Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01799 and MPMX20_01800 are separated by 54 nucleotides MPMX20_01800 and MPMX20_01801 are separated by 14 nucleotides MPMX20_01801 and MPMX20_01802 are separated by 46 nucleotides
MPMX20_01799: MPMX20_01799 - Lipoprotein-releasing system transmembrane protein LolE, at 1,892,271 to 1,893,515
_01799
MPMX20_01800: MPMX20_01800 - N-acetyl-D-glucosamine kinase, at 1,893,570 to 1,894,481
_01800
MPMX20_01801: MPMX20_01801 - NAD-dependent protein deacylase, at 1,894,496 to 1,895,317
_01801
MPMX20_01802: MPMX20_01802 - hypothetical protein, at 1,895,364 to 1,897,295
_01802
Position (kb)
1894
1895
1896 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1893.601 kb on + strand at 1893.735 kb on + strand, within MPMX20_01800 at 1893.743 kb on - strand, within MPMX20_01800 at 1893.786 kb on + strand, within MPMX20_01800 at 1893.842 kb on + strand, within MPMX20_01800 at 1893.854 kb on + strand, within MPMX20_01800 at 1893.862 kb on - strand, within MPMX20_01800 at 1893.902 kb on + strand, within MPMX20_01800 at 1893.966 kb on + strand, within MPMX20_01800 at 1893.974 kb on - strand, within MPMX20_01800 at 1893.974 kb on - strand, within MPMX20_01800 at 1894.013 kb on + strand, within MPMX20_01800 at 1894.019 kb on + strand, within MPMX20_01800 at 1894.086 kb on + strand, within MPMX20_01800 at 1894.089 kb on - strand, within MPMX20_01800 at 1894.110 kb on + strand, within MPMX20_01800 at 1894.255 kb on + strand, within MPMX20_01800 at 1894.263 kb on - strand, within MPMX20_01800 at 1894.362 kb on - strand, within MPMX20_01800 at 1894.446 kb on - strand at 1894.498 kb on - strand at 1894.509 kb on + strand at 1894.514 kb on + strand at 1894.615 kb on + strand, within MPMX20_01801 at 1894.623 kb on - strand, within MPMX20_01801 at 1894.708 kb on - strand, within MPMX20_01801 at 1894.805 kb on - strand, within MPMX20_01801 at 1894.810 kb on + strand, within MPMX20_01801 at 1895.002 kb on + strand, within MPMX20_01801 at 1895.092 kb on + strand, within MPMX20_01801 at 1895.092 kb on + strand, within MPMX20_01801 at 1895.100 kb on - strand, within MPMX20_01801 at 1895.107 kb on + strand, within MPMX20_01801 at 1895.110 kb on - strand, within MPMX20_01801 at 1895.144 kb on + strand, within MPMX20_01801 at 1895.157 kb on - strand, within MPMX20_01801 at 1895.210 kb on - strand, within MPMX20_01801 at 1895.261 kb on + strand at 1895.266 kb on + strand at 1895.266 kb on + strand at 1895.266 kb on + strand at 1895.269 kb on - strand at 1895.269 kb on - strand at 1895.269 kb on - strand at 1895.269 kb on - strand at 1895.274 kb on - strand at 1895.299 kb on + strand at 1895.316 kb on + strand at 1895.436 kb on + strand at 1895.502 kb on - strand at 1895.626 kb on - strand, within MPMX20_01802 at 1895.626 kb on - strand, within MPMX20_01802 at 1895.696 kb on + strand, within MPMX20_01802 at 1895.696 kb on + strand, within MPMX20_01802 at 1895.701 kb on + strand, within MPMX20_01802 at 1895.704 kb on - strand, within