Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01982 and MPMX20_01983 are separated by 339 nucleotides MPMX20_01983 and MPMX20_01984 are separated by 45 nucleotides MPMX20_01984 and MPMX20_01985 are separated by 96 nucleotides MPMX20_01985 and MPMX20_01986 are separated by 100 nucleotides
MPMX20_01982: MPMX20_01982 - Murein DD-endopeptidase MepH, at 2,073,397 to 2,074,170
_01982
MPMX20_01983: MPMX20_01983 - Glutaredoxin 4, at 2,074,510 to 2,074,857
_01983
MPMX20_01984: MPMX20_01984 - Ribonuclease T, at 2,074,903 to 2,075,553
_01984
MPMX20_01985: MPMX20_01985 - Lactoylglutathione lyase, at 2,075,650 to 2,076,057
_01985
MPMX20_01986: MPMX20_01986 - N-ethylmaleimide reductase, at 2,076,158 to 2,077,255
_01986
Position (kb)
2074
2075
2076 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2073.933 kb on - strand, within MPMX20_01982 at 2073.969 kb on - strand, within MPMX20_01982 at 2073.984 kb on + strand, within MPMX20_01982 at 2074.062 kb on + strand, within MPMX20_01982 at 2074.075 kb on - strand, within MPMX20_01982 at 2074.080 kb on + strand, within MPMX20_01982 at 2074.083 kb on + strand, within MPMX20_01982 at 2074.083 kb on + strand, within MPMX20_01982 at 2074.083 kb on + strand, within MPMX20_01982 at 2074.083 kb on + strand, within MPMX20_01982 at 2074.083 kb on + strand, within MPMX20_01982 at 2074.091 kb on + strand, within MPMX20_01982 at 2074.091 kb on - strand, within MPMX20_01982 at 2074.091 kb on - strand, within MPMX20_01982 at 2074.091 kb on - strand, within MPMX20_01982 at 2074.091 kb on - strand, within MPMX20_01982 at 2074.091 kb on - strand, within MPMX20_01982 at 2074.101 kb on - strand at 2074.104 kb on + strand at 2074.111 kb on + strand at 2074.111 kb on + strand at 2074.112 kb on - strand at 2074.126 kb on + strand at 2074.126 kb on + strand at 2074.126 kb on + strand at 2074.126 kb on - strand at 2074.128 kb on + strand at 2074.128 kb on + strand at 2074.128 kb on + strand at 2074.128 kb on + strand at 2074.128 kb on + strand at 2074.133 kb on + strand at 2074.134 kb on - strand at 2074.167 kb on + strand at 2074.167 kb on + strand at 2074.167 kb on + strand at 2074.172 kb on + strand at 2074.175 kb on - strand at 2074.175 kb on - strand at 2074.175 kb on - strand at 2074.179 kb on + strand at 2074.184 kb on + strand at 2074.192 kb on - strand at 2074.279 kb on + strand at 2074.287 kb on - strand at 2074.287 kb on - strand at 2074.332 kb on + strand at 2074.332 kb on + strand at 2074.340 kb on - strand at 2074.340 kb on - strand at 2074.368 kb on + strand at 2074.376 kb on - strand at 2074.376 kb on - strand at 2074.421 kb on - strand at 2074.452 kb on + strand at 2074.460 kb on - strand at 2074.474 kb on + strand at 2074.474 kb on + strand at 2074.577 kb on - strand, within MPMX20_01983 at 2074.595 kb on + strand, within MPMX20_01983 at 2074.595 kb on + strand, within MPMX20_01983 at 2074.602 kb on - strand, within MPMX20_01983 at 2074.603 kb on - strand, within MPMX20_01983 at 2074.626 kb on - strand, within MPMX20_01983 at 2074.680 kb on + strand, within MPMX20_01983 at 2074.681 kb on - strand, within MPMX20_01983 at 2074.688 kb on - strand, within MPMX20_01983 at 2074.703 kb on - strand, within MPMX20_01983 at 2074.712 kb on + strand, within MPMX20_01983 at 2074.728 kb on + strand, within MPMX20_01983 at 2074.728 kb on + strand, within MPMX20_01983 at 2074.736 kb on - strand, within MPMX20_01983 at 2074.736 kb on - strand, within MPMX20_01983 at 2074.736 kb on - strand, within MPMX20_01983 at 2074.747 kb on - strand, within MPMX20_01983 at 2074.749 kb on + strand, within MPMX20_01983 at 2074.757 kb on - strand, within MPMX20_01983 at 2074.937 kb on - strand at 2075.087 kb on - strand, within MPMX20_01984 at 2075.097 kb on - strand, within MPMX20_01984 at 2075.119 kb on - strand, within MPMX20_01984 at 2075.333 kb on + strand, within MPMX20_01984 at 2075.407 kb on - strand, within MPMX20_01984 at 2075.446 kb on - strand, within MPMX20_01984 at 2075.689 kb on - strand at 2075.733 kb on + strand, within MPMX20_01985 at 2075.803 kb on + strand, within MPMX20_01985 at 2075.849 kb on + strand, within MPMX20_01985 at 2075.856 kb on + strand, within MPMX20_01985 at 2075.856 kb on + strand, within MPMX20_01985 at 2075.864 kb on - strand, within MPMX20_01985 at 2075.864 kb on - strand, within MPMX20_01985 at 2075.864 kb on - strand, within MPMX20_01985 at 2075.864 kb on - strand, within MPMX20_01985 at 2075.976 kb on + strand, within MPMX20_01985 at 2075.976 kb on + strand, within MPMX20_01985 at 2075.994 kb on - strand, within MPMX20_01985 at 2076.106 kb on + strand at 2076.163 kb on + strand at 2076.163 kb on + strand at 2076.166 kb on - strand at 2076.171 kb on - strand at 2076.171 kb on - strand at 2076.171 kb on - strand at 2076.171 kb on - strand at 2076.216 kb on + strand at 2076.267 kb on - strand at 2076.344 kb on + strand, within MPMX20_01986 at 2076.352 kb on - strand, within MPMX20_01986 at 2076.369 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.441 kb on + strand, within MPMX20_01986 at 2076.449 kb on - strand, within MPMX20_01986 at 2076.487 kb on + strand, within MPMX20_01986 at 2076.495 kb on - strand, within MPMX20_01986 at 2076.518 kb on + strand, within MPMX20_01986
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 2,073,933 - MPMX20_01982 0.69 +1.3 2,073,969 - MPMX20_01982 0.74 +0.8 2,073,984 + MPMX20_01982 0.76 +0.5 2,074,062 + MPMX20_01982 0.86 +1.3 2,074,075 - MPMX20_01982 0.88 -0.2 2,074,080 + MPMX20_01982 0.88 +1.3 2,074,083 + MPMX20_01982 0.89 +0.3 2,074,083 + MPMX20_01982 0.89 +0.7 2,074,083 + MPMX20_01982 0.89 +0.5 2,074,083 + MPMX20_01982 0.89 +0.2 2,074,083 + MPMX20_01982 0.89 -1.2 2,074,091 + MPMX20_01982 0.90 -0.5 2,074,091 - MPMX20_01982 0.90 +1.2 2,074,091 - MPMX20_01982 0.90 -0.6 2,074,091 - MPMX20_01982 0.90 +1.0 2,074,091 - MPMX20_01982 0.90 -1.7 2,074,091 - MPMX20_01982 0.90 +0.9 