Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02738 and MPMX20_02739 are separated by 96 nucleotides MPMX20_02739 and MPMX20_02740 are separated by 132 nucleotides MPMX20_02740 and MPMX20_02741 overlap by 32 nucleotides
MPMX20_02738: MPMX20_02738 - RNA chaperone ProQ, at 2,892,657 to 2,893,343
_02738
MPMX20_02739: MPMX20_02739 - Free methionine-R-sulfoxide reductase, at 2,893,440 to 2,893,937
_02739
MPMX20_02740: MPMX20_02740 - Intermembrane transport protein YebS, at 2,894,070 to 2,895,353
_02740
MPMX20_02741: MPMX20_02741 - Intermembrane transport protein YebT, at 2,895,322 to 2,897,955
_02741
Position (kb)
2894
2895
2896 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2893.078 kb on + strand, within MPMX20_02738 at 2893.133 kb on + strand, within MPMX20_02738 at 2893.133 kb on + strand, within MPMX20_02738 at 2893.133 kb on + strand, within MPMX20_02738 at 2893.141 kb on - strand, within MPMX20_02738 at 2893.141 kb on - strand, within MPMX20_02738 at 2893.141 kb on - strand, within MPMX20_02738 at 2893.141 kb on - strand, within MPMX20_02738 at 2893.141 kb on - strand, within MPMX20_02738 at 2893.152 kb on + strand, within MPMX20_02738 at 2893.190 kb on + strand, within MPMX20_02738 at 2893.251 kb on + strand, within MPMX20_02738 at 2893.259 kb on - strand, within MPMX20_02738 at 2893.267 kb on + strand, within MPMX20_02738 at 2893.383 kb on + strand at 2893.383 kb on + strand at 2893.391 kb on - strand at 2893.429 kb on - strand at 2893.514 kb on + strand, within MPMX20_02739 at 2893.518 kb on - strand, within MPMX20_02739 at 2893.520 kb on + strand, within MPMX20_02739 at 2893.530 kb on + strand, within MPMX20_02739 at 2893.537 kb on + strand, within MPMX20_02739 at 2893.537 kb on + strand, within MPMX20_02739 at 2893.545 kb on - strand, within MPMX20_02739 at 2893.548 kb on + strand, within MPMX20_02739 at 2893.556 kb on - strand, within MPMX20_02739 at 2893.641 kb on + strand, within MPMX20_02739 at 2893.643 kb on - strand, within MPMX20_02739 at 2893.643 kb on - strand, within MPMX20_02739 at 2893.649 kb on - strand, within MPMX20_02739 at 2893.678 kb on + strand, within MPMX20_02739 at 2893.690 kb on - strand, within MPMX20_02739 at 2893.690 kb on - strand, within MPMX20_02739 at 2893.743 kb on + strand, within MPMX20_02739 at 2893.777 kb on - strand, within MPMX20_02739 at 2893.793 kb on + strand, within MPMX20_02739 at 2893.793 kb on + strand, within MPMX20_02739 at 2893.801 kb on - strand, within MPMX20_02739 at 2893.809 kb on + strand, within MPMX20_02739 at 2893.814 kb on + strand, within MPMX20_02739 at 2893.816 kb on + strand, within MPMX20_02739 at 2893.816 kb on + strand, within MPMX20_02739 at 2893.816 kb on + strand, within MPMX20_02739 at 2893.817 kb on - strand, within MPMX20_02739 at 2893.817 kb on - strand, within MPMX20_02739 at 2893.854 kb on - strand, within MPMX20_02739 at 2893.854 kb on - strand, within MPMX20_02739 at 