Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01984

Experiment: L-Phenylalanine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01982 and MPMX20_01983 are separated by 339 nucleotidesMPMX20_01983 and MPMX20_01984 are separated by 45 nucleotidesMPMX20_01984 and MPMX20_01985 are separated by 96 nucleotidesMPMX20_01985 and MPMX20_01986 are separated by 100 nucleotides MPMX20_01982: MPMX20_01982 - Murein DD-endopeptidase MepH, at 2,073,397 to 2,074,170 _01982 MPMX20_01983: MPMX20_01983 - Glutaredoxin 4, at 2,074,510 to 2,074,857 _01983 MPMX20_01984: MPMX20_01984 - Ribonuclease T, at 2,074,903 to 2,075,553 _01984 MPMX20_01985: MPMX20_01985 - Lactoylglutathione lyase, at 2,075,650 to 2,076,057 _01985 MPMX20_01986: MPMX20_01986 - N-ethylmaleimide reductase, at 2,076,158 to 2,077,255 _01986 Position (kb) 2074 2075 2076Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2073.933 kb on - strand, within MPMX20_01982at 2073.969 kb on - strand, within MPMX20_01982at 2073.984 kb on + strand, within MPMX20_01982at 2074.062 kb on + strand, within MPMX20_01982at 2074.075 kb on - strand, within MPMX20_01982at 2074.080 kb on + strand, within MPMX20_01982at 2074.083 kb on + strand, within MPMX20_01982at 2074.083 kb on + strand, within MPMX20_01982at 2074.083 kb on + strand, within MPMX20_01982at 2074.083 kb on + strand, within MPMX20_01982at 2074.083 kb on + strand, within MPMX20_01982at 2074.091 kb on + strand, within MPMX20_01982at 2074.091 kb on - strand, within MPMX20_01982at 2074.091 kb on - strand, within MPMX20_01982at 2074.091 kb on - strand, within MPMX20_01982at 2074.091 kb on - strand, within MPMX20_01982at 2074.091 kb on - strand, within MPMX20_01982at 2074.101 kb on - strandat 2074.104 kb on + strandat 2074.111 kb on + strandat 2074.111 kb on + strandat 2074.112 kb on - strandat 2074.126 kb on + strandat 2074.126 kb on + strandat 2074.126 kb on + strandat 2074.126 kb on - strandat 2074.128 kb on + strandat 2074.128 kb on + strandat 2074.128 kb on + strandat 2074.128 kb on + strandat 2074.128 kb on + strandat 2074.133 kb on + strandat 2074.134 kb on - strandat 2074.167 kb on + strandat 2074.167 kb on + strandat 2074.167 kb on + strandat 2074.172 kb on + strandat 2074.175 kb on - strandat 2074.175 kb on - strandat 2074.175 kb on - strandat 2074.179 kb on + strandat 2074.184 kb on + strandat 2074.192 kb on - strandat 2074.279 kb on + strandat 2074.287 kb on - strandat 2074.287 kb on - strandat 2074.332 kb on + strandat 2074.332 kb on + strandat 2074.340 kb on - strandat 2074.340 kb on - strandat 2074.368 kb on + strandat 2074.376 kb on - strandat 2074.376 kb on - strandat 2074.421 kb on - strandat 2074.452 kb on + strandat 2074.460 kb on - strandat 2074.474 kb on + strandat 2074.474 kb on + strandat 2074.577 kb on - strand, within MPMX20_01983at 2074.595 kb on + strand, within MPMX20_01983at 2074.595 kb on + strand, within MPMX20_01983at 2074.602 kb on - strand, within MPMX20_01983at 2074.603 kb on - strand, within MPMX20_01983at 2074.626 kb on - strand, within MPMX20_01983at 2074.680 kb on + strand, within MPMX20_01983at 2074.681 kb on - strand, within MPMX20_01983at 