Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03283

Experiment: L-Phenylalanine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03282 and MPMX20_03283 are separated by 0 nucleotidesMPMX20_03283 and MPMX20_03284 are separated by 185 nucleotides MPMX20_03282: MPMX20_03282 - Putative ion-transport protein YfeO, at 3,453,917 to 3,455,152 _03282 MPMX20_03283: MPMX20_03283 - Indole-3-pyruvate decarboxylase, at 3,455,153 to 3,456,811 _03283 MPMX20_03284: MPMX20_03284 - L-glyceraldehyde 3-phosphate reductase, at 3,456,997 to 3,457,995 _03284 Position (kb) 3455 3456 3457Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3454.181 kb on + strand, within MPMX20_03282at 3454.245 kb on - strand, within MPMX20_03282at 3454.257 kb on + strand, within MPMX20_03282at 3454.265 kb on - strand, within MPMX20_03282at 3454.265 kb on - strand, within MPMX20_03282at 3454.277 kb on - strand, within MPMX20_03282at 3454.305 kb on - strand, within MPMX20_03282at 3454.346 kb on + strand, within MPMX20_03282at 3454.351 kb on + strand, within MPMX20_03282at 3454.351 kb on + strand, within MPMX20_03282at 3454.351 kb on + strand, within MPMX20_03282at 3454.359 kb on - strand, within MPMX20_03282at 3454.369 kb on - strand, within MPMX20_03282at 3454.462 kb on - strand, within MPMX20_03282at 3454.466 kb on + strand, within MPMX20_03282at 3454.557 kb on + strand, within MPMX20_03282at 3454.660 kb on - strand, within MPMX20_03282at 3454.707 kb on - strand, within MPMX20_03282at 3454.754 kb on - strand, within MPMX20_03282at 3454.754 kb on - strand, within MPMX20_03282at 3454.806 kb on - strand, within MPMX20_03282at 3454.834 kb on + strand, within MPMX20_03282at 3454.834 kb on + strand, within MPMX20_03282at 3454.842 kb on - strand, within MPMX20_03282at 3454.931 kb on - strand, within MPMX20_03282at 3454.931 kb on - strand, within MPMX20_03282at 3455.021 kb on - strand, within MPMX20_03282at 3455.087 kb on - strandat 3455.159 kb on - strandat 3455.178 kb on + strandat 3455.295 kb on + strandat 3455.295 kb on + strandat 3455.303 kb on - strandat 3455.314 kb on - strandat 3455.316 kb on + strandat 3455.373 kb on - strand, within MPMX20_03283at 3455.415 kb on - strand, within MPMX20_03283at 3455.658 kb on - strand, within MPMX20_03283at 3455.659 kb on - strand, within MPMX20_03283at 3455.741 kb on - strand, within MPMX20_03283at 3455.758 kb on + strand, within MPMX20_03283at 3455.766 kb on - strand, within MPMX20_03283at 3455.783 kb on - strand, within MPMX20_03283at 3455.840 kb on - strand, within MPMX20_03283at 3455.911 kb on + strand, within MPMX20_03283at 3455.919 kb on - strand, within MPMX20_03283at 3456.007 kb on + strand, within MPMX20_03283at 3456.015 kb on - strand, within MPMX20_03283at 3456.025 kb on - strand, within MPMX20_03283at 3456.034 kb on - strand, within MPMX20_03283at 3456.070 kb on - strand, within MPMX20_03283at 3456.127 kb on - strand, within MPMX20_03283at 3456.134 kb on + strand, within MPMX20_03283at 3456.223 kb on + strand, within MPMX20_03283at 3456.231 kb on - strand, within MPMX20_03283at 3456.243 kb on + strand, within MPMX20_03283at 3456.253 kb on + strand, within MPMX20_03283at 3456.356 kb on - strand, within MPMX20_03283at 3456.368 kb on - strand, within MPMX20_03283at 3456.456 kb on - strand, within MPMX20_03283at 3456.480 kb on + strand, within MPMX20_03283at 3456.483 kb on - strand, within MPMX20_03283at 3456.553 kb on - strand, within MPMX20_03283at 3456.658 kb on + strandat 3456.663 kb on - strandat 3456.692 kb on + strandat 3456.713 kb on + strandat 3456.726 kb on - strandat 3456.771 kb on - strandat 3456.771 kb on - strandat 3456.771 kb on - strandat 3456.795 kb on + strandat 3456.804 kb on - strandat 3456.817 kb on - strandat 3456.955 kb on + strandat 3456.979 kb on + strandat 3457.209 kb on - strand, within MPMX20_03284at 3457.283 kb on - strand, within MPMX20_03284at 3457.290 kb on + strand, within MPMX20_03284at 3457.298 kb on - strand, within MPMX20_03284at 3457.298 kb on - strand, within MPMX20_03284at 3457.311 kb on + strand, within MPMX20_03284at 3457.337 kb on + strand, within MPMX20_03284at 3457.372 kb on - strand, within MPMX20_03284at 3457.388 kb on - strand, within MPMX20_03284at 3457.434 kb on + strand, within MPMX20_03284at 3457.442 kb on + strand, within MPMX20_03284at 3457.462 kb on + strand, within MPMX20_03284at 3457.474 kb on + strand, within MPMX20_03284at 3457.513 kb on + strand, within MPMX20_03284at 3457.521 kb on - strand, within MPMX20_03284at 3457.548 kb on + strand, within MPMX20_03284at 3457.590 kb on + strand, within MPMX20_03284at 3457.598 kb on - strand, within MPMX20_03284at 3457.748 kb on + strand, within MPMX20_03284at 3457.748 kb on + strand, within MPMX20_03284