MPMX20_01802 at 1895.734 kb on - strand, within MPMX20_01802 at 1895.734 kb on - strand, within MPMX20_01802 at 1895.820 kb on + strand, within MPMX20_01802 at 1895.881 kb on + strand, within MPMX20_01802 at 1895.881 kb on + strand, within MPMX20_01802 at 1895.934 kb on + strand, within MPMX20_01802 at 1896.076 kb on + strand, within MPMX20_01802 at 1896.081 kb on + strand, within MPMX20_01802 at 1896.111 kb on - strand, within MPMX20_01802 at 1896.152 kb on - strand, within MPMX20_01802 at 1896.176 kb on + strand, within MPMX20_01802 at 1896.186 kb on + strand, within MPMX20_01802 at 1896.191 kb on + strand, within MPMX20_01802 at 1896.201 kb on + strand, within MPMX20_01802 at 1896.204 kb on - strand, within MPMX20_01802
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 1,893,601 + +0.1 1,893,735 + MPMX20_01800 0.18 -0.2 1,893,743 - MPMX20_01800 0.19 -1.2 1,893,786 + MPMX20_01800 0.24 -1.0 1,893,842 + MPMX20_01800 0.30 +2.0 1,893,854 + MPMX20_01800 0.31 +0.4 1,893,862 - MPMX20_01800 0.32 +0.1 1,893,902 + MPMX20_01800 0.36 +1.9 1,893,966 + MPMX20_01800 0.43 +0.6 1,893,974 - MPMX20_01800 0.44 -0.7 1,893,974 - MPMX20_01800 0.44 +0.1 1,894,013 + MPMX20_01800 0.49 +0.3 1,894,019 + MPMX20_01800 0.49 -0.0 1,894,086 + MPMX20_01800 0.57 +2.6 1,894,089 - MPMX20_01800 0.57 +0.0 1,894,110 + MPMX20_01800 0.59 -1.2 1,894,255 + MPMX20_01800 0.75 +1.4 1,894,263 - MPMX20_01800 0.76 +1.4 1,894,362 - MPMX20_01800 0.87 +0.1 1,894,446 - +0.3 1,894,498 - +0.2 1,894,509 + +1.4 1,894,514 + -2.1 1,894,615 + MPMX20_01801 0.14 +0.5 1,894,623 - MPMX20_01801 0.15 -0.1 1,894,708 - MPMX20_01801 0.26 +1.6 1,894,805 - MPMX20_01801 0.38 +0.7 1,894,810 + MPMX20_01801 0.38 +1.4 1,895,002 + MPMX20_01801 0.62 +1.1 1,895,092 + MPMX20_01801 0.73 +0.2 1,895,092 + MPMX20_01801 0.73 +1.9 1,895,100 - MPMX20_01801 0.73 +0.2 1,895,107 + MPMX20_01801 0.74 +1.3 1,895,110 - MPMX20_01801 0.75 +1.8 1,895,144 + MPMX20_01801 0.79 -0.6 1,895,157 - MPMX20_01801 0.80 +0.8 1,895,210 - MPMX20_01801 0.87 +1.0 1,895,261 + +0.2 1,895,266 + -2.9 1,895,266 + -1.5 1,895,266 + -0.9 1,895,269 - -1.3 1,895,269 - -0.5 1,895,269 - +0.4 1,895,269 - +0.1 1,895,274 - -0.4 1,895,299 + -1.9 1,895,316 + +0.9 1,895,436 + +1.2 1,895,502 - +1.4 1,895,626 - MPMX20_01802 0.14 -1.3 1,895,626 - MPMX20_01802 0.14 -2.7 1,895,696 + MPMX20_01802 0.17 -0.3 1,895,696 + MPMX20_01802 0.17 +0.3 1,895,701 + MPMX20_01802 0.17 +0.5 1,895,704 - MPMX20_01802 0.18 +1.1 1,895,734 - MPMX20_01802 0.19 +0.5 1,895,734 - MPMX20_01802 0.19 +0.4 1,895,820 + MPMX20_01802 0.24 +1.0 1,895,881 + MPMX20_01802 0.27 -1.0 1,895,881 + MPMX20_01802 0.27 +0.2 1,895,934 + MPMX20_01802 0.30 +0.1 1,896,076 + MPMX20_01802 0.37 -3.3 1,896,081 + MPMX20_01802 0.37 -1.0 1,896,111 - MPMX20_01802 0.39 +0.6 1,896,152 - MPMX20_01802 0.41 +0.6 1,896,176 + MPMX20_01802 0.42 -4.0 1,896,186 + MPMX20_01802 0.43 +0.6 1,896,191 + MPMX20_01802 0.43 -0.2 1,896,201 + MPMX20_01802 0.43 +0.3 1,896,204 - MPMX20_01802 0.43 -1.9
Or see this region's nucleotide sequence