2074.688 kb on - strand, within MPMX20_01983at 2074.703 kb on - strand, within MPMX20_01983at 2074.712 kb on + strand, within MPMX20_01983at 2074.728 kb on + strand, within MPMX20_01983at 2074.728 kb on + strand, within MPMX20_01983at 2074.736 kb on - strand, within MPMX20_01983at 2074.736 kb on - strand, within MPMX20_01983at 2074.736 kb on - strand, within MPMX20_01983at 2074.747 kb on - strand, within MPMX20_01983at 2074.749 kb on + strand, within MPMX20_01983at 2074.757 kb on - strand, within MPMX20_01983at 2074.937 kb on - strandat 2075.087 kb on - strand, within MPMX20_01984at 2075.097 kb on - strand, within MPMX20_01984at 2075.119 kb on - strand, within MPMX20_01984at 2075.333 kb on + strand, within MPMX20_01984at 2075.407 kb on - strand, within MPMX20_01984at 2075.446 kb on - strand, within MPMX20_01984at 2075.689 kb on - strandat 2075.733 kb on + strand, within MPMX20_01985at 2075.803 kb on + strand, within MPMX20_01985at 2075.849 kb on + strand, within MPMX20_01985at 2075.856 kb on + strand, within MPMX20_01985at 2075.856 kb on + strand, within MPMX20_01985at 2075.864 kb on - strand, within MPMX20_01985at 2075.864 kb on - strand, within MPMX20_01985at 2075.864 kb on - strand, within MPMX20_01985at 2075.864 kb on - strand, within MPMX20_01985at 2075.976 kb on + strand, within MPMX20_01985at 2075.976 kb on + strand, within MPMX20_01985at 2075.994 kb on - strand, within MPMX20_01985at 2076.106 kb on + strandat 2076.163 kb on + strandat 2076.163 kb on + strandat 2076.166 kb on - strandat 2076.171 kb on - strandat 2076.171 kb on - strandat 2076.171 kb on - strandat 2076.171 kb on - strandat 2076.216 kb on + strandat 2076.267 kb on - strandat 2076.344 kb on + strand, within MPMX20_01986at 2076.352 kb on - strand, within MPMX20_01986at 2076.369 kb on + strand, within MPMX20_01986at 2076.408 kb on + strand, within MPMX20_01986at 2076.408 kb on + strand, within MPMX20_01986at 2076.408 kb on + strand, within MPMX20_01986at 2076.408 kb on + strand, within MPMX20_01986at 2076.408 kb on + strand, within MPMX20_01986at 2076.408 kb on + strand, within MPMX20_01986at 2076.416 kb on - strand, within MPMX20_01986at 2076.416 kb on - strand, within MPMX20_01986at 2076.416 kb on - strand, within MPMX20_01986at 2076.416 kb on - strand, within MPMX20_01986at 2076.416 kb on - strand, within MPMX20_01986at 2076.416 kb on - strand, within MPMX20_01986at 2076.441 kb on + strand, within MPMX20_01986at 2076.449 kb on - strand, within MPMX20_01986at 2076.487 kb on + strand, within MPMX20_01986at 2076.495 kb on - strand, within MPMX20_01986at 2076.518 kb on + strand, within MPMX20_01986

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (C)
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2,073,933 - MPMX20_01982 0.69 +1.3
2,073,969 - MPMX20_01982 0.74 +0.8
2,073,984 + MPMX20_01982 0.76 +0.5
2,074,062 + MPMX20_01982 0.86 +1.3
2,074,075 - MPMX20_01982 0.88 -0.2
2,074,080 + MPMX20_01982 0.88 +1.3
2,074,083 + MPMX20_01982 0.89 +0.3
2,074,083 + MPMX20_01982 0.89 +0.7
2,074,083 + MPMX20_01982 0.89 +0.5
2,074,083 + MPMX20_01982 0.89 +0.2
2,074,083 + MPMX20_01982 0.89 -1.2
2,074,091 + MPMX20_01982 0.90 -0.5
