Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01578

Experiment: L-Phenylalanine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01577 and MPMX20_01578 overlap by 24 nucleotidesMPMX20_01578 and MPMX20_01579 are separated by 124 nucleotidesMPMX20_01579 and MPMX20_01580 are separated by 3 nucleotides MPMX20_01577: MPMX20_01577 - hypothetical protein, at 1,659,640 to 1,660,533 _01577 MPMX20_01578: MPMX20_01578 - hypothetical protein, at 1,660,510 to 1,661,289 _01578 MPMX20_01579: MPMX20_01579 - tRNA 5-carboxymethoxyuridine methyltransferase, at 1,661,414 to 1,662,193 _01579 MPMX20_01580: MPMX20_01580 - Chromosome partition protein MukF, at 1,662,197 to 1,663,519 _01580 Position (kb) 1660 1661 1662Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1659.540 kb on - strandat 1659.581 kb on + strandat 1659.583 kb on + strandat 1659.643 kb on + strandat 1659.643 kb on + strandat 1659.649 kb on - strandat 1659.653 kb on + strandat 1659.653 kb on + strandat 1659.656 kb on - strandat 1659.692 kb on + strandat 1659.692 kb on + strandat 1659.700 kb on - strandat 1659.744 kb on - strand, within MPMX20_01577at 1659.845 kb on - strand, within MPMX20_01577at 1659.862 kb on + strand, within MPMX20_01577at 1659.871 kb on + strand, within MPMX20_01577at 1659.921 kb on + strand, within MPMX20_01577at 1659.965 kb on + strand, within MPMX20_01577at 1660.025 kb on + strand, within MPMX20_01577at 1660.112 kb on + strand, within MPMX20_01577at 1660.112 kb on + strand, within MPMX20_01577at 1660.112 kb on + strand, within MPMX20_01577at 1660.112 kb on + strand, within MPMX20_01577at 1660.112 kb on + strand, within MPMX20_01577at 1660.112 kb on + strand, within MPMX20_01577at 1660.112 kb on + strand, within MPMX20_01577at 1660.112 kb on + strand, within MPMX20_01577at 1660.120 kb on - strand, within MPMX20_01577at 1660.120 kb on - strand, within MPMX20_01577at 1660.120 kb on - strand, within MPMX20_01577at 1660.120 kb on - strand, within MPMX20_01577at 1660.120 kb on - strand, within MPMX20_01577at 1660.120 kb on - strand, within MPMX20_01577at 1660.120 kb on - strand, within MPMX20_01577at 1660.120 kb on - strand, within MPMX20_01577at 1660.120 kb on - strand, within MPMX20_01577at 1660.120 kb on - strand, within MPMX20_01577at 1660.120 kb on - strand, within MPMX20_01577at 1660.135 kb on + strand, within MPMX20_01577at 1660.143 kb on - strand, within MPMX20_01577at 1660.143 kb on - strand, within MPMX20_01577at 1660.179 kb on + strand, within MPMX20_01577at 1660.207 kb on + strand, within MPMX20_01577at 1660.308 kb on + strand, within MPMX20_01577at 1660.325 kb on + strand, within MPMX20_01577at 1660.333 kb on - strand, within MPMX20_01577at 1660.333 kb on - strand, within MPMX20_01577at 1660.374 kb on - strand, within MPMX20_01577at 1660.450 kb on - strandat 1660.451 kb on - strandat 1660.461 kb on + strandat 1660.469 kb on - strandat 1660.469 kb