2,074,101 - +1.0 2,074,104 + -1.1 2,074,111 + -0.6 2,074,111 + -0.4 2,074,112 - -1.1 2,074,126 + -1.4 2,074,126 + -0.3 2,074,126 + +0.3 2,074,126 - -1.0 2,074,128 + -0.2 2,074,128 + -1.9 2,074,128 + +0.7 2,074,128 + -0.3 2,074,128 + +1.5 2,074,133 + +1.6 2,074,134 - -0.6 2,074,167 + -0.2 2,074,167 + +1.7 2,074,167 + -0.4 2,074,172 + -0.7 2,074,175 - -0.5 2,074,175 - -2.9 2,074,175 - -0.3 2,074,179 + -1.0 2,074,184 + -3.2 2,074,192 - -0.7 2,074,279 + -0.0 2,074,287 - -3.6 2,074,287 - +0.9 2,074,332 + -0.8 2,074,332 + -2.3 2,074,340 - +2.2 2,074,340 - -0.9 2,074,368 + +0.7 2,074,376 - +0.1 2,074,376 - -0.0 2,074,421 - -0.4 2,074,452 + +2.4 2,074,460 - +0.6 2,074,474 + +0.1 2,074,474 + +0.9 2,074,577 - MPMX20_01983 0.19 -0.5 2,074,595 + MPMX20_01983 0.24 -0.3 2,074,595 + MPMX20_01983 0.24 +0.5 2,074,602 - MPMX20_01983 0.26 -2.0 2,074,603 - MPMX20_01983 0.27 +3.9 2,074,626 - MPMX20_01983 0.33 +1.5 2,074,680 + MPMX20_01983 0.49 +0.1 2,074,681 - MPMX20_01983 0.49 -1.5 2,074,688 - MPMX20_01983 0.51 +2.5 2,074,703 - MPMX20_01983 0.55 -2.8 2,074,712 + MPMX20_01983 0.58 -0.1 2,074,728 + MPMX20_01983 0.63 -0.1 2,074,728 + MPMX20_01983 0.63 +0.6 2,074,736 - MPMX20_01983 0.65 +0.1 2,074,736 - MPMX20_01983 0.65 +1.5 2,074,736 - MPMX20_01983 0.65 -0.0 2,074,747 - MPMX20_01983 0.68 -3.2 2,074,749 + MPMX20_01983 0.69 -0.0 2,074,757 - MPMX20_01983 0.71 +0.8 2,074,937 - -0.7 2,075,087 - MPMX20_01984 0.28 -2.4 2,075,097 - MPMX20_01984 0.30 -1.7 2,075,119 - MPMX20_01984 0.33 -1.5 2,075,333 + MPMX20_01984 0.66 +1.3 2,075,407 - MPMX20_01984 0.77 -2.4 2,075,446 - MPMX20_01984 0.83 -2.2 2,075,689 - -0.6 2,075,733 + MPMX20_01985 0.20 -1.3 2,075,803 + MPMX20_01985 0.38 -1.4 2,075,849 + MPMX20_01985 0.49 +1.0 2,075,856 + MPMX20_01985 0.50 -0.6 2,075,856 + MPMX20_01985 0.50 -1.1 2,075,864 - MPMX20_01985 0.52 -0.3 2,075,864 - MPMX20_01985 0.52 -0.0 2,075,864 - MPMX20_01985 0.52 -1.2 2,075,864 - MPMX20_01985 0.52 -0.7 2,075,976 + MPMX20_01985 0.80 -1.3 2,075,976 + MPMX20_01985 0.80 -3.4 2,075,994 - MPMX20_01985 0.84 -0.1 2,076,106 + -0.3 2,076,163 + -1.7 2,076,163 + +2.1 2,076,166 - -2.2 2,076,171 - -0.7 2,076,171 - +1.5 2,076,171 - -0.0 2,076,171 - +0.8 2,076,216 + +1.4 2,076,267 - -2.0 2,076,344 + MPMX20_01986 0.17 +0.5 2,076,352 - MPMX20_01986 0.18 +0.4 2,076,369 + MPMX20_01986 0.19 -0.8 2,076,408 + MPMX20_01986 0.23 +1.2 2,076,408 + MPMX20_01986 0.23 +0.0 2,076,408 + MPMX20_01986 0.23 +1.7 2,076,408 + MPMX20_01986 0.23 +0.1 2,076,408 + MPMX20_01986 0.23 +0.1 2,076,408 + MPMX20_01986 0.23 -0.9 2,076,416 - MPMX20_01986 0.23 -0.5 2,076,416 - MPMX20_01986 0.23 +0.2 2,076,416 - MPMX20_01986 0.23 +1.2 2,076,416 - MPMX20_01986 0.23 +0.8 2,076,416 - MPMX20_01986 0.23 -0.6 2,076,416 - MPMX20_01986 0.23 +1.5 2,076,441 + MPMX20_01986 0.26 +1.8 2,076,449 - MPMX20_01986 0.27 +0.3 2,076,487 + MPMX20_01986 0.30 -1.7 2,076,495 - MPMX20_01986 0.31 -1.2 2,076,518 + MPMX20_01986 0.33 +0.7
Or see this region's nucleotide sequence