Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01064 and MPMX20_01065 are separated by 22 nucleotides MPMX20_01065 and MPMX20_01066 are separated by 201 nucleotides MPMX20_01066 and MPMX20_01067 are separated by 113 nucleotides
MPMX20_01064: MPMX20_01064 - Multidrug efflux pump subunit AcrB, at 1,118,258 to 1,121,404
_01064
MPMX20_01065: MPMX20_01065 - Multidrug efflux pump subunit AcrA, at 1,121,427 to 1,122,620
_01065
MPMX20_01066: MPMX20_01066 - HTH-type transcriptional regulator AcrR, at 1,122,822 to 1,123,415
_01066
MPMX20_01067: MPMX20_01067 - Mechanosensitive channel MscK, at 1,123,529 to 1,126,876
_01067
Position (kb)
1121
1122
1123 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1120.502 kb on + strand, within MPMX20_01064 at 1120.557 kb on + strand, within MPMX20_01064 at 1120.557 kb on + strand, within MPMX20_01064 at 1120.557 kb on + strand, within MPMX20_01064 at 1120.557 kb on + strand, within MPMX20_01064 at 1120.565 kb on - strand, within MPMX20_01064 at 1120.565 kb on - strand, within MPMX20_01064 at 1120.642 kb on + strand, within MPMX20_01064 at 1120.690 kb on - strand, within MPMX20_01064 at 1120.690 kb on - strand, within MPMX20_01064 at 1120.690 kb on - strand, within MPMX20_01064 at 1120.699 kb on - strand, within MPMX20_01064 at 1120.745 kb on + strand, within MPMX20_01064 at 1120.788 kb on + strand, within MPMX20_01064 at 1120.811 kb on - strand, within MPMX20_01064 at 1120.845 kb on - strand, within MPMX20_01064 at 1120.876 kb on + strand, within MPMX20_01064 at 1120.884 kb on - strand, within MPMX20_01064 at 1120.884 kb on - strand, within MPMX20_01064 at 1121.022 kb on + strand, within MPMX20_01064 at 1121.029 kb on - strand, within MPMX20_01064 at 1121.043 kb on + strand, within MPMX20_01064 at 1121.086 kb on + strand, within MPMX20_01064 at 1121.093 kb on - strand at 1121.179 kb on - strand at 1121.259 kb on - strand at 1121.342 kb on - strand at 1121.412 kb on - strand at 1121.431 kb on + strand at 1121.444 kb on - strand at 1121.449 kb on - strand at 1121.497 kb on + strand at 1121.497 kb on + strand at 1121.497 kb on + strand at 1121.497 kb on + strand at 1121.497 kb on + strand at 1121.505 kb on - strand at 1121.505 kb on - strand at 1121.505 kb on - strand at 1121.566 kb on - strand, within MPMX20_01065 at 1121.590 kb on + strand, within MPMX20_01065 at 1121.672 kb on + strand, within MPMX20_01065 at 1121.680 kb on - strand, within MPMX20_01065 at 1121.763 kb on - strand, within MPMX20_01065 at 1121.845 kb on + strand, within MPMX20_01065 at 1121.853 kb on - strand, within MPMX20_01065 at 1121.853 kb on - strand, within MPMX20_01065 at 1121.969 kb on + strand, within MPMX20_01065 at 1122.172 kb on + strand, within MPMX20_01065 at 1122.180 kb on - strand, within MPMX20_01065 at 1122.185 kb on - strand, within MPMX20_01065 at 1122.212 kb on + strand, within