Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02022

Experiment: L-Phenylalanine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_02021 and MPMX20_02022 are separated by 137 nucleotidesMPMX20_02022 and MPMX20_02023 are separated by 0 nucleotides MPMX20_02021: MPMX20_02021 - Fumarate hydratase class I, aerobic, at 2,112,194 to 2,113,840 _02021 MPMX20_02022: MPMX20_02022 - Fumarate hydratase class II, at 2,113,978 to 2,115,372 _02022 MPMX20_02023: MPMX20_02023 - DNA replication terminus site-binding protein, at 2,115,373 to 2,116,302 _02023 Position (kb) 2113 2114 2115 2116Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2113.139 kb on - strand, within MPMX20_02021at 2113.149 kb on - strand, within MPMX20_02021at 2113.220 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.285 kb on - strand, within MPMX20_02021at 2113.510 kb on - strand, within MPMX20_02021at 2113.543 kb on + strand, within MPMX20_02021at 2113.570 kb on - strand, within MPMX20_02021at 2113.629 kb on + strand, within MPMX20_02021at 2113.637 kb on - strand, within MPMX20_02021at 2113.683 kb on - strandat 2113.697 kb on - strandat 2113.760 kb on + strandat 2113.804 kb on + strandat 2113.931 kb on - strandat 2113.966 kb on - strandat 2113.966 kb on - strandat 2113.990 kb on - strandat 2114.012 kb on - strandat 2114.037 kb on + strandat 2114.037 kb on + strandat 2114.037 kb on + strandat 2114.037 kb on + strandat 2114.037 kb on + strandat 2114.045 kb on - strandat 2114.045 kb on - strandat 2114.045 kb on - strandat 2114.127 kb on + strand, within MPMX20_02022at 2114.135 kb on - strand, within MPMX20_02022at 2114.215 kb on + strand, within MPMX20_02022at 2114.328 kb on + strand, within MPMX20_02022at 2114.328 kb on + strand, within MPMX20_02022at 2114.365 kb on - strand, within MPMX20_02022at 2114.474 kb on - strand, within MPMX20_02022at 2114.486 kb on + strand, within MPMX20_02022at 2114.528 kb on - strand, within MPMX20_02022at 2114.534 kb on + strand, within MPMX20_02022at 2114.680 kb on + strand, within MPMX20_02022at 2114.680 kb on + strand, within MPMX20_02022at 2114.797 kb on - strand, within MPMX20_02022at 2114.815 kb on + strand, within MPMX20_02022at 2114.825 kb on - strand, within MPMX20_02022at 2114.825 kb on - strand, within MPMX20_02022at 2114.956 kb on - strand, within MPMX20_02022at 2114.964 kb on + strand, within MPMX20_02022at 2114.964 kb on + strand, within MPMX20_02022at 2114.978 kb on - strand, within MPMX20_02022at 2115.021 kb on - strand, within MPMX20_02022at 2115.041 kb on + strand, within MPMX20_02022at 2115.100 kb on - strand, within MPMX20_02022at 2115.130 kb on - strand, within MPMX20_02022at 2115.231 kb on + strand, within MPMX20_02022at 2115.239 kb on - strandat 2115.305 kb on - strandat 2115.312 kb on + strandat 2115.539 kb on - strand, within MPMX20_02023at 2115.598 kb on - strand, within MPMX20_02023at 2115.614 kb on + strand, within MPMX20_02023at 2115.647 kb on + strand, within MPMX20_02023at 2115.718 kb on + strand, within MPMX20_02023at 2115.821 kb on + strand, within MPMX20_02023at 2115.869 kb on + strand, within MPMX20_02023at 