2893.854 kb on - strand, within MPMX20_02739 at 2893.864 kb on - strand, within MPMX20_02739 at 2893.879 kb on + strand, within MPMX20_02739 at 2893.885 kb on - strand, within MPMX20_02739 at 2893.887 kb on - strand, within MPMX20_02739 at 2893.887 kb on - strand, within MPMX20_02739 at 2893.905 kb on + strand at 2893.913 kb on - strand at 2893.991 kb on + strand at 2894.012 kb on + strand at 2894.020 kb on - strand at 2894.037 kb on - strand at 2894.047 kb on - strand at 2894.049 kb on + strand at 2894.066 kb on + strand at 2894.072 kb on - strand at 2894.074 kb on - strand at 2894.074 kb on - strand at 2894.133 kb on + strand at 2894.133 kb on + strand at 2894.133 kb on + strand at 2894.133 kb on + strand at 2894.141 kb on - strand at 2894.141 kb on - strand at 2894.141 kb on - strand at 2894.141 kb on - strand at 2894.141 kb on - strand at 2894.141 kb on - strand at 2894.141 kb on - strand at 2894.158 kb on + strand at 2894.164 kb on - strand at 2894.233 kb on - strand, within MPMX20_02740 at 2894.285 kb on + strand, within MPMX20_02740 at 2894.329 kb on - strand, within MPMX20_02740 at 2894.379 kb on - strand, within MPMX20_02740 at 2894.384 kb on - strand, within MPMX20_02740 at 2894.430 kb on + strand, within MPMX20_02740 at 2894.435 kb on + strand, within MPMX20_02740 at 2894.435 kb on + strand, within MPMX20_02740 at 2894.523 kb on + strand, within MPMX20_02740 at 2894.569 kb on + strand, within MPMX20_02740 at 2894.581 kb on + strand, within MPMX20_02740 at 2894.604 kb on + strand, within MPMX20_02740 at 2894.604 kb on + strand, within MPMX20_02740 at 2894.612 kb on - strand, within MPMX20_02740 at 2894.612 kb on - strand, within MPMX20_02740 at 2894.632 kb on + strand, within MPMX20_02740 at 2894.632 kb on + strand, within MPMX20_02740 at 2894.635 kb on - strand, within MPMX20_02740 at 2894.635 kb on - strand, within MPMX20_02740 at 2894.635 kb on - strand, within MPMX20_02740 at 2894.661 kb on + strand, within MPMX20_02740 at 2894.674 kb on + strand, within MPMX20_02740 at 2894.675 kb on + strand, within MPMX20_02740 at 2894.682 kb on - strand, within MPMX20_02740 at 2894.688 kb on + strand, within MPMX20_02740 at 2894.705 kb on + strand, within MPMX20_02740 at 2894.705 kb on + strand, within MPMX20_02740 at 2894.717 kb on + strand, within MPMX20_02740 at 2894.717 kb on + strand, within MPMX20_02740 at 2894.717 kb on + strand, within MPMX20_02740 at 2894.725 kb on - strand, within MPMX20_02740 at 2894.725 kb on - strand, within MPMX20_02740 at 2894.725 kb on - strand, within MPMX20_02740 at 2894.725 kb on - strand, within MPMX20_02740 at 2894.765 kb on - strand, within MPMX20_02740 at 2894.770 kb on - strand, within MPMX20_02740 at 2894.782 kb on + strand, within MPMX20_02740 at 2894.782 kb on + strand, within MPMX20_02740 at 2894.790 kb on - strand, within MPMX20_02740 at 2894.795 kb on - strand, within MPMX20_02740 at 2894.821 kb on + strand, within