Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01065

Experiment: L-Phenylalanine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_01064 and MPMX20_01065 are separated by 22 nucleotidesMPMX20_01065 and MPMX20_01066 are separated by 201 nucleotidesMPMX20_01066 and MPMX20_01067 are separated by 113 nucleotides MPMX20_01064: MPMX20_01064 - Multidrug efflux pump subunit AcrB, at 1,118,258 to 1,121,404 _01064 MPMX20_01065: MPMX20_01065 - Multidrug efflux pump subunit AcrA, at 1,121,427 to 1,122,620 _01065 MPMX20_01066: MPMX20_01066 - HTH-type transcriptional regulator AcrR, at 1,122,822 to 1,123,415 _01066 MPMX20_01067: MPMX20_01067 - Mechanosensitive channel MscK, at 1,123,529 to 1,126,876 _01067 Position (kb) 1121 1122 1123Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1120.502 kb on + strand, within MPMX20_01064at 1120.557 kb on + strand, within MPMX20_01064at 1120.557 kb on + strand, within MPMX20_01064at 1120.557 kb on + strand, within MPMX20_01064at 1120.557 kb on + strand, within MPMX20_01064at 1120.565 kb on - strand, within MPMX20_01064at 1120.565 kb on - strand, within MPMX20_01064at 1120.642 kb on + strand, within MPMX20_01064at 1120.690 kb on - strand, within MPMX20_01064at 1120.690 kb on - strand, within MPMX20_01064at 1120.690 kb on - strand, within MPMX20_01064at 1120.699 kb on - strand, within MPMX20_01064at 1120.745 kb on + strand, within MPMX20_01064at 1120.788 kb on + strand, within MPMX20_01064at 1120.811 kb on - strand, within MPMX20_01064at 1120.845 kb on - strand, within MPMX20_01064at 1120.876 kb on + strand, within MPMX20_01064at 1120.884 kb on - strand, within MPMX20_01064at 1120.884 kb on - strand, within MPMX20_01064at 1121.022 kb on + strand, within MPMX20_01064at 1121.029 kb on - strand, within MPMX20_01064at 1121.043 kb on + strand, within MPMX20_01064at 1121.086 kb on + strand, within MPMX20_01064at 1121.093 kb on - strandat 1121.179 kb on - strandat 1121.259 kb on - strandat 1121.342 kb on - strandat 1121.412 kb on - strandat 1121.431 kb on + strandat 1121.444 kb on - strandat 1121.449 kb on - strandat 1121.497 kb on + strandat 1121.497 kb on + strandat 1121.497 kb on + strandat 1121.497 kb on + strandat 1121.497 kb on + strandat 1121.505 kb on - strandat 1121.505 kb on - strandat 1121.505 kb on - strandat 1121.566 kb on - strand, within MPMX20_01065at 1121.590 kb on + strand, within MPMX20_01065at 1121.672 kb on + strand, within MPMX20_01065at 1121.680 kb on - strand, within MPMX20_01065at 1121.763 kb on - strand, within MPMX20_01065at 1121.845 kb on + strand, within MPMX20_01065at 1121.853 kb on - strand, within MPMX20_01065at 1121.853 kb on - strand, within MPMX20_01065at 1121.969 kb on + strand, within MPMX20_01065at 1122.172 kb on + strand, within MPMX20_01065at 1122.180 kb on - strand, within MPMX20_01065at 1122.185 kb on - strand, within