MPMX20_01065 at 1122.212 kb on + strand, within MPMX20_01065 at 1122.212 kb on + strand, within MPMX20_01065 at 1122.303 kb on + strand, within MPMX20_01065 at 1122.303 kb on + strand, within MPMX20_01065 at 1122.334 kb on + strand, within MPMX20_01065 at 1122.392 kb on + strand, within MPMX20_01065 at 1122.415 kb on - strand, within MPMX20_01065 at 1122.415 kb on - strand, within MPMX20_01065 at 1122.475 kb on + strand, within MPMX20_01065 at 1122.476 kb on + strand, within MPMX20_01065 at 1122.486 kb on + strand, within MPMX20_01065 at 1122.520 kb on + strand at 1122.521 kb on - strand at 1122.523 kb on - strand at 1122.523 kb on - strand at 1122.565 kb on - strand at 1122.788 kb on - strand at 1122.797 kb on - strand at 1122.804 kb on - strand at 1122.812 kb on + strand at 1122.812 kb on + strand at 1122.814 kb on - strand at 1122.820 kb on - strand at 1122.820 kb on - strand at 1122.893 kb on - strand, within MPMX20_01066 at 1122.925 kb on + strand, within MPMX20_01066 at 1122.930 kb on + strand, within MPMX20_01066 at 1122.933 kb on - strand, within MPMX20_01066 at 1122.967 kb on + strand, within MPMX20_01066 at 1123.049 kb on - strand, within MPMX20_01066 at 1123.064 kb on + strand, within MPMX20_01066 at 1123.074 kb on + strand, within MPMX20_01066 at 1123.082 kb on - strand, within MPMX20_01066 at 1123.127 kb on - strand, within MPMX20_01066 at 1123.159 kb on - strand, within MPMX20_01066 at 1123.188 kb on - strand, within MPMX20_01066 at 1123.190 kb on + strand, within MPMX20_01066 at 1123.190 kb on + strand, within MPMX20_01066 at 1123.190 kb on + strand, within MPMX20_01066 at 1123.199 kb on - strand, within MPMX20_01066 at 1123.254 kb on + strand, within MPMX20_01066 at 1123.257 kb on - strand, within MPMX20_01066 at 1123.265 kb on + strand, within MPMX20_01066 at 1123.312 kb on + strand, within MPMX20_01066 at 1123.312 kb on + strand, within MPMX20_01066 at 1123.312 kb on + strand, within MPMX20_01066 at 1123.312 kb on + strand, within MPMX20_01066 at 1123.320 kb on - strand, within MPMX20_01066 at 1123.320 kb on - strand, within MPMX20_01066 at 1123.320 kb on - strand, within MPMX20_01066 at 1123.320 kb on - strand, within MPMX20_01066 at 1123.340 kb on - strand, within MPMX20_01066 at 1123.366 kb on + strand at 1123.383 kb on - strand at 1123.454 kb on - strand at 1123.474 kb on + strand at 1123.505 kb on + strand at 1123.537 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 1,120,502 + MPMX20_01064 0.71 -0.7 1,120,557 + MPMX20_01064 0.73 -3.3 1,120,557 + MPMX20_01064 0.73 -2.2 1,120,557 + MPMX20_01064 0.73 -0.8 1,120,557 + MPMX20_01064 0.73 -0.8 1,120,565 - MPMX20_01064 0.73 -0.3 1,120,565 - MPMX20_01064 0.73 +0.4 1,120,642 + MPMX20_01064 0.76 -0.7 1,120,690 - MPMX20_01064 0.77 -1.5 1,120,690 - MPMX20_01064 0.77 -1.1 1,120,690 - MPMX20_01064 0.77 -0.4 1,120,699 - MPMX20_01064 