2115.898 kb on + strand, within MPMX20_02023at 2115.898 kb on + strand, within MPMX20_02023at 2115.906 kb on - strand, within MPMX20_02023at 2115.906 kb on - strand, within MPMX20_02023at 2115.906 kb on - strand, within MPMX20_02023at 2115.906 kb on - strand, within MPMX20_02023at 2115.906 kb on - strand, within MPMX20_02023at 2115.920 kb on - strand, within MPMX20_02023at 2115.920 kb on - strand, within MPMX20_02023at 2116.009 kb on + strand, within MPMX20_02023at 2116.017 kb on - strand, within MPMX20_02023at 2116.241 kb on - strandat 2116.361 kb on - strandat 2116.361 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (C)
remove
2,113,139 - MPMX20_02021 0.57 -0.4
2,113,149 - MPMX20_02021 0.58 -0.1
2,113,220 + MPMX20_02021 0.62 +0.8
2,113,277 + MPMX20_02021 0.66 +0.1
2,113,277 + MPMX20_02021 0.66 +0.5
2,113,277 + MPMX20_02021 0.66 -0.7
2,113,277 + MPMX20_02021 0.66 -2.8
2,113,277 + MPMX20_02021 0.66 +0.1
2,113,277 + MPMX20_02021 0.66 -0.2
2,113,285 - MPMX20_02021 0.66 -1.0
2,113,510 - MPMX20_02021 0.80 -0.0
2,113,543 + MPMX20_02021 0.82 +0.3
2,113,570 - MPMX20_02021 0.84 -3.0
2,113,629 + MPMX20_02021 0.87 +0.9
2,113,637 - MPMX20_02021 0.88 -1.7
2,113,683 - -3.1
2,113,697 - -1.3
2,113,760 + +1.2
2,113,804 + -0.4
2,113,931 - -2.1
2,113,966 - +1.7
2,113,966 - +0.7
2,113,990 - -0.3
2,114,012 - +0.6
2,114,037 + -2.0
2,114,037 + +2.5
2,114,037 + -0.5
2,114,037 + +1.1
2,114,037 + -1.0
2,114,045 - +0.7
2,114,045 - +0.3
2,114,045 - -1.3
2,114,127 + MPMX20_02022 0.11 +1.4
2,114,135 - MPMX20_02022 0.11 -0.5
2,114,215 + MPMX20_02022 0.17 -3.0
2,114,328 + MPMX20_02022 0.25 -0.1
2,114,328 + MPMX20_02022 0.25 +1.5
2,114,365 - MPMX20_02022 0.28 +0.8
2,114,474 - MPMX20_02022 0.36 -2.1
2,114,486 + MPMX20_02022 0.36 -0.3
2,114,528 - MPMX20_02022 0.39 -0.5
2,114,534 + MPMX20_02022 0.40 +0.3
2,114,680 + MPMX20_02022 0.50 +0.2
2,114,680 + MPMX20_02022 0.50 +1.6
2,114,797 - MPMX20_02022 0.59 -0.7
2,114,815 + MPMX20_02022 0.60 -2.4
2,114,825 - MPMX20_02022 0.61 -0.3
2,114,825 - MPMX20_02022 0.61 -0.8
2,114,956 - MPMX20_02022 0.70 -0.4
2,114,964 + MPMX20_02022 0.71 +0.7
2,114,964 + MPMX20_02022 0.71 -2.0
2,114,978 - MPMX20_02022 0.72 -0.1
2,115,021 - MPMX20_02022 0.75 +0.5
2,115,041 + MPMX20_02022 0.76 +0.3
2,115,100 - MPMX20_02022 0.80 -0.9
2,115,130 - MPMX20_02022 0.83 +0.3
2,115,231 + MPMX20_02022 0.90 -2.8
2,115,239 - -0.7
2,115,305 - +0.7
2,115,312 + -0.3
2,115,539 - MPMX20_02023 0.18 +1.3
2,115,598 - MPMX20_02023 0.24 -0.3
2,115,614 + MPMX20_02023 0.26 -0.9
2,115,647 + MPMX20_02023 0.29 +0.3
2,115,718 + MPMX20_02023 0.37 +1.0
2,115,821 + MPMX20_02023 0.48 -1.0
2,115,869 + MPMX20_02023 0.53 -0.8
2,115,898 + MPMX20_02023 0.56 -0.6
2,115,898 + MPMX20_02023 0.56 -0.3
2,115,906 - MPMX20_02023 0.57 +0.7
2,115,906 - MPMX20_02023 0.57 -1.1
2,115,906 - MPMX20_02023 0.57 +1.0
2,115,906 - MPMX20_02023 0.57 -4.1
2,115,906 - MPMX20_02023 0.57 -0.0
2,115,920 - MPMX20_02023 0.59 +0.1
2,115,920 - MPMX20_02023 0.59 +0.6
2,116,009 + MPMX20_02023 0.68 -0.5
2,116,017 - MPMX20_02023 0.69 -1.8
2,116,241 - -1.8
2,116,361 - +2.3
2,116,361 - -1.5

Or see this region's nucleotide sequence