Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01577 and MPMX20_01578 overlap by 24 nucleotides MPMX20_01578 and MPMX20_01579 are separated by 124 nucleotides MPMX20_01579 and MPMX20_01580 are separated by 3 nucleotides
MPMX20_01577: MPMX20_01577 - hypothetical protein, at 1,659,640 to 1,660,533
_01577
MPMX20_01578: MPMX20_01578 - hypothetical protein, at 1,660,510 to 1,661,289
_01578
MPMX20_01579: MPMX20_01579 - tRNA 5-carboxymethoxyuridine methyltransferase, at 1,661,414 to 1,662,193
_01579
MPMX20_01580: MPMX20_01580 - Chromosome partition protein MukF, at 1,662,197 to 1,663,519
_01580
Position (kb)
1660
1661
1662 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1659.540 kb on - strand at 1659.581 kb on + strand at 1659.583 kb on + strand at 1659.643 kb on + strand at 1659.643 kb on + strand at 1659.649 kb on - strand at 1659.653 kb on + strand at 1659.653 kb on + strand at 1659.656 kb on - strand at 1659.692 kb on + strand at 1659.692 kb on + strand at 1659.700 kb on - strand at 1659.744 kb on - strand, within MPMX20_01577 at 1659.845 kb on - strand, within MPMX20_01577 at 1659.862 kb on + strand, within MPMX20_01577 at 1659.871 kb on + strand, within MPMX20_01577 at 1659.921 kb on + strand, within MPMX20_01577 at 1659.965 kb on + strand, within MPMX20_01577 at 1660.025 kb on + strand, within MPMX20_01577 at 1660.112 kb on + strand, within MPMX20_01577 at 1660.112 kb on + strand, within MPMX20_01577 at 1660.112 kb on + strand, within MPMX20_01577 at 1660.112 kb on + strand, within MPMX20_01577 at 1660.112 kb on + strand, within MPMX20_01577 at 1660.112 kb on + strand, within MPMX20_01577 at 1660.112 kb on + strand, within MPMX20_01577 at 1660.112 kb on + strand, within MPMX20_01577 at 1660.120 kb on - strand, within MPMX20_01577 at 1660.120 kb on - strand, within MPMX20_01577 at 1660.120 kb on - strand, within MPMX20_01577 at 1660.120 kb on - strand, within MPMX20_01577 at 1660.120 kb on - strand, within MPMX20_01577 at 1660.120 kb on - strand, within MPMX20_01577 at 1660.120 kb on - strand, within MPMX20_01577 at 1660.120 kb on - strand, within MPMX20_01577 at 1660.120 kb on - strand, within MPMX20_01577 at 1660.120 kb on - strand, within MPMX20_01577 at 1660.120 kb on - strand, within MPMX20_01577 at 1660.135 kb on + strand, within MPMX20_01577 at 1660.143 kb on - strand, within MPMX20_01577 at 1660.143 kb on - strand, within MPMX20_01577 at 1660.179 kb on + strand, within MPMX20_01577 at 1660.207 kb on + strand, within MPMX20_01577 at 1660.308 kb on + strand, within MPMX20_01577 at 1660.325 kb on + strand, within MPMX20_01577 at 1660.333 kb on - strand, within MPMX20_01577 at 1660.333 kb on - strand, within MPMX20_01577 at 1660.374 kb on - strand, within MPMX20_01577 at 1660.450 kb on - strand at 1660.451 kb on - strand at 1660.461 kb on + strand at 1660.469 kb on - strand at 1660.469 kb on - strand at 1660.469 