Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02021 and MPMX20_02022 are separated by 137 nucleotides MPMX20_02022 and MPMX20_02023 are separated by 0 nucleotides
MPMX20_02021: MPMX20_02021 - Fumarate hydratase class I, aerobic, at 2,112,194 to 2,113,840
_02021
MPMX20_02022: MPMX20_02022 - Fumarate hydratase class II, at 2,113,978 to 2,115,372
_02022
MPMX20_02023: MPMX20_02023 - DNA replication terminus site-binding protein, at 2,115,373 to 2,116,302
_02023
Position (kb)
2113
2114
2115
2116 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2113.139 kb on - strand, within MPMX20_02021 at 2113.149 kb on - strand, within MPMX20_02021 at 2113.220 kb on + strand, within MPMX20_02021 at 2113.277 kb on + strand, within MPMX20_02021 at 2113.277 kb on + strand, within MPMX20_02021 at 2113.277 kb on + strand, within MPMX20_02021 at 2113.277 kb on + strand, within MPMX20_02021 at 2113.277 kb on + strand, within MPMX20_02021 at 2113.277 kb on + strand, within MPMX20_02021 at 2113.285 kb on - strand, within MPMX20_02021 at 2113.510 kb on - strand, within MPMX20_02021 at 2113.543 kb on + strand, within MPMX20_02021 at 2113.570 kb on - strand, within MPMX20_02021 at 2113.629 kb on + strand, within MPMX20_02021 at 2113.637 kb on - strand, within MPMX20_02021 at 2113.683 kb on - strand at 2113.697 kb on - strand at 2113.760 kb on + strand at 2113.804 kb on + strand at 2113.931 kb on - strand at 2113.966 kb on - strand at 2113.966 kb on - strand at 2113.990 kb on - strand at 2114.012 kb on - strand at 2114.037 kb on + strand at 2114.037 kb on + strand at 2114.037 kb on + strand at 2114.037 kb on + strand at 2114.037 kb on + strand at 2114.045 kb on - strand at 2114.045 kb on - strand at 2114.045 kb on - strand at 2114.127 kb on + strand, within MPMX20_02022 at 2114.135 kb on - strand, within MPMX20_02022 at 2114.215 kb on + strand, within MPMX20_02022 at 2114.328 kb on + strand, within MPMX20_02022 at 2114.328 kb on + strand, within MPMX20_02022 at 2114.365 kb on - strand, within MPMX20_02022 at 2114.474 kb on - strand, within MPMX20_02022 at 2114.486 kb on + strand, within MPMX20_02022 at 2114.528 kb on - strand, within MPMX20_02022 at 2114.534 kb on + strand, within MPMX20_02022 at 2114.680 kb on + strand, within MPMX20_02022 at 2114.680 kb on + strand, within MPMX20_02022 at 2114.797 kb on - strand, within MPMX20_02022 at 2114.815 kb on + strand, within MPMX20_02022 at 2114.825 kb on - strand, within MPMX20_02022 at 2114.825 kb on - strand, within MPMX20_02022 at 2114.956 kb on - strand, within MPMX20_02022 at 2114.964 kb on + strand, within MPMX20_02022 at 2114.964 kb on + strand, within MPMX20_02022 at 2114.978 kb on - strand, within MPMX20_02022 at 2115.021 kb on - strand, within MPMX20_02022 at 2115.041 kb on + strand, within MPMX20_02022 at 2115.100 kb on - strand, within MPMX20_02022 at 2115.130 kb on - strand, within MPMX20_02022 at 2115.231 kb on + strand, within MPMX20_02022 at 2115.239 kb on - strand at 2115.305 kb on - strand at 2115.312 kb on + strand at 2115.539 kb on - strand, within MPMX20_02023 at 2115.598 kb on - strand, within MPMX20_02023 at 2115.614 kb on + strand, within MPMX20_02023 at 2115.647 kb on + strand, within MPMX20_02023 at 2115.718 kb on + strand, within MPMX20_02023 at 2115.821 kb on + strand, within MPMX20_02023 at 2115.869 kb on + strand, within MPMX20_02023 at 2115.898 kb on + strand, within MPMX20_02023 at 2115.898 kb on + strand, within MPMX20_02023 at 2115.906 kb on - strand, within MPMX20_02023 at 2115.906 kb on - strand, within MPMX20_02023 at 2115.906 kb on - strand, within MPMX20_02023 at 2115.906 kb on - strand, within MPMX20_02023 at 2115.906 kb on - strand, within MPMX20_02023 at 2115.920 kb on - strand, within MPMX20_02023 at 2115.920 kb on - strand, within MPMX20_02023 at 2116.009 kb on + strand, within MPMX20_02023 at 2116.017 kb on - strand, within MPMX20_02023 at 2116.241 kb on - strand at 2116.361 kb on - strand at 2116.361 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 2,113,139 - MPMX20_02021 0.57 -0.4 2,113,149 - MPMX20_02021 0.58 -0.1 2,113,220 + MPMX20_02021 0.62 +0.8 2,113,277 + MPMX20_02021 0.66 +0.1 2,113,277 + MPMX20_02021 0.66 +0.5 2,113,277 + MPMX20_02021 0.66 -0.7 2,113,277 + MPMX20_02021 0.66 -2.8 2,113,277 + MPMX20_02021 0.66 +0.1 2,113,277 + MPMX20_02021 0.66 -0.2 2,113,285 - MPMX20_02021 0.66 -1.0 2,113,510 - MPMX20_02021 0.80 -0.0 2,113,543 + MPMX20_02021 0.82 +0.3 2,113,570 - MPMX20_02021 0.84 -3.0 2,113,629 + MPMX20_02021 0.87 +0.9 2,113,637 - MPMX20_02021 0.88 -1.7 2,113,683 - -3.1 2,113,697 - -1.3 2,113,760 + +1.2 2,113,804 + -0.4 2,113,931 - -2.1 2,113,966 - +1.7 2,113,966 - +0.7 2,113,990 - -0.3 2,114,012 - +0.6 2,114,037 + -2.0 2,114,037 + +2.5 2,114,037 + -0.5 2,114,037 + +1.1 2,114,037 + -1.0 2,114,045 - +0.7 2,114,045 - +0.3 2,114,045 - -1.3 2,114,127 + MPMX20_02022 0.11 +1.4 2,114,135 - MPMX20_02022 0.11 -0.5 2,114,215 + MPMX20_02022 0.17 -3.0 2,114,328 + MPMX20_02022 0.25 -0.1 2,114,328 + MPMX20_02022 0.25 +1.5 2,114,365 - MPMX20_02022 0.28 +0.8 2,114,474 - MPMX20_02022 0.36 -2.1 2,114,486 + MPMX20_02022 0.36 -0.3 2,114,528 - MPMX20_02022 0.39 -0.5 2,114,534 + MPMX20_02022 0.40 +0.3 2,114,680 + MPMX20_02022 0.50 +0.2 2,114,680 + MPMX20_02022 0.50 +1.6 2,114,797 - MPMX20_02022 0.59 -0.7 2,114,815 + MPMX20_02022 0.60 -2.4 2,114,825 - MPMX20_02022 0.61 -0.3 2,114,825 - MPMX20_02022 0.61 -0.8 2,114,956 - MPMX20_02022 0.70 -0.4 2,114,964 + MPMX20_02022 0.71 +0.7 2,114,964 + MPMX20_02022 0.71 -2.0 2,114,978 - MPMX20_02022 0.72 -0.1 2,115,021 - MPMX20_02022 0.75 +0.5 2,115,041 + MPMX20_02022 0.76 +0.3 2,115,100 - MPMX20_02022 0.80 -0.9 2,115,130 - MPMX20_02022 0.83 +0.3 2,115,231 + MPMX20_02022 0.90 -2.8 2,115,239 - -0.7 2,115,305 - +0.7 2,115,312 + -0.3 2,115,539 - MPMX20_02023 0.18 +1.3 2,115,598 - MPMX20_02023 0.24 -0.3 2,115,614 + MPMX20_02023 0.26 -0.9 2,115,647 + MPMX20_02023 0.29 +0.3 2,115,718 + MPMX20_02023 0.37 +1.0 2,115,821 + MPMX20_02023 0.48 -1.0 2,115,869 + MPMX20_02023 0.53 -0.8 2,115,898 + MPMX20_02023 0.56 -0.6 2,115,898 + MPMX20_02023 0.56 -0.3 2,115,906 - MPMX20_02023 0.57 +0.7 2,115,906 - MPMX20_02023 0.57 -1.1 2,115,906 - MPMX20_02023 0.57 +1.0 2,115,906 - MPMX20_02023 0.57 -4.1 2,115,906 - MPMX20_02023 0.57 -0.0 2,115,920 - MPMX20_02023 0.59 +0.1 2,115,920 - MPMX20_02023 0.59 +0.6 2,116,009 + MPMX20_02023 0.68 -0.5 2,116,017 - MPMX20_02023 0.69 -1.8 2,116,241 - -1.8 2,116,361 - +2.3 2,116,361 - -1.5
Or see this region's nucleotide sequence