MPMX20_01065at 1122.212 kb on + strand, within MPMX20_01065at 1122.212 kb on + strand, within MPMX20_01065at 1122.212 kb on + strand, within MPMX20_01065at 1122.303 kb on + strand, within MPMX20_01065at 1122.303 kb on + strand, within MPMX20_01065at 1122.334 kb on + strand, within MPMX20_01065at 1122.392 kb on + strand, within MPMX20_01065at 1122.415 kb on - strand, within MPMX20_01065at 1122.415 kb on - strand, within MPMX20_01065at 1122.475 kb on + strand, within MPMX20_01065at 1122.476 kb on + strand, within MPMX20_01065at 1122.486 kb on + strand, within MPMX20_01065at 1122.520 kb on + strandat 1122.521 kb on - strandat 1122.523 kb on - strandat 1122.523 kb on - strandat 1122.565 kb on - strandat 1122.788 kb on - strandat 1122.797 kb on - strandat 1122.804 kb on - strandat 1122.812 kb on + strandat 1122.812 kb on + strandat 1122.814 kb on - strandat 1122.820 kb on - strandat 1122.820 kb on - strandat 1122.893 kb on - strand, within MPMX20_01066at 1122.925 kb on + strand, within MPMX20_01066at 1122.930 kb on + strand, within MPMX20_01066at 1122.933 kb on - strand, within MPMX20_01066at 1122.967 kb on + strand, within MPMX20_01066at 1123.049 kb on - strand, within MPMX20_01066at 1123.064 kb on + strand, within MPMX20_01066at 1123.074 kb on + strand, within MPMX20_01066at 1123.082 kb on - strand, within MPMX20_01066at 1123.127 kb on - strand, within MPMX20_01066at 1123.159 kb on - strand, within MPMX20_01066at 1123.188 kb on - strand, within MPMX20_01066at 1123.190 kb on + strand, within MPMX20_01066at 1123.190 kb on + strand, within MPMX20_01066at 1123.190 kb on + strand, within MPMX20_01066at 1123.199 kb on - strand, within MPMX20_01066at 1123.254 kb on + strand, within MPMX20_01066at 1123.257 kb on - strand, within MPMX20_01066at 1123.265 kb on + strand, within MPMX20_01066at 1123.312 kb on + strand, within MPMX20_01066at 1123.312 kb on + strand, within MPMX20_01066at 1123.312 kb on + strand, within MPMX20_01066at 1123.312 kb on + strand, within MPMX20_01066at 1123.320 kb on - strand, within MPMX20_01066at 1123.320 kb on - strand, within MPMX20_01066at 1123.320 kb on - strand, within MPMX20_01066at 1123.320 kb on - strand, within MPMX20_01066at 1123.340 kb on - strand, within MPMX20_01066at 1123.366 kb on + strandat 1123.383 kb on - strandat 1123.454 kb on - strandat 1123.474 kb on + strandat 1123.505 kb on + strandat 1123.537 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (C)
remove
1,120,502 + MPMX20_01064 0.71 -0.7
1,120,557 + MPMX20_01064 0.73 -3.3
1,120,557 + MPMX20_01064 0.73 -2.2
1,120,557 + MPMX20_01064 0.73 -0.8
1,120,557 + MPMX20_01064 0.73 -0.8
1,120,565 - MPMX20_01064 0.73 -0.3
1,120,565 - MPMX20_01064 0.73 +0.4
1,120,642 + MPMX20_01064 0.76 -0.7
1,120,690 - MPMX20_01064 0.77 -1.5
1,120,690 - MPMX20_01064 0.77 -1.1
1,120,690 - MPMX20_01064 0.77 -0.4
1,120,699 - MPMX20_01064 0.78 +0.1