on - strandat 1660.469 kb on - strandat 1660.513 kb on + strandat 1660.521 kb on - strandat 1660.535 kb on - strandat 1660.609 kb on + strand, within MPMX20_01578at 1660.678 kb on - strand, within MPMX20_01578at 1660.723 kb on + strand, within MPMX20_01578at 1660.760 kb on - strand, within MPMX20_01578at 1660.800 kb on + strand, within MPMX20_01578at 1660.800 kb on + strand, within MPMX20_01578at 1660.808 kb on - strand, within MPMX20_01578at 1660.818 kb on - strand, within MPMX20_01578at 1660.818 kb on - strand, within MPMX20_01578at 1660.842 kb on - strand, within MPMX20_01578at 1660.875 kb on - strand, within MPMX20_01578at 1660.997 kb on - strand, within MPMX20_01578at 1661.016 kb on - strand, within MPMX20_01578at 1661.021 kb on + strand, within MPMX20_01578at 1661.029 kb on - strand, within MPMX20_01578at 1661.035 kb on - strand, within MPMX20_01578at 1661.050 kb on - strand, within MPMX20_01578at 1661.086 kb on + strand, within MPMX20_01578at 1661.094 kb on - strand, within MPMX20_01578at 1661.104 kb on - strand, within MPMX20_01578at 1661.114 kb on - strand, within MPMX20_01578at 1661.129 kb on - strand, within MPMX20_01578at 1661.207 kb on + strand, within MPMX20_01578at 1661.238 kb on + strandat 1661.322 kb on - strandat 1661.358 kb on - strandat 1661.460 kb on + strandat 1661.462 kb on + strandat 1661.510 kb on + strand, within MPMX20_01579at 1661.554 kb on - strand, within MPMX20_01579at 1661.616 kb on + strand, within MPMX20_01579at 1661.647 kb on + strand, within MPMX20_01579at 1661.667 kb on + strand, within MPMX20_01579at 1661.675 kb on - strand, within MPMX20_01579at 1661.725 kb on - strand, within MPMX20_01579at 1661.774 kb on + strand, within MPMX20_01579at 1661.774 kb on + strand, within MPMX20_01579at 1661.774 kb on + strand, within MPMX20_01579at 1661.774 kb on + strand, within MPMX20_01579at 1661.774 kb on + strand, within MPMX20_01579at 1661.820 kb on + strand, within MPMX20_01579at 1661.867 kb on + strand, within MPMX20_01579at 1661.894 kb on + strand, within MPMX20_01579at 1661.983 kb on + strand, within MPMX20_01579at 1661.984 kb on + strand, within MPMX20_01579at 1661.984 kb on + strand, within MPMX20_01579at 1662.074 kb on + strand, within MPMX20_01579at 1662.084 kb on + strand, within MPMX20_01579at 1662.115 kb on + strand, within MPMX20_01579at 1662.124 kb on + strandat 1662.182 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (C)
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1,659,540 - +1.0
1,659,581 + -0.3
1,659,583 + +1.2
1,659,643 + -3.4
1,659,643 + -1.5
1,659,649 - -3.2
1,659,653 + +1.9
1,659,653 + -0.8
1,659,656 - +0.7
1,659,692 + -1.7
1,659,692 + +0.9
1,659,700 - +1.5
1,659,744 - MPMX20_01577 0.12 +0.7
1,659,845 - MPMX20_01577 0.23 -0.9
1,659,862 + MPMX20_01577 0.25 +1.0
1,659,871 + MPMX20_01577 0.26 -1.9
1,659,921 + MPMX20_01577 0.31 -0.0
1,659,965 + MPMX20_01577 0.36 +0.7