2,074,091 - MPMX20_01982 0.90 +1.2
2,074,091 - MPMX20_01982 0.90 -0.6
2,074,091 - MPMX20_01982 0.90 +1.0
2,074,091 - MPMX20_01982 0.90 -1.7
2,074,091 - MPMX20_01982 0.90 +0.9
2,074,101 - +1.0
2,074,104 + -1.1
2,074,111 + -0.6
2,074,111 + -0.4
2,074,112 - -1.1
2,074,126 + -1.4
2,074,126 + -0.3
2,074,126 + +0.3
2,074,126 - -1.0
2,074,128 + -0.2
2,074,128 + -1.9
2,074,128 + +0.7
2,074,128 + -0.3
2,074,128 + +1.5
2,074,133 + +1.6
2,074,134 - -0.6
2,074,167 + -0.2
2,074,167 + +1.7
2,074,167 + -0.4
2,074,172 + -0.7
2,074,175 - -0.5
2,074,175 - -2.9
2,074,175 - -0.3
2,074,179 + -1.0
2,074,184 + -3.2
2,074,192 - -0.7
2,074,279 + -0.0
2,074,287 - -3.6
2,074,287 - +0.9
2,074,332 + -0.8
2,074,332 + -2.3
2,074,340 - +2.2
2,074,340 - -0.9
2,074,368 + +0.7
2,074,376 - +0.1
2,074,376 - -0.0
2,074,421 - -0.4
2,074,452 + +2.4
2,074,460 - +0.6
2,074,474 + +0.1
2,074,474 + +0.9
2,074,577 - MPMX20_01983 0.19 -0.5
2,074,595 + MPMX20_01983 0.24 -0.3
2,074,595 + MPMX20_01983 0.24 +0.5
2,074,602 - MPMX20_01983 0.26 -2.0
2,074,603 - MPMX20_01983 0.27 +3.9
2,074,626 - MPMX20_01983 0.33 +1.5
2,074,680 + MPMX20_01983 0.49 +0.1
2,074,681 - MPMX20_01983 0.49 -1.5
2,074,688 - MPMX20_01983 0.51 +2.5
2,074,703 - MPMX20_01983 0.55 -2.8
2,074,712 + MPMX20_01983 0.58 -0.1
2,074,728 + MPMX20_01983 0.63 -0.1
2,074,728 + MPMX20_01983 0.63 +0.6
2,074,736 - MPMX20_01983 0.65 +0.1
2,074,736 - MPMX20_01983 0.65 +1.5
2,074,736 - MPMX20_01983 0.65 -0.0
2,074,747 - MPMX20_01983 0.68 -3.2
2,074,749 + MPMX20_01983 0.69 -0.0
2,074,757 - MPMX20_01983 0.71 +0.8
2,074,937 - -0.7
2,075,087 - MPMX20_01984 0.28 -2.4
2,075,097 - MPMX20_01984 0.30 -1.7
2,075,119 - MPMX20_01984 0.33 -1.5
2,075,333 + MPMX20_01984 0.66 +1.3
2,075,407 - MPMX20_01984 0.77 -2.4
2,075,446 - MPMX20_01984 0.83 -2.2
2,075,689 - -0.6
2,075,733 + MPMX20_01985 0.20 -1.3
2,075,803 + MPMX20_01985 0.38 -1.4
2,075,849 + MPMX20_01985 0.49 +1.0
2,075,856 + MPMX20_01985 0.50 -0.6
2,075,856 + MPMX20_01985 0.50 -1.1
2,075,864 - MPMX20_01985 0.52 -0.3
2,075,864 - MPMX20_01985 0.52 -0.0
2,075,864 - MPMX20_01985 0.52 -1.2
2,075,864 - MPMX20_01985 0.52 -0.7
2,075,976 + MPMX20_01985 0.80 -1.3
2,075,976 + MPMX20_01985 0.80 -3.4
2,075,994 - MPMX20_01985 0.84 -0.1
2,076,106 + -0.3
2,076,163 + -1.7
2,076,163 + +2.1
2,076,166 - -2.2
2,076,171 - -0.7
2,076,171 - +1.5
2,076,171 - -0.0
2,076,171 - +0.8
2,076,216 + +1.4
2,076,267 - -2.0
2,076,344 + MPMX20_01986 0.17 +0.5
2,076,352 - MPMX20_01986 0.18 +0.4
2,076,369 + MPMX20_01986 0.19 -0.8
2,076,408 + MPMX20_01986 0.23 +1.2
2,076,408 + MPMX20_01986 0.23 +0.0
2,076,408 + MPMX20_01986 0.23 +1.7
2,076,408 + MPMX20_01986 0.23 +0.1
2,076,408 + MPMX20_01986 0.23 +0.1
2,076,408 + MPMX20_01986 0.23 -0.9
2,076,416 - MPMX20_01986 0.23 -0.5
2,076,416 - MPMX20_01986 0.23 +0.2
2,076,416 - MPMX20_01986 0.23 +1.2
2,076,416 - MPMX20_01986 0.23 +0.8
2,076,416 - MPMX20_01986 0.23 -0.6
2,076,416 - MPMX20_01986 0.23 +1.5
2,076,441 + MPMX20_01986 0.26 +1.8
2,076,449 - MPMX20_01986 0.27 +0.3
2,076,487 + MPMX20_01986 0.30 -1.7
2,076,495 - MPMX20_01986 0.31 -1.2
2,076,518 + MPMX20_01986 0.33 +0.7

Or see this region's nucleotide sequence