kb on - strand at 1660.513 kb on + strand at 1660.521 kb on - strand at 1660.535 kb on - strand at 1660.609 kb on + strand, within MPMX20_01578 at 1660.678 kb on - strand, within MPMX20_01578 at 1660.723 kb on + strand, within MPMX20_01578 at 1660.760 kb on - strand, within MPMX20_01578 at 1660.800 kb on + strand, within MPMX20_01578 at 1660.800 kb on + strand, within MPMX20_01578 at 1660.808 kb on - strand, within MPMX20_01578 at 1660.818 kb on - strand, within MPMX20_01578 at 1660.818 kb on - strand, within MPMX20_01578 at 1660.842 kb on - strand, within MPMX20_01578 at 1660.875 kb on - strand, within MPMX20_01578 at 1660.997 kb on - strand, within MPMX20_01578 at 1661.016 kb on - strand, within MPMX20_01578 at 1661.021 kb on + strand, within MPMX20_01578 at 1661.029 kb on - strand, within MPMX20_01578 at 1661.035 kb on - strand, within MPMX20_01578 at 1661.050 kb on - strand, within MPMX20_01578 at 1661.086 kb on + strand, within MPMX20_01578 at 1661.094 kb on - strand, within MPMX20_01578 at 1661.104 kb on - strand, within MPMX20_01578 at 1661.114 kb on - strand, within MPMX20_01578 at 1661.129 kb on - strand, within MPMX20_01578 at 1661.207 kb on + strand, within MPMX20_01578 at 1661.238 kb on + strand at 1661.322 kb on - strand at 1661.358 kb on - strand at 1661.460 kb on + strand at 1661.462 kb on + strand at 1661.510 kb on + strand, within MPMX20_01579 at 1661.554 kb on - strand, within MPMX20_01579 at 1661.616 kb on + strand, within MPMX20_01579 at 1661.647 kb on + strand, within MPMX20_01579 at 1661.667 kb on + strand, within MPMX20_01579 at 1661.675 kb on - strand, within MPMX20_01579 at 1661.725 kb on - strand, within MPMX20_01579 at 1661.774 kb on + strand, within MPMX20_01579 at 1661.774 kb on + strand, within MPMX20_01579 at 1661.774 kb on + strand, within MPMX20_01579 at 1661.774 kb on + strand, within MPMX20_01579 at 1661.774 kb on + strand, within MPMX20_01579 at 1661.820 kb on + strand, within MPMX20_01579 at 1661.867 kb on + strand, within MPMX20_01579 at 1661.894 kb on + strand, within MPMX20_01579 at 1661.983 kb on + strand, within MPMX20_01579 at 1661.984 kb on + strand, within MPMX20_01579 at 1661.984 kb on + strand, within MPMX20_01579 at 1662.074 kb on + strand, within MPMX20_01579 at 1662.084 kb on + strand, within MPMX20_01579 at 1662.115 kb on + strand, within MPMX20_01579 at 1662.124 kb on + strand at 1662.182 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 1,659,540 - +1.0 1,659,581 + -0.3 1,659,583 + +1.2 1,659,643 + -3.4 1,659,643 + -1.5 1,659,649 - -3.2 1,659,653 + +1.9 1,659,653 + -0.8 1,659,656 - +0.7 1,659,692 + -1.7 1,659,692 + +0.9 1,659,700 - +1.5 1,659,744 - MPMX20_01577 0.12 +0.7 1,659,845 - MPMX20_01577 0.23 -0.9 1,659,862 + MPMX20_01577 0.25 +1.0 1,659,871 + MPMX20_01577 0.26 -1.9 1,659,921 + MPMX20_01577 0.31 -0.0 1,659,965 + MPMX20_01577 0.36 +0.7 1,660,025 + MPMX20_01577 