1,120,745 + MPMX20_01064 0.79 -0.1
1,120,788 + MPMX20_01064 0.80 -0.6
1,120,811 - MPMX20_01064 0.81 -0.1
1,120,845 - MPMX20_01064 0.82 -0.9
1,120,876 + MPMX20_01064 0.83 -1.3
1,120,884 - MPMX20_01064 0.83 -0.6
1,120,884 - MPMX20_01064 0.83 -0.7
1,121,022 + MPMX20_01064 0.88 -1.3
1,121,029 - MPMX20_01064 0.88 -2.8
1,121,043 + MPMX20_01064 0.88 +0.6
1,121,086 + MPMX20_01064 0.90 -0.6
1,121,093 - -2.0
1,121,179 - +0.5
1,121,259 - -1.1
1,121,342 - -1.7
1,121,412 - +0.4
1,121,431 + +0.1
1,121,444 - -0.8
1,121,449 - +1.7
1,121,497 + -0.3
1,121,497 + -0.9
1,121,497 + +0.9
1,121,497 + -1.8
1,121,497 + -1.7
1,121,505 - -0.1
1,121,505 - -0.5
1,121,505 - -1.7
1,121,566 - MPMX20_01065 0.12 -0.4
1,121,590 + MPMX20_01065 0.14 -2.2
1,121,672 + MPMX20_01065 0.21 -2.5
1,121,680 - MPMX20_01065 0.21 -1.7
1,121,763 - MPMX20_01065 0.28 -1.8
1,121,845 + MPMX20_01065 0.35 -3.2
1,121,853 - MPMX20_01065 0.36 +1.7
1,121,853 - MPMX20_01065 0.36 -0.8
1,121,969 + MPMX20_01065 0.45 -3.2
1,122,172 + MPMX20_01065 0.62 -3.5
1,122,180 - MPMX20_01065 0.63 -0.9
1,122,185 - MPMX20_01065 0.63 +0.6
1,122,212 + MPMX20_01065 0.66 -2.8
1,122,212 + MPMX20_01065 0.66 -2.8
1,122,212 + MPMX20_01065 0.66 +0.3
1,122,303 + MPMX20_01065 0.73 -0.7
1,122,303 + MPMX20_01065 0.73 -1.7
1,122,334 + MPMX20_01065 0.76 -3.9
1,122,392 + MPMX20_01065 0.81 -1.4
1,122,415 - MPMX20_01065 0.83 -0.4
1,122,415 - MPMX20_01065 0.83 -1.7
1,122,475 + MPMX20_01065 0.88 -0.8
1,122,476 + MPMX20_01065 0.88 +0.3
1,122,486 + MPMX20_01065 0.89 -3.9
1,122,520 + -1.3
1,122,521 - -1.2
1,122,523 - -3.1
1,122,523 - -1.4
1,122,565 - -0.5
1,122,788 - +0.9
1,122,797 - +0.6
1,122,804 - -0.0
1,122,812 + +1.1
1,122,812 + -2.4
1,122,814 - -2.5
1,122,820 - +0.9
1,122,820 - +0.9
1,122,893 - MPMX20_01066 0.12 +2.2
1,122,925 + MPMX20_01066 0.17 +0.3
1,122,930 + MPMX20_01066 0.18 +1.6
1,122,933 - MPMX20_01066 0.19 -1.2
1,122,967 + MPMX20_01066 0.24 +0.6
1,123,049 - MPMX20_01066 0.38 -2.7
1,123,064 + MPMX20_01066 0.41 +0.1
1,123,074 + MPMX20_01066 0.42 -0.7
1,123,082 - MPMX20_01066 0.44 +1.9
1,123,127 - MPMX20_01066 0.51 -0.5
1,123,159 - MPMX20_01066 0.57 -0.5
1,123,188 - MPMX20_01066 0.62 +0.2
1,123,190 + MPMX20_01066 0.62 -0.2
1,123,190 + MPMX20_01066 0.62 +0.8
1,123,190 + MPMX20_01066 0.62 +0.8
1,123,199 - MPMX20_01066 0.63 +0.4
1,123,254 + MPMX20_01066 0.73 +1.1
1,123,257 - MPMX20_01066 0.73 -1.0
1,123,265 + MPMX20_01066 0.75 -1.9
1,123,312 + MPMX20_01066 0.82 +0.6
1,123,312 + MPMX20_01066 0.82 -2.8
1,123,312 + MPMX20_01066 0.82 -2.3
1,123,312 + MPMX20_01066 0.82 +0.2
1,123,320 - MPMX20_01066 0.84 +0.4
1,123,320 - MPMX20_01066 0.84 +0.7
1,123,320 - MPMX20_01066 0.84 +0.5
1,123,320 - MPMX20_01066 0.84 +0.7
1,123,340 - MPMX20_01066 0.87 +1.4
1,123,366 + -0.4
1,123,383 - +1.3
1,123,454 - -1.7
1,123,474 + +0.3
1,123,505 + +0.0
1,123,537 - -2.5

Or see this region's nucleotide sequence