Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03269

Experiment: L-Phenylalanine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03268 and MPMX20_03269 overlap by 1 nucleotidesMPMX20_03269 and MPMX20_03270 are separated by 239 nucleotidesMPMX20_03270 and MPMX20_03271 are separated by 372 nucleotides MPMX20_03268: MPMX20_03268 - Fatty acid oxidation complex subunit alpha, at 3,437,805 to 3,439,952 _03268 MPMX20_03269: MPMX20_03269 - 3-ketoacyl-CoA thiolase FadI, at 3,439,952 to 3,441,262 _03269 MPMX20_03270: MPMX20_03270 - hypothetical protein, at 3,441,502 to 3,441,786 _03270 MPMX20_03271: MPMX20_03271 - Long-chain fatty acid transport protein, at 3,442,159 to 3,443,487 _03271 Position (kb) 3439 3440 3441 3442Strain fitness (log2 ratio) -2 -1 0 1 2at 3439.016 kb on + strand, within MPMX20_03268at 3439.038 kb on + strand, within MPMX20_03268at 3439.078 kb on - strand, within MPMX20_03268at 3439.110 kb on - strand, within MPMX20_03268at 3439.137 kb on + strand, within MPMX20_03268at 3439.137 kb on + strand, within MPMX20_03268at 3439.178 kb on - strand, within MPMX20_03268at 3439.178 kb on - strand, within MPMX20_03268at 3439.204 kb on - strand, within MPMX20_03268at 3439.204 kb on - strand, within MPMX20_03268at 3439.221 kb on + strand, within MPMX20_03268at 3439.266 kb on + strand, within MPMX20_03268at 3439.266 kb on + strand, within MPMX20_03268at 3439.266 kb on + strand, within MPMX20_03268at 3439.266 kb on + strand, within MPMX20_03268at 3439.266 kb on + strand, within MPMX20_03268at 3439.274 kb on - strand, within MPMX20_03268at 3439.274 kb on - strand, within MPMX20_03268at 3439.274 kb on - strand, within MPMX20_03268at 3439.274 kb on - strand, within MPMX20_03268at 3439.274 kb on - strand, within MPMX20_03268at 3439.288 kb on + strand, within MPMX20_03268at 3439.292 kb on + strand, within MPMX20_03268at 3439.465 kb on + strand, within MPMX20_03268at 3439.465 kb on + strand, within MPMX20_03268at 3439.465 kb on + strand, within MPMX20_03268at 3439.473 kb on - strand, within MPMX20_03268at 3439.473 kb on - strand, within MPMX20_03268at 3439.531 kb on + strand, within MPMX20_03268at 3439.537 kb on + strand, within MPMX20_03268at 3439.540 kb on - strand, within MPMX20_03268at 3439.542 kb on + strand, within MPMX20_03268at 3439.560 kb on - strand, within MPMX20_03268at 3439.624 kb on + strand, within MPMX20_03268at 3439.698 kb on - strand, within MPMX20_03268at 3439.709 kb on + strand, within MPMX20_03268at 3439.838 kb on + strandat 3439.987 kb on - strandat 3440.075 kb on - strandat 3440.090 kb on + strand, within MPMX20_03269at 3440.091 kb on - strand, within MPMX20_03269at 3440.167 kb on - strand, within MPMX20_03269at 3440.197 kb on + strand, within