0.43 -0.3 1,660,112 + MPMX20_01577 0.53 -0.0 1,660,112 + MPMX20_01577 0.53 +0.9 1,660,112 + MPMX20_01577 0.53 +0.4 1,660,112 + MPMX20_01577 0.53 -1.9 1,660,112 + MPMX20_01577 0.53 +1.5 1,660,112 + MPMX20_01577 0.53 +0.3 1,660,112 + MPMX20_01577 0.53 +2.0 1,660,112 + MPMX20_01577 0.53 +0.6 1,660,120 - MPMX20_01577 0.54 -3.3 1,660,120 - MPMX20_01577 0.54 -0.2 1,660,120 - MPMX20_01577 0.54 +0.5 1,660,120 - MPMX20_01577 0.54 -0.6 1,660,120 - MPMX20_01577 0.54 -0.3 1,660,120 - MPMX20_01577 0.54 -0.5 1,660,120 - MPMX20_01577 0.54 -0.2 1,660,120 - MPMX20_01577 0.54 +0.7 1,660,120 - MPMX20_01577 0.54 -1.6 1,660,120 - MPMX20_01577 0.54 -0.2 1,660,120 - MPMX20_01577 0.54 -2.2 1,660,135 + MPMX20_01577 0.55 +0.5 1,660,143 - MPMX20_01577 0.56 -0.7 1,660,143 - MPMX20_01577 0.56 +1.7 1,660,179 + MPMX20_01577 0.60 +1.4 1,660,207 + MPMX20_01577 0.63 +0.6 1,660,308 + MPMX20_01577 0.75 -1.6 1,660,325 + MPMX20_01577 0.77 +1.4 1,660,333 - MPMX20_01577 0.78 +0.1 1,660,333 - MPMX20_01577 0.78 +0.7 1,660,374 - MPMX20_01577 0.82 +0.6 1,660,450 - -1.1 1,660,451 - -3.9 1,660,461 + -0.6 1,660,469 - -0.5 1,660,469 - -0.5 1,660,469 - -1.6 1,660,513 + +1.3 1,660,521 - -0.5 1,660,535 - +1.3 1,660,609 + MPMX20_01578 0.13 +0.2 1,660,678 - MPMX20_01578 0.22 -1.4 1,660,723 + MPMX20_01578 0.27 -1.0 1,660,760 - MPMX20_01578 0.32 +1.1 1,660,800 + MPMX20_01578 0.37 +0.2 1,660,800 + MPMX20_01578 0.37 -0.2 1,660,808 - MPMX20_01578 0.38 -0.1 1,660,818 - MPMX20_01578 0.39 -0.6 1,660,818 - MPMX20_01578 0.39 +1.6 1,660,842 - MPMX20_01578 0.43 +0.2 1,660,875 - MPMX20_01578 0.47 -0.1 1,660,997 - MPMX20_01578 0.62 +1.9 1,661,016 - MPMX20_01578 0.65 +0.0 1,661,021 + MPMX20_01578 0.66 -1.2 1,661,029 - MPMX20_01578 0.67 -0.4 1,661,035 - MPMX20_01578 0.67 -0.8 1,661,050 - MPMX20_01578 0.69 -0.7 1,661,086 + MPMX20_01578 0.74 +0.4 1,661,094 - MPMX20_01578 0.75 +0.3 1,661,104 - MPMX20_01578 0.76 -0.5 1,661,114 - MPMX20_01578 0.77 -0.1 1,661,129 - MPMX20_01578 0.79 -0.2 1,661,207 + MPMX20_01578 0.89 -0.5 1,661,238 + +1.2 1,661,322 - -0.1 1,661,358 - -0.7 1,661,460 + +0.8 1,661,462 + -1.9 1,661,510 + MPMX20_01579 0.12 -0.8 1,661,554 - MPMX20_01579 0.18 -1.2 1,661,616 + MPMX20_01579 0.26 -2.6 1,661,647 + MPMX20_01579 0.30 -2.2 1,661,667 + MPMX20_01579 0.32 -0.8 1,661,675 - MPMX20_01579 0.33 +2.5 1,661,725 - MPMX20_01579 0.40 -0.5 1,661,774 + MPMX20_01579 0.46 +1.5 1,661,774 + MPMX20_01579 0.46 +0.8 1,661,774 + MPMX20_01579 0.46 +0.7 1,661,774 + MPMX20_01579 0.46 +0.8 1,661,774 + MPMX20_01579 0.46 -0.6 1,661,820 + MPMX20_01579 0.52 +0.7 1,661,867 + MPMX20_01579 0.58 +0.6 1,661,894 + MPMX20_01579 0.62 -1.5 1,661,983 + MPMX20_01579 0.73 -1.0 1,661,984 + MPMX20_01579 0.73 +0.2 1,661,984 + MPMX20_01579 0.73 +0.1 1,662,074 + MPMX20_01579 0.85 +1.4 1,662,084 + MPMX20_01579 0.86 +0.8 1,662,115 + MPMX20_01579 0.90 +0.1 1,662,124 + +0.4 1,662,182 + -0.5
Or see this region's nucleotide sequence