Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01100

Experiment: L-Phenylalanine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01098 and MPMX20_01099 are separated by 212 nucleotidesMPMX20_01099 and MPMX20_01100 are separated by 137 nucleotidesMPMX20_01100 and MPMX20_01101 are separated by 3 nucleotidesMPMX20_01101 and MPMX20_01102 are separated by 174 nucleotides MPMX20_01098: MPMX20_01098 - N5-carboxyaminoimidazole ribonucleotide mutase, at 1,158,774 to 1,159,283 _01098 MPMX20_01099: MPMX20_01099 - hypothetical protein, at 1,159,496 to 1,159,705 _01099 MPMX20_01100: MPMX20_01100 - UDP-2,3-diacylglucosamine hydrolase, at 1,159,843 to 1,160,565 _01100 MPMX20_01101: MPMX20_01101 - Peptidyl-prolyl cis-trans isomerase B, at 1,160,569 to 1,161,063 _01101 MPMX20_01102: MPMX20_01102 - Cysteine--tRNA ligase, at 1,161,238 to 1,162,623 _01102 Position (kb) 1159 1160 1161Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1158.857 kb on - strand, within MPMX20_01098at 1158.972 kb on - strand, within MPMX20_01098at 1158.987 kb on + strand, within MPMX20_01098at 1158.987 kb on + strand, within MPMX20_01098at 1158.995 kb on - strand, within MPMX20_01098at 1159.014 kb on + strand, within MPMX20_01098at 1159.069 kb on - strand, within MPMX20_01098at 1159.091 kb on + strand, within MPMX20_01098at 1159.141 kb on + strand, within MPMX20_01098at 1159.149 kb on - strand, within MPMX20_01098at 1159.149 kb on - strand, within MPMX20_01098at 1159.231 kb on + strand, within MPMX20_01098at 1159.239 kb on - strandat 1159.515 kb on - strandat 1159.612 kb on + strand, within MPMX20_01099at 1159.615 kb on - strand, within MPMX20_01099at 1159.626 kb on + strand, within MPMX20_01099at 1159.747 kb on + strandat 1159.781 kb on - strandat 1159.871 kb on - strandat 1160.686 kb on - strand, within MPMX20_01101at 1160.686 kb on - strand, within MPMX20_01101at 1160.716 kb on - strand, within MPMX20_01101at 1160.716 kb on - strand, within MPMX20_01101at 1161.086 kb on + strandat 1161.153 kb on + strandat 1161.153 kb on + strandat 1161.160 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (C)
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1,158,857 - MPMX20_01098 0.16 +0.9
1,158,972 - MPMX20_01098 0.39 -4.2
1,158,987 + MPMX20_01098 0.42 -1.6
1,158,987 + MPMX20_01098 0.42 +1.0
1,158,995 - MPMX20_01098 0.43 -3.4
1,159,014 + MPMX20_01098 0.47 -3.7
1,159,069 - MPMX20_01098 0.58 -3.2
1,159,091 + MPMX20_01098 0.62 -3.0
1,159,141 + MPMX20_01098 0.72 -2.9
1,159,149 - MPMX20_01098 0.74 -3.1
1,159,149 - MPMX20_01098 0.74 -2.9
1,159,231 + MPMX20_01098 0.90 -2.5
1,159,239 - -2.6
1,159,515 - -1.2
1,159,612 + MPMX20_01099 0.55 +1.8
1,159,615 - MPMX20_01099 0.57 +1.7
1,159,626 + MPMX20_01099 0.62 -0.1
1,159,747 + -0.0
1,159,781 - +2.4
1,159,871 - -3.8
1,160,686 - MPMX20_01101 0.24 -1.9
1,160,686 - MPMX20_01101 0.24 -1.5
1,160,716 - MPMX20_01101 0.30 -3.8
1,160,716 - MPMX20_01101 0.30 -1.3
1,161,086 + +1.2
1,161,153 + -1.8
1,161,153 + -0.7
1,161,160 + +1.6

Or see this region's nucleotide sequence