MPMX20_03269at 3440.242 kb on - strand, within MPMX20_03269at 3440.249 kb on + strand, within MPMX20_03269at 3440.264 kb on + strand, within MPMX20_03269at 3440.264 kb on + strand, within MPMX20_03269at 3440.264 kb on + strand, within MPMX20_03269at 3440.349 kb on + strand, within MPMX20_03269at 3440.374 kb on + strand, within MPMX20_03269at 3440.570 kb on + strand, within MPMX20_03269at 3440.722 kb on - strand, within MPMX20_03269at 3440.724 kb on + strand, within MPMX20_03269at 3440.732 kb on - strand, within MPMX20_03269at 3440.755 kb on + strand, within MPMX20_03269at 3440.770 kb on + strand, within MPMX20_03269at 3440.778 kb on - strand, within MPMX20_03269at 3440.778 kb on - strand, within MPMX20_03269at 3440.808 kb on - strand, within MPMX20_03269at 3440.869 kb on + strand, within MPMX20_03269at 3440.872 kb on + strand, within MPMX20_03269at 3440.958 kb on - strand, within MPMX20_03269at 3440.973 kb on - strand, within MPMX20_03269at 3441.015 kb on - strand, within MPMX20_03269at 3441.053 kb on + strand, within MPMX20_03269at 3441.251 kb on + strandat 3441.258 kb on + strandat 3441.258 kb on + strandat 3441.266 kb on - strandat 3441.266 kb on - strandat 3441.272 kb on - strandat 3441.493 kb on + strandat 3441.503 kb on - strandat 3441.505 kb on + strandat 3441.505 kb on + strandat 3441.505 kb on + strandat 3441.505 kb on + strandat 3441.580 kb on + strand, within MPMX20_03270at 3441.615 kb on + strand, within MPMX20_03270at 3441.620 kb on + strand, within MPMX20_03270at 3441.620 kb on + strand, within MPMX20_03270at 3441.638 kb on + strand, within MPMX20_03270at 3441.666 kb on - strand, within MPMX20_03270at 3441.687 kb on + strand, within MPMX20_03270at 3441.823 kb on - strandat 3441.847 kb on + strandat 3441.866 kb on - strandat 3441.868 kb on + strandat 3442.042 kb on + strandat 3442.042 kb on + strandat 3442.045 kb on - strandat 3442.045 kb on - strandat 3442.050 kb on - strandat 3442.081 kb on + strandat 3442.081 kb on + strandat 3442.087 kb on + strandat 3442.087 kb on + strandat 3442.089 kb on - strandat 3442.095 kb on - strandat 3442.095 kb on - strandat 3442.095 kb on - strandat 3442.095 kb on - strandat 3442.157 kb on - strandat 3442.157 kb on - strandat 3442.202 kb on - strandat 3442.224 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (C)
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3,439,016 + MPMX20_03268 0.56 +0.3
3,439,038 + MPMX20_03268 0.57 +2.7
3,439,078 - MPMX20_03268 0.59 -2.3
3,439,110 - MPMX20_03268 0.61 -0.1
3,439,137 + MPMX20_03268 0.62 -0.7
3,439,137 + MPMX20_03268 0.62 -0.0
3,439,178 - MPMX20_03268 0.64 -2.3
3,439,178 - MPMX20_03268 0.64 -0.3
3,439,204 - MPMX20_03268 0.65 +0.0
3,439,204 - MPMX20_03268 0.65 +0.1