MPMX20_02740 at 2894.821 kb on + strand, within MPMX20_02740 at 2894.827 kb on - strand, within MPMX20_02740 at 2894.838 kb on - strand, within MPMX20_02740 at 2894.858 kb on + strand, within MPMX20_02740 at 2894.991 kb on - strand, within MPMX20_02740 at 2894.993 kb on + strand, within MPMX20_02740 at 2894.996 kb on - strand, within MPMX20_02740 at 2894.998 kb on + strand, within MPMX20_02740 at 2895.031 kb on + strand, within MPMX20_02740 at 2895.064 kb on + strand, within MPMX20_02740 at 2895.072 kb on - strand, within MPMX20_02740 at 2895.072 kb on - strand, within MPMX20_02740 at 2895.072 kb on - strand, within MPMX20_02740 at 2895.072 kb on - strand, within MPMX20_02740 at 2895.072 kb on - strand, within MPMX20_02740 at 2895.072 kb on - strand, within MPMX20_02740 at 2895.082 kb on - strand, within MPMX20_02740 at 2895.089 kb on + strand, within MPMX20_02740 at 2895.089 kb on + strand, within MPMX20_02740 at 2895.089 kb on + strand, within MPMX20_02740 at 2895.089 kb on + strand, within MPMX20_02740 at 2895.089 kb on + strand, within MPMX20_02740 at 2895.097 kb on - strand, within MPMX20_02740 at 2895.097 kb on - strand, within MPMX20_02740 at 2895.097 kb on - strand, within MPMX20_02740 at 2895.205 kb on + strand, within MPMX20_02740 at 2895.215 kb on + strand, within MPMX20_02740 at 2895.378 kb on + strand at 2895.409 kb on + strand at 2895.417 kb on - strand at 2895.451 kb on + strand at 2895.494 kb on + strand at 2895.530 kb on + strand at 2895.530 kb on + strand at 2895.537 kb on + strand at 2895.538 kb on - strand at 2895.608 kb on - strand, within MPMX20_02741 at 2895.608 kb on - strand, within MPMX20_02741 at 2895.642 kb on + strand, within MPMX20_02741 at 2895.651 kb on + strand, within MPMX20_02741 at 2895.656 kb on + strand, within MPMX20_02741 at 2895.658 kb on + strand, within MPMX20_02741 at 2895.685 kb on + strand, within MPMX20_02741 at 2895.719 kb on + strand, within MPMX20_02741 at 2895.729 kb on + strand, within MPMX20_02741 at 2895.729 kb on + strand, within MPMX20_02741 at 2895.729 kb on + strand, within MPMX20_02741 at 2895.729 kb on + strand, within MPMX20_02741 at 2895.737 kb on - strand, within MPMX20_02741 at 2895.783 kb on - strand, within MPMX20_02741 at 2895.837 kb on + strand, within MPMX20_02741 at 2895.837 kb on + strand, within MPMX20_02741 at 2895.845 kb on - strand, within MPMX20_02741 at 2896.000 kb on - strand, within MPMX20_02741 at 2896.033 kb on - strand, within MPMX20_02741 at 2896.059 kb on + strand, within MPMX20_02741 at 2896.067 kb on - strand, within MPMX20_02741 at 2896.067 kb on - strand, within MPMX20_02741 at 2896.138 kb on + strand, within MPMX20_02741 at 2896.153 kb on - strand, within MPMX20_02741 at 2896.187 kb on + strand, within MPMX20_02741 at 2896.195 kb on - strand, within MPMX20_02741 at 2896.216 kb on - strand, within MPMX20_02741 at 2896.251 kb on + strand, within MPMX20_02741
