strand, within MPMX20_03284 at 3457.748 kb on + strand, within MPMX20_03284
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 3,454,181 + MPMX20_03282 0.21 +2.1 3,454,245 - MPMX20_03282 0.27 +1.1 3,454,257 + MPMX20_03282 0.28 -0.1 3,454,265 - MPMX20_03282 0.28 -0.2 3,454,265 - MPMX20_03282 0.28 +2.1 3,454,277 - MPMX20_03282 0.29 +0.7 3,454,305 - MPMX20_03282 0.31 -1.8 3,454,346 + MPMX20_03282 0.35 +0.1 3,454,351 + MPMX20_03282 0.35 +0.3 3,454,351 + MPMX20_03282 0.35 +3.1 3,454,351 + MPMX20_03282 0.35 +1.3 3,454,359 - MPMX20_03282 0.36 +0.8 3,454,369 - MPMX20_03282 0.37 +1.0 3,454,462 - MPMX20_03282 0.44 -0.2 3,454,466 + MPMX20_03282 0.44 +1.3 3,454,557 + MPMX20_03282 0.52 -2.0 3,454,660 - MPMX20_03282 0.60 -1.3 3,454,707 - MPMX20_03282 0.64 +0.2 3,454,754 - MPMX20_03282 0.68 -0.5 3,454,754 - MPMX20_03282 0.68 -0.3 3,454,806 - MPMX20_03282 0.72 +1.4 3,454,834 + MPMX20_03282 0.74 -3.1 3,454,834 + MPMX20_03282 0.74 -1.2 3,454,842 - MPMX20_03282 0.75 +0.2 3,454,931 - MPMX20_03282 0.82 +0.0 3,454,931 - MPMX20_03282 0.82 +0.7 3,455,021 - MPMX20_03282 0.89 -1.3 3,455,087 - -1.9 3,455,159 - -1.1 3,455,178 + +2.7 3,455,295 + +1.8 3,455,295 + -3.4 3,455,303 - +0.9 3,455,314 - -0.9 3,455,316 + -0.7 3,455,373 - MPMX20_03283 0.13 -0.5 3,455,415 - MPMX20_03283 0.16 -0.1 3,455,658 - MPMX20_03283 0.30 -1.6 3,455,659 - MPMX20_03283 0.31 -2.3 3,455,741 - MPMX20_03283 0.35 -0.9 3,455,758 + MPMX20_03283 0.36 -3.3 3,455,766 - MPMX20_03283 0.37 -0.5 3,455,783 - MPMX20_03283 0.38 -0.5 3,455,840 - MPMX20_03283 0.41 +1.4 3,455,911 + MPMX20_03283 0.46 -0.9 3,455,919 - MPMX20_03283 0.46 +0.2 3,456,007 + MPMX20_03283 0.51 -2.3 3,456,015 - MPMX20_03283 0.52 -1.5 3,456,025 - MPMX20_03283 0.53 -1.5 3,456,034 - MPMX20_03283 0.53 -0.8 3,456,070 - MPMX20_03283 0.55 -0.1 3,456,127 - MPMX20_03283 0.59 -0.7 3,456,134 + MPMX20_03283 0.59 -2.4 3,456,223 + MPMX20_03283 0.64 -0.3 3,456,231 - MPMX20_03283 0.65 +1.7 3,456,243 + MPMX20_03283 0.66 -0.5 3,456,253 + MPMX20_03283 0.66 -1.0 3,456,356 - MPMX20_03283 0.73 -3.3 3,456,368 - MPMX20_03283 0.73 -0.2 3,456,456 - MPMX20_03283 0.79 -2.4 3,456,480 + MPMX20_03283 0.80 -0.5 3,456,483 - MPMX20_03283 0.80 -2.3 3,456,553 - MPMX20_03283 0.84 -1.6 3,456,658 + -2.7 3,456,663 - +1.2 3,456,692 + +1.8 3,456,713 + -2.4 3,456,726 - -4.0 3,456,771 - -3.3 3,456,771 - -0.8 3,456,771 - -1.5 3,456,795 + +0.1 3,456,804 - -0.4 3,456,817 - -1.3 3,456,955 + +1.2 3,456,979 + +0.3 3,457,209 - MPMX20_03284 0.21 -1.4 3,457,283 - MPMX20_03284 0.29 -2.9 3,457,290 + MPMX20_03284 0.29 -1.0 3,457,298 - MPMX20_03284 0.30 +0.3 3,457,298 - MPMX20_03284 0.30 +0.4 3,457,311 + MPMX20_03284 0.31 +1.4 3,457,337 + MPMX20_03284 0.34 -0.7 3,457,372 - MPMX20_03284 0.38 +0.9 3,457,388 - MPMX20_03284 0.39 +2.2 3,457,434 + MPMX20_03284 0.44 -1.4 3,457,442 + MPMX20_03284 0.45 +0.5 3,457,462 + MPMX20_03284 0.47 +0.3 3,457,474 + MPMX20_03284 0.48 +0.5 3,457,513 + MPMX20_03284 0.52 -1.2 3,457,521 - MPMX20_03284 0.52 -0.8 3,457,548 + MPMX20_03284 0.55 +1.4 3,457,590 + MPMX20_03284 0.59 -2.2 3,457,598 - MPMX20_03284 0.60 +0.1 3,457,748 + MPMX20_03284 0.75 -0.3 3,457,748 + MPMX20_03284 0.75 +0.4
Or see this region's nucleotide sequence