3,439,221 + MPMX20_03268 0.66 -0.0
3,439,266 + MPMX20_03268 0.68 -1.3
3,439,266 + MPMX20_03268 0.68 -0.8
3,439,266 + MPMX20_03268 0.68 -1.0
3,439,266 + MPMX20_03268 0.68 +1.2
3,439,266 + MPMX20_03268 0.68 +0.8
3,439,274 - MPMX20_03268 0.68 +2.4
3,439,274 - MPMX20_03268 0.68 -0.3
3,439,274 - MPMX20_03268 0.68 -0.4
3,439,274 - MPMX20_03268 0.68 +0.7
3,439,274 - MPMX20_03268 0.68 -0.0
3,439,288 + MPMX20_03268 0.69 +0.1
3,439,292 + MPMX20_03268 0.69 +0.5
3,439,465 + MPMX20_03268 0.77 +1.3
3,439,465 + MPMX20_03268 0.77 -1.2
3,439,465 + MPMX20_03268 0.77 -0.1
3,439,473 - MPMX20_03268 0.78 +1.2
3,439,473 - MPMX20_03268 0.78 +1.7
3,439,531 + MPMX20_03268 0.80 +0.7
3,439,537 + MPMX20_03268 0.81 -0.9
3,439,540 - MPMX20_03268 0.81 +1.7
3,439,542 + MPMX20_03268 0.81 -0.1
3,439,560 - MPMX20_03268 0.82 -0.1
3,439,624 + MPMX20_03268 0.85 +0.7
3,439,698 - MPMX20_03268 0.88 -1.8
3,439,709 + MPMX20_03268 0.89 -0.7
3,439,838 + +0.2
3,439,987 - -0.1
3,440,075 - +1.4
3,440,090 + MPMX20_03269 0.11 -0.5
3,440,091 - MPMX20_03269 0.11 +0.8
3,440,167 - MPMX20_03269 0.16 -0.2
3,440,197 + MPMX20_03269 0.19 -1.0
3,440,242 - MPMX20_03269 0.22 -0.9
3,440,249 + MPMX20_03269 0.23 -1.2
3,440,264 + MPMX20_03269 0.24 +1.5
3,440,264 + MPMX20_03269 0.24 +0.8
3,440,264 + MPMX20_03269 0.24 +0.5
3,440,349 + MPMX20_03269 0.30 +0.7
3,440,374 + MPMX20_03269 0.32 +0.7
3,440,570 + MPMX20_03269 0.47 -1.9
3,440,722 - MPMX20_03269 0.59 -0.8
3,440,724 + MPMX20_03269 0.59 -2.4
3,440,732 - MPMX20_03269 0.59 +0.1
3,440,755 + MPMX20_03269 0.61 -0.4
3,440,770 + MPMX20_03269 0.62 -1.9
3,440,778 - MPMX20_03269 0.63 +0.2
3,440,778 - MPMX20_03269 0.63 -0.2
3,440,808 - MPMX20_03269 0.65 -1.2
3,440,869 + MPMX20_03269 0.70 +1.0
3,440,872 + MPMX20_03269 0.70 +0.9
3,440,958 - MPMX20_03269 0.77 -1.1
3,440,973 - MPMX20_03269 0.78 -0.5
3,441,015 - MPMX20_03269 0.81 -0.3
3,441,053 + MPMX20_03269 0.84 +1.1
3,441,251 + -0.4
3,441,258 + +1.8
3,441,258 + +1.4
3,441,266 - +0.0
3,441,266 - +1.2
3,441,272 - +0.3
3,441,493 + -1.9
3,441,503 - +0.3
3,441,505 + -0.7
3,441,505 + -0.1
3,441,505 + +0.1
3,441,505 + -0.3
3,441,580 + MPMX20_03270 0.27 -0.3
3,441,615 + MPMX20_03270 0.40 -1.7
3,441,620 + MPMX20_03270 0.41 +1.7
3,441,620 + MPMX20_03270 0.41 -1.3
3,441,638 + MPMX20_03270 0.48 -0.7
3,441,666 - MPMX20_03270 0.58 +1.6
3,441,687 + MPMX20_03270 0.65 -0.5
3,441,823 - -1.7
3,441,847 + -0.3
3,441,866 - -0.1
3,441,868 + -0.8
3,442,042 + -1.0
3,442,042 + -2.4
3,442,045 - -0.9
3,442,045 - -2.0
3,442,050 - -0.6
3,442,081 + +0.5
3,442,081 + -1.2
3,442,087 + -0.3
3,442,087 + +0.8
3,442,089 - +1.1
3,442,095 - -0.1
3,442,095 - +1.7
3,442,095 - -0.2
3,442,095 - -1.7
3,442,157 - -2.3
3,442,157 - +0.1
3,442,202 - +0.7
3,442,224 + +0.5

Or see this region's nucleotide sequence