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 2,893,078 + MPMX20_02738 0.61 +0.7 2,893,133 + MPMX20_02738 0.69 -2.1 2,893,133 + MPMX20_02738 0.69 -1.6 2,893,133 + MPMX20_02738 0.69 -1.9 2,893,141 - MPMX20_02738 0.70 -0.6 2,893,141 - MPMX20_02738 0.70 -1.2 2,893,141 - MPMX20_02738 0.70 +0.1 2,893,141 - MPMX20_02738 0.70 -0.7 2,893,141 - MPMX20_02738 0.70 -3.3 2,893,152 + MPMX20_02738 0.72 +0.7 2,893,190 + MPMX20_02738 0.78 -2.3 2,893,251 + MPMX20_02738 0.86 -1.4 2,893,259 - MPMX20_02738 0.88 +1.2 2,893,267 + MPMX20_02738 0.89 -1.3 2,893,383 + +0.5 2,893,383 + +0.3 2,893,391 - +0.9 2,893,429 - -1.3 2,893,514 + MPMX20_02739 0.15 +0.5 2,893,518 - MPMX20_02739 0.16 +0.2 2,893,520 + MPMX20_02739 0.16 -0.4 2,893,530 + MPMX20_02739 0.18 -1.2 2,893,537 + MPMX20_02739 0.19 -0.0 2,893,537 + MPMX20_02739 0.19 +0.7 2,893,545 - MPMX20_02739 0.21 +0.3 2,893,548 + MPMX20_02739 0.22 -0.2 2,893,556 - MPMX20_02739 0.23 +0.7 2,893,641 + MPMX20_02739 0.40 -0.2 2,893,643 - MPMX20_02739 0.41 +0.5 2,893,643 - MPMX20_02739 0.41 +0.8 2,893,649 - MPMX20_02739 0.42 +0.9 2,893,678 + MPMX20_02739 0.48 -0.3 2,893,690 - MPMX20_02739 0.50 -0.2 2,893,690 - MPMX20_02739 0.50 -0.1 2,893,743 + MPMX20_02739 0.61 +1.3 2,893,777 - MPMX20_02739 0.68 -0.9 2,893,793 + MPMX20_02739 0.71 +1.6 2,893,793 + MPMX20_02739 0.71 +2.0 2,893,801 - MPMX20_02739 0.72 -1.6 2,893,809 + MPMX20_02739 0.74 +0.4 2,893,814 + MPMX20_02739 0.75 -0.2 2,893,816 + MPMX20_02739 0.76 -0.7 2,893,816 + MPMX20_02739 0.76 +0.1 2,893,816 + MPMX20_02739 0.76 +0.9 2,893,817 - MPMX20_02739 0.76 -0.9 2,893,817 - MPMX20_02739 0.76 -0.3 2,893,854 - MPMX20_02739 0.83 +0.4 2,893,854 - MPMX20_02739 0.83 +0.5 2,893,854 - MPMX20_02739 0.83 +1.1 2,893,864 - MPMX20_02739 0.85 +2.0 2,893,879 + MPMX20_02739 0.88 +0.7 2,893,885 - MPMX20_02739 0.89 +1.3 2,893,887 - MPMX20_02739 0.90 -3.1 2,893,887 - MPMX20_02739 0.90 -0.1 2,893,905 + +0.0 2,893,913 - +1.0 2,893,991 + -0.5 2,894,012 + -0.5 2,894,020 - -0.3 2,894,037 - -0.8 2,894,047 - -0.0 2,894,049 + +0.1 2,894,066 + +1.3 2,894,072 - +1.2 2,894,074 - -0.4 2,894,074 - +0.7 2,894,133 + +0.8 2,894,133 + +0.4 2,894,133 + +2.3 2,894,133 + +0.1 2,894,141 - +0.3 2,894,141 - -0.4 2,894,141 - -0.3 2,894,141 - +0.7 2,894,141 - -2.3 2,894,141 - -0.7 2,894,141 - -0.4 2,894,158 + -0.2 2,894,164 - +0.1 2,894,233 - MPMX20_02740 0.13 -1.9 2,894,285 + MPMX20_02740 0.17 +0.4 2,894,329 - MPMX20_02740 0.20 +0.4 2,894,379 - MPMX20_02740 0.24 +0.5 2,894,384 - MPMX20_02740 0.24 +0.5 2,894,430 + MPMX20_02740 0.28 +0.1 2,894,435 + MPMX20_02740 0.28 -0.7 2,894,435 + MPMX20_02740 0.28 +0.6 2,894,523 + MPMX20_02740 0.35 -0.9 2,894,569 + MPMX20_02740 0.39 +0.0 2,894,581 + MPMX20_02740 0.40 +0.2 2,894,604 + MPMX20_02740 0.42 +0.1 2,894,604 + MPMX20_02740 0.42 -0.3 2,894,612 - MPMX20_02740 0.42 -1.3 2,894,612 - MPMX20_02740 0.42 -0.7 2,894,632 + MPMX20_02740 0.44 -1.3 2,894,632 + MPMX20_02740 0.44 +0.8 2,894,635 - MPMX20_02740 0.44 +0.0 2,894,635 - MPMX20_02740 0.44 -2.1 2,894,635 - MPMX20_02740 0.44 -4.0 2,894,661 + MPMX20_02740 0.46 -0.4 2,894,674 + MPMX20_02740 0.47 +0.6 2,894,675 + MPMX20_02740 0.47 -2.4 2,894,682 - MPMX20_02740 0.48 -1.0 2,894,688 + MPMX20_02740 0.48 -0.1 2,894,705 + MPMX20_02740 0.49 +1.9 2,894,705 + MPMX20_02740 0.49 -1.3 2,894,717 + MPMX20_02740 0.50 +0.1 2,894,717 + MPMX20_02740 0.50 +0.4 2,894,717 + MPMX20_02740 0.50 -1.9 2,894,725 - MPMX20_02740 0.51 +1.6 2,894,725 - MPMX20_02740 0.51 -0.3 2,894,725 - MPMX20_02740 0.51 -1.3 2,894,725 - MPMX20_02740 0.51 +0.0 2,894,765 - MPMX20_02740 0.54 +1.4 2,894,770 - MPMX20_02740 0.55 -1.5 2,894,782 + MPMX20_02740 0.55 -0.2 2,894,782 + MPMX20_02740 0.55 +0.2 2,894,790 - MPMX20_02740 0.56 -0.6 2,894,795 - MPMX20_02740 0.56 +0.6 2,894,821 + MPMX20_02740 0.58 +0.4 2,894,821 + MPMX20_02740 0.58 +0.6 2,894,827 - MPMX20_02740 0.59 -0.5 2,894,838 - MPMX20_02740 0.60 -0.3 2,894,858 + MPMX20_02740 0.61 -0.5 2,894,991 - MPMX20_02740 0.72 -1.6 2,894,993 + MPMX20_02740 0.72 +1.1 2,894,996 - MPMX20_02740 0.72 -0.6 2,894,998 + MPMX20_02740 0.72 -2.2 2,895,031 + MPMX20_02740 0.75 -0.3 2,895,064 + MPMX20_02740 0.77 +1.0 2,895,072 - MPMX20_02740 0.78 -0.1 2,895,072 - MPMX20_02740 0.78 +1.4 2,895,072 - MPMX20_02740 0.78 -1.6 2,895,072 - MPMX20_02740 0.78 -1.1 2,895,072 - MPMX20_02740 0.78 -1.9 2,895,072 - MPMX20_02740 0.78 +0.7 2,895,082 - MPMX20_02740 0.79 -1.1 2,895,089 + MPMX20_02740 0.79 +0.3 2,895,089 + MPMX20_02740 0.79 +0.3 2,895,089 + MPMX20_02740 0.79 +0.6 2,895,089 + MPMX20_02740 0.79 +0.3 2,895,089 + MPMX20_02740 0.79 +0.6 2,895,097 - MPMX20_02740 0.80 -0.9 2,895,097 - MPMX20_02740 0.80 -1.1 2,895,097 - MPMX20_02740 0.80 +0.4 2,895,205 + MPMX20_02740 0.88 +0.3 2,895,215 + MPMX20_02740 0.89 -1.9 2,895,378 + +0.6 2,895,409 + -1.6 2,895,417 - +0.5 2,895,451 + +2.4 2,895,494 + -0.2 2,895,530 + -0.8 2,895,530 + +0.8 2,895,537 + +0.2 2,895,538 - -1.2 2,895,608 - MPMX20_02741 0.11 +0.3 2,895,608 - MPMX20_02741 0.11 -2.1 2,895,642 + MPMX20_02741 0.12 +1.2 2,895,651 + MPMX20_02741 0.12 -0.2 2,895,656 + MPMX20_02741 0.13 -0.0 2,895,658 + MPMX20_02741 0.13 +1.2 2,895,685 + MPMX20_02741 0.14 -0.7 2,895,719 + MPMX20_02741 0.15 +0.5 2,895,729 + MPMX20_02741 0.15 -0.6 2,895,729 + MPMX20_02741 0.15 -0.3 2,895,729 + MPMX20_02741 0.15 +1.3 2,895,729 + MPMX20_02741 0.15 +0.5 2,895,737 - MPMX20_02741 0.16 +0.4 2,895,783 - MPMX20_02741 0.18 +1.4 2,895,837 + MPMX20_02741 0.20 -0.3 2,895,837 + MPMX20_02741 0.20 +0.3 2,895,845 - MPMX20_02741 0.20 -2.1 2,896,000 - MPMX20_02741 0.26 +1.7 2,896,033 - MPMX20_02741 0.27 +0.8 2,896,059 + MPMX20_02741 0.28 +0.2 2,896,067 - MPMX20_02741 0.28 +1.9 2,896,067 - MPMX20_02741 0.28 -0.5 2,896,138 + MPMX20_02741 0.31 +0.8 2,896,153 - MPMX20_02741 0.32 +3.1 2,896,187 + MPMX20_02741 0.33 -0.1 2,896,195 - MPMX20_02741 0.33 +0.2 2,896,216 - MPMX20_02741 0.34 -1.9 2,896,251 + MPMX20_02741 0.35 -0.1
Or see this region's nucleotide sequence