1,660,025 + MPMX20_01577 0.43 -0.3
1,660,112 + MPMX20_01577 0.53 -0.0
1,660,112 + MPMX20_01577 0.53 +0.9
1,660,112 + MPMX20_01577 0.53 +0.4
1,660,112 + MPMX20_01577 0.53 -1.9
1,660,112 + MPMX20_01577 0.53 +1.5
1,660,112 + MPMX20_01577 0.53 +0.3
1,660,112 + MPMX20_01577 0.53 +2.0
1,660,112 + MPMX20_01577 0.53 +0.6
1,660,120 - MPMX20_01577 0.54 -3.3
1,660,120 - MPMX20_01577 0.54 -0.2
1,660,120 - MPMX20_01577 0.54 +0.5
1,660,120 - MPMX20_01577 0.54 -0.6
1,660,120 - MPMX20_01577 0.54 -0.3
1,660,120 - MPMX20_01577 0.54 -0.5
1,660,120 - MPMX20_01577 0.54 -0.2
1,660,120 - MPMX20_01577 0.54 +0.7
1,660,120 - MPMX20_01577 0.54 -1.6
1,660,120 - MPMX20_01577 0.54 -0.2
1,660,120 - MPMX20_01577 0.54 -2.2
1,660,135 + MPMX20_01577 0.55 +0.5
1,660,143 - MPMX20_01577 0.56 -0.7
1,660,143 - MPMX20_01577 0.56 +1.7
1,660,179 + MPMX20_01577 0.60 +1.4
1,660,207 + MPMX20_01577 0.63 +0.6
1,660,308 + MPMX20_01577 0.75 -1.6
1,660,325 + MPMX20_01577 0.77 +1.4
1,660,333 - MPMX20_01577 0.78 +0.1
1,660,333 - MPMX20_01577 0.78 +0.7
1,660,374 - MPMX20_01577 0.82 +0.6
1,660,450 - -1.1
1,660,451 - -3.9
1,660,461 + -0.6
1,660,469 - -0.5
1,660,469 - -0.5
1,660,469 - -1.6
1,660,513 + +1.3
1,660,521 - -0.5
1,660,535 - +1.3
1,660,609 + MPMX20_01578 0.13 +0.2
1,660,678 - MPMX20_01578 0.22 -1.4
1,660,723 + MPMX20_01578 0.27 -1.0
1,660,760 - MPMX20_01578 0.32 +1.1
1,660,800 + MPMX20_01578 0.37 +0.2
1,660,800 + MPMX20_01578 0.37 -0.2
1,660,808 - MPMX20_01578 0.38 -0.1
1,660,818 - MPMX20_01578 0.39 -0.6
1,660,818 - MPMX20_01578 0.39 +1.6
1,660,842 - MPMX20_01578 0.43 +0.2
1,660,875 - MPMX20_01578 0.47 -0.1
1,660,997 - MPMX20_01578 0.62 +1.9
1,661,016 - MPMX20_01578 0.65 +0.0
1,661,021 + MPMX20_01578 0.66 -1.2
1,661,029 - MPMX20_01578 0.67 -0.4
1,661,035 - MPMX20_01578 0.67 -0.8
1,661,050 - MPMX20_01578 0.69 -0.7
1,661,086 + MPMX20_01578 0.74 +0.4
1,661,094 - MPMX20_01578 0.75 +0.3
1,661,104 - MPMX20_01578 0.76 -0.5
1,661,114 - MPMX20_01578 0.77 -0.1
1,661,129 - MPMX20_01578 0.79 -0.2
1,661,207 + MPMX20_01578 0.89 -0.5
1,661,238 + +1.2
1,661,322 - -0.1
1,661,358 - -0.7
1,661,460 + +0.8
1,661,462 + -1.9
1,661,510 + MPMX20_01579 0.12 -0.8
1,661,554 - MPMX20_01579 0.18 -1.2
1,661,616 + MPMX20_01579 0.26 -2.6
1,661,647 + MPMX20_01579 0.30 -2.2
1,661,667 + MPMX20_01579 0.32 -0.8
1,661,675 - MPMX20_01579 0.33 +2.5
1,661,725 - MPMX20_01579 0.40 -0.5
1,661,774 + MPMX20_01579 0.46 +1.5
1,661,774 + MPMX20_01579 0.46 +0.8
1,661,774 + MPMX20_01579 0.46 +0.7
1,661,774 + MPMX20_01579 0.46 +0.8
1,661,774 + MPMX20_01579 0.46 -0.6
1,661,820 + MPMX20_01579 0.52 +0.7
1,661,867 + MPMX20_01579 0.58 +0.6
1,661,894 + MPMX20_01579 0.62 -1.5
1,661,983 + MPMX20_01579 0.73 -1.0
1,661,984 + MPMX20_01579 0.73 +0.2
1,661,984 + MPMX20_01579 0.73 +0.1
1,662,074 + MPMX20_01579 0.85 +1.4
1,662,084 + MPMX20_01579 0.86 +0.8
1,662,115 + MPMX20_01579 0.90 +0.1
1,662,124 + +0.4
1,662,182 + -0.5

Or see this region's nucleotide sequence