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (C)
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3,454,181 + MPMX20_03282 0.21 +2.1
3,454,245 - MPMX20_03282 0.27 +1.1
3,454,257 + MPMX20_03282 0.28 -0.1
3,454,265 - MPMX20_03282 0.28 -0.2
3,454,265 - MPMX20_03282 0.28 +2.1
3,454,277 - MPMX20_03282 0.29 +0.7
3,454,305 - MPMX20_03282 0.31 -1.8
3,454,346 + MPMX20_03282 0.35 +0.1
3,454,351 + MPMX20_03282 0.35 +0.3
3,454,351 + MPMX20_03282 0.35 +3.1
3,454,351 + MPMX20_03282 0.35 +1.3
3,454,359 - MPMX20_03282 0.36 +0.8
3,454,369 - MPMX20_03282 0.37 +1.0
3,454,462 - MPMX20_03282 0.44 -0.2
3,454,466 + MPMX20_03282 0.44 +1.3
3,454,557 + MPMX20_03282 0.52 -2.0
3,454,660 - MPMX20_03282 0.60 -1.3
3,454,707 - MPMX20_03282 0.64 +0.2
3,454,754 - MPMX20_03282 0.68 -0.5
3,454,754 - MPMX20_03282 0.68 -0.3
3,454,806 - MPMX20_03282 0.72 +1.4
3,454,834 + MPMX20_03282 0.74 -3.1
3,454,834 + MPMX20_03282 0.74 -1.2
3,454,842 - MPMX20_03282 0.75 +0.2
3,454,931 - MPMX20_03282 0.82 +0.0
3,454,931 - MPMX20_03282 0.82 +0.7
3,455,021 - MPMX20_03282 0.89 -1.3
3,455,087 - -1.9
3,455,159 - -1.1
3,455,178 + +2.7
3,455,295 + +1.8
3,455,295 + -3.4
3,455,303 - +0.9
3,455,314 - -0.9
3,455,316 + -0.7
3,455,373 - MPMX20_03283 0.13 -0.5
3,455,415 - MPMX20_03283 0.16 -0.1
3,455,658 - MPMX20_03283 0.30 -1.6
3,455,659 - MPMX20_03283 0.31 -2.3
3,455,741 - MPMX20_03283 0.35 -0.9
3,455,758 + MPMX20_03283 0.36 -3.3
3,455,766 - MPMX20_03283 0.37 -0.5
3,455,783 - MPMX20_03283 0.38 -0.5
3,455,840 - MPMX20_03283 0.41 +1.4
3,455,911 + MPMX20_03283 0.46 -0.9
3,455,919 - MPMX20_03283 0.46 +0.2
3,456,007 + MPMX20_03283 0.51 -2.3
3,456,015 - MPMX20_03283 0.52 -1.5
3,456,025 - MPMX20_03283 0.53 -1.5
3,456,034 - MPMX20_03283 0.53 -0.8
3,456,070 - MPMX20_03283 0.55 -0.1
3,456,127 - MPMX20_03283 0.59 -0.7
3,456,134 + MPMX20_03283 0.59 -2.4
3,456,223 + MPMX20_03283 0.64 -0.3
3,456,231 - MPMX20_03283 0.65 +1.7
3,456,243 + MPMX20_03283 0.66 -0.5
3,456,253 + MPMX20_03283 0.66 -1.0
3,456,356 - MPMX20_03283 0.73 -3.3
3,456,368 - MPMX20_03283 0.73 -0.2
3,456,456 - MPMX20_03283 0.79 -2.4
3,456,480 + MPMX20_03283 0.80 -0.5
3,456,483 - MPMX20_03283 0.80 -2.3
3,456,553 - MPMX20_03283 0.84 -1.6
3,456,658 + -2.7
3,456,663 - +1.2
3,456,692 + +1.8
3,456,713 + -2.4
3,456,726 - -4.0
3,456,771 - -3.3
3,456,771 - -0.8
3,456,771 - -1.5
3,456,795 + +0.1
3,456,804 - -0.4
3,456,817 - -1.3
3,456,955 + +1.2
3,456,979 + +0.3
3,457,209 - MPMX20_03284 0.21 -1.4
3,457,283 - MPMX20_03284 0.29 -2.9
3,457,290 + MPMX20_03284 0.29 -1.0
3,457,298 - MPMX20_03284 0.30 +0.3
3,457,298 - MPMX20_03284 0.30 +0.4
3,457,311 + MPMX20_03284 0.31 +1.4
3,457,337 + MPMX20_03284 0.34 -0.7
3,457,372 - MPMX20_03284 0.38 +0.9
3,457,388 - MPMX20_03284 0.39 +2.2
3,457,434 + MPMX20_03284 0.44 -1.4
3,457,442 + MPMX20_03284 0.45 +0.5
3,457,462 + MPMX20_03284 0.47 +0.3
3,457,474 + MPMX20_03284 0.48 +0.5
3,457,513 + MPMX20_03284 0.52 -1.2
3,457,521 - MPMX20_03284 0.52 -0.8
3,457,548 + MPMX20_03284 0.55 +1.4
3,457,590 + MPMX20_03284 0.59 -2.2
3,457,598 - MPMX20_03284 0.60 +0.1
3,457,748 + MPMX20_03284 0.75 -0.3
3,457,748 + MPMX20_03284 0.75 +0.4

Or see this region's nucleotide sequence