0.78 +0.1 1,120,745 + MPMX20_01064 0.79 -0.1 1,120,788 + MPMX20_01064 0.80 -0.6 1,120,811 - MPMX20_01064 0.81 -0.1 1,120,845 - MPMX20_01064 0.82 -0.9 1,120,876 + MPMX20_01064 0.83 -1.3 1,120,884 - MPMX20_01064 0.83 -0.6 1,120,884 - MPMX20_01064 0.83 -0.7 1,121,022 + MPMX20_01064 0.88 -1.3 1,121,029 - MPMX20_01064 0.88 -2.8 1,121,043 + MPMX20_01064 0.88 +0.6 1,121,086 + MPMX20_01064 0.90 -0.6 1,121,093 - -2.0 1,121,179 - +0.5 1,121,259 - -1.1 1,121,342 - -1.7 1,121,412 - +0.4 1,121,431 + +0.1 1,121,444 - -0.8 1,121,449 - +1.7 1,121,497 + -0.3 1,121,497 + -0.9 1,121,497 + +0.9 1,121,497 + -1.8 1,121,497 + -1.7 1,121,505 - -0.1 1,121,505 - -0.5 1,121,505 - -1.7 1,121,566 - MPMX20_01065 0.12 -0.4 1,121,590 + MPMX20_01065 0.14 -2.2 1,121,672 + MPMX20_01065 0.21 -2.5 1,121,680 - MPMX20_01065 0.21 -1.7 1,121,763 - MPMX20_01065 0.28 -1.8 1,121,845 + MPMX20_01065 0.35 -3.2 1,121,853 - MPMX20_01065 0.36 +1.7 1,121,853 - MPMX20_01065 0.36 -0.8 1,121,969 + MPMX20_01065 0.45 -3.2 1,122,172 + MPMX20_01065 0.62 -3.5 1,122,180 - MPMX20_01065 0.63 -0.9 1,122,185 - MPMX20_01065 0.63 +0.6 1,122,212 + MPMX20_01065 0.66 -2.8 1,122,212 + MPMX20_01065 0.66 -2.8 1,122,212 + MPMX20_01065 0.66 +0.3 1,122,303 + MPMX20_01065 0.73 -0.7 1,122,303 + MPMX20_01065 0.73 -1.7 1,122,334 + MPMX20_01065 0.76 -3.9 1,122,392 + MPMX20_01065 0.81 -1.4 1,122,415 - MPMX20_01065 0.83 -0.4 1,122,415 - MPMX20_01065 0.83 -1.7 1,122,475 + MPMX20_01065 0.88 -0.8 1,122,476 + MPMX20_01065 0.88 +0.3 1,122,486 + MPMX20_01065 0.89 -3.9 1,122,520 + -1.3 1,122,521 - -1.2 1,122,523 - -3.1 1,122,523 - -1.4 1,122,565 - -0.5 1,122,788 - +0.9 1,122,797 - +0.6 1,122,804 - -0.0 1,122,812 + +1.1 1,122,812 + -2.4 1,122,814 - -2.5 1,122,820 - +0.9 1,122,820 - +0.9 1,122,893 - MPMX20_01066 0.12 +2.2 1,122,925 + MPMX20_01066 0.17 +0.3 1,122,930 + MPMX20_01066 0.18 +1.6 1,122,933 - MPMX20_01066 0.19 -1.2 1,122,967 + MPMX20_01066 0.24 +0.6 1,123,049 - MPMX20_01066 0.38 -2.7 1,123,064 + MPMX20_01066 0.41 +0.1 1,123,074 + MPMX20_01066 0.42 -0.7 1,123,082 - MPMX20_01066 0.44 +1.9 1,123,127 - MPMX20_01066 0.51 -0.5 1,123,159 - MPMX20_01066 0.57 -0.5 1,123,188 - MPMX20_01066 0.62 +0.2 1,123,190 + MPMX20_01066 0.62 -0.2 1,123,190 + MPMX20_01066 0.62 +0.8 1,123,190 + MPMX20_01066 0.62 +0.8 1,123,199 - MPMX20_01066 0.63 +0.4 1,123,254 + MPMX20_01066 0.73 +1.1 1,123,257 - MPMX20_01066 0.73 -1.0 1,123,265 + MPMX20_01066 0.75 -1.9 1,123,312 + MPMX20_01066 0.82 +0.6 1,123,312 + MPMX20_01066 0.82 -2.8 1,123,312 + MPMX20_01066 0.82 -2.3 1,123,312 + MPMX20_01066 0.82 +0.2 1,123,320 - MPMX20_01066 0.84 +0.4 1,123,320 - MPMX20_01066 0.84 +0.7 1,123,320 - MPMX20_01066 0.84 +0.5 1,123,320 - MPMX20_01066 0.84 +0.7 1,123,340 - MPMX20_01066 0.87 +1.4 1,123,366 + -0.4 1,123,383 - +1.3 1,123,454 - -1.7 1,123,474 + +0.3 1,123,505 + +0.0 1,123,537 - -2.5
Or see this region's nucleotide sequence