Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00922

Experiment: L-Phenylalanine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00921 and MPMX20_00922 are separated by 54 nucleotidesMPMX20_00922 and MPMX20_00923 are separated by 260 nucleotidesMPMX20_00923 and MPMX20_00924 are separated by 105 nucleotides MPMX20_00921: MPMX20_00921 - DNA polymerase IV, at 969,249 to 970,307 _00921 MPMX20_00922: MPMX20_00922 - Cytosol non-specific dipeptidase, at 970,362 to 971,819 _00922 MPMX20_00923: MPMX20_00923 - Xanthine phosphoribosyltransferase, at 972,080 to 972,538 _00923 MPMX20_00924: MPMX20_00924 - hypothetical protein, at 972,644 to 973,888 _00924 Position (kb) 970 971 972Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 969.362 kb on - strand, within MPMX20_00921at 969.376 kb on - strand, within MPMX20_00921at 969.380 kb on + strand, within MPMX20_00921at 969.380 kb on + strand, within MPMX20_00921at 969.388 kb on - strand, within MPMX20_00921at 969.388 kb on - strand, within MPMX20_00921at 969.388 kb on - strand, within MPMX20_00921at 969.388 kb on - strand, within MPMX20_00921at 969.388 kb on - strand, within MPMX20_00921at 969.407 kb on + strand, within MPMX20_00921at 969.420 kb on - strand, within MPMX20_00921at 969.424 kb on + strand, within MPMX20_00921at 969.440 kb on + strand, within MPMX20_00921at 969.526 kb on + strand, within MPMX20_00921at 969.534 kb on - strand, within MPMX20_00921at 969.554 kb on + strand, within MPMX20_00921at 969.562 kb on - strand, within MPMX20_00921at 969.565 kb on + strand, within MPMX20_00921at 969.582 kb on + strand, within MPMX20_00921at 969.585 kb on - strand, within MPMX20_00921at 969.587 kb on + strand, within MPMX20_00921at 969.609 kb on - strand, within MPMX20_00921at 969.636 kb on + strand, within MPMX20_00921at 969.703 kb on + strand, within MPMX20_00921at 969.731 kb on + strand, within MPMX20_00921at 969.734 kb on - strand, within MPMX20_00921at 969.750 kb on - strand, within MPMX20_00921at 969.750 kb on - strand, within MPMX20_00921at 969.753 kb on + strand, within MPMX20_00921at 969.761 kb on - strand, within MPMX20_00921at 969.889 kb on - strand, within MPMX20_00921at 969.931 kb on + strand, within MPMX20_00921at 969.939 kb on - strand, within MPMX20_00921at 969.953 kb on - strand, within MPMX20_00921at 969.973 kb on - strand, within MPMX20_00921at 969.995 kb on + strand, within MPMX20_00921at 970.010 kb on + strand, within MPMX20_00921at 970.030 kb on - strand, within MPMX20_00921at 970.031 kb on + strand, within MPMX20_00921at 970.049 kb on - strand, within MPMX20_00921at 970.241 kb on - strandat 970.335 kb on + strandat 970.337 kb on + strandat 970.343 kb on - strandat 970.378 kb on + strandat 970.386 kb on - strandat 970.386 kb on - strandat 970.392 kb on + strandat 970.426 kb on + strandat 970.434 kb on - strandat 970.504 kb on + strandat 970.521 kb on + strand, within MPMX20_00922at 970.521 kb on + strand, within MPMX20_00922at 970.521 kb on + strand, within MPMX20_00922at 970.521 kb on + strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.535 kb on + strand, within MPMX20_00922at 970.556 kb on - strand, within MPMX20_00922at 970.566 kb on - strand, within MPMX20_00922at 970.566 kb on - strand, within MPMX20_00922at 970.568 kb on - strand, within MPMX20_00922at 970.711 kb on - strand, within MPMX20_00922at 970.745 kb on - strand, within MPMX20_00922at 970.788 kb on + strand, within MPMX20_00922at 970.881 kb on + strand, within MPMX20_00922at 970.919 kb on - strand, within MPMX20_00922at 970.966 kb on + strand, within MPMX20_00922at 971.028 kb on + strand, within MPMX20_00922at 971.036 kb on - strand, within MPMX20_00922at 971.070 kb on + strand, within MPMX20_00922at 971.145 kb on + strand, within MPMX20_00922at 971.145 kb on + strand, within MPMX20_00922at 971.145 kb on + strand, within MPMX20_00922at 971.145 kb on + strand, within MPMX20_00922at 971.153 kb on - strand, within MPMX20_00922at 971.153 kb on - strand, within MPMX20_00922at 971.153 kb on - strand, within MPMX20_00922at 971.153 kb on - strand, within MPMX20_00922at 971.153 kb on - strand, within MPMX20_00922at 971.167 kb on + strand, within MPMX20_00922at 971.175 kb on - strand, within MPMX20_00922at 971.212 kb on - strand, within MPMX20_00922at 971.222 kb on - strand, within MPMX20_00922at 971.293 kb on + strand, within MPMX20_00922at 971.370 kb on + strand, within MPMX20_00922at 971.378 kb on - strand, within MPMX20_00922at 971.423 kb on - strand, within MPMX20_00922at 971.433 kb on - strand, within MPMX20_00922at 971.453 kb on - strand, within MPMX20_00922at 971.457 kb on + strand, within MPMX20_00922at 971.486 kb on + strand, within MPMX20_00922at 971.487 kb on - strand, within MPMX20_00922at 971.529 kb on - strand, within MPMX20_00922at 971.545 kb on - strand, within MPMX20_00922at 971.558 kb on - strand, within MPMX20_00922at 971.558 kb on - strand, within MPMX20_00922at 971.586 kb on + strand, within MPMX20_00922at 971.586 kb on + strand, within MPMX20_00922at 971.594 kb on - strand, within MPMX20_00922at 971.612 kb on + strand, within MPMX20_00922at 971.714 kb on - strandat 971.810 kb on + strandat 971.810 kb on + strandat 971.817 kb on - strandat 971.874 kb on - strandat 971.875 kb on + strandat 971.875 kb on + strandat 971.875 kb on + strandat 971.875 kb on + strandat 971.876 kb on - strandat 971.883 kb on - strandat 971.883 kb on - strandat 971.883 kb on - strandat 971.883 kb on - strandat 971.883 kb on - strandat 971.887 kb on + strandat 971.887 kb on + strandat 971.898 kb on - strandat 971.915 kb on - strandat 971.970 kb on - strandat 972.064 kb on + strandat 972.064 kb on + strandat 972.072 kb on - strandat 972.072 kb on - strandat 972.074 kb on + strandat 972.074 kb on + strandat 972.080 kb on - strandat 972.109 kb on - strandat 972.110 kb on - strandat 972.143 kb on + strand, within MPMX20_00923at 972.153 kb on + strand, within MPMX20_00923at 972.153 kb on + strand, within MPMX20_00923at 972.207 kb on - strand, within MPMX20_00923at 972.281 kb on - strand, within MPMX20_00923at 972.314 kb on - strand, within MPMX20_00923at 972.319 kb on - strand, within MPMX20_00923at 972.326 kb on + strand, within MPMX20_00923at 972.328 kb on - strand, within MPMX20_00923at 972.334 kb on - strand, within MPMX20_00923at 972.346 kb on + strand, within MPMX20_00923at 972.353 kb on + strand, within MPMX20_00923at 972.403 kb on + strand, within MPMX20_00923at 972.485 kb on - strand, within MPMX20_00923at 972.488 kb on - strand, within MPMX20_00923at 972.490 kb on + strand, within MPMX20_00923at 972.496 kb on + strandat 972.498 kb on - strandat 972.498 kb on - strandat 972.498 kb on - strandat 972.564 kb on + strandat 972.574 kb on - strandat 972.576 kb on - strandat 972.615 kb on + strandat 972.629 kb on + strandat 972.629 kb on + strandat 972.637 kb on - strandat 972.637 kb on - strandat 972.639 kb on + strandat 972.661 kb on + strandat 972.720 kb on + strandat 972.729 kb on - strandat 972.741 kb on - strandat 972.755 kb on + strandat 972.755 kb on + strandat 972.763 kb on - strandat 972.763 kb on - strandat 972.763 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (C)
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969,362 - MPMX20_00921 0.11 +0.8
969,376 - MPMX20_00921 0.12 +0.6
969,380 + MPMX20_00921 0.12 -1.2
969,380 + MPMX20_00921 0.12 -0.1
969,388 - MPMX20_00921 0.13 -1.3
969,388 - MPMX20_00921 0.13 -0.7
969,388 - MPMX20_00921 0.13 -0.6
969,388 - MPMX20_00921 0.13 +0.5
969,388 - MPMX20_00921 0.13 +1.4
969,407 + MPMX20_00921 0.15 -0.9
969,420 - MPMX20_00921 0.16 -2.5
969,424 + MPMX20_00921 0.17 +2.1
969,440 + MPMX20_00921 0.18 +1.3
969,526 + MPMX20_00921 0.26 -1.4
969,534 - MPMX20_00921 0.27 +0.1
969,554 + MPMX20_00921 0.29 -0.1
969,562 - MPMX20_00921 0.30 -0.5
969,565 + MPMX20_00921 0.30 -1.0
969,582 + MPMX20_00921 0.31 -1.1
969,585 - MPMX20_00921 0.32 -0.4
969,587 + MPMX20_00921 0.32 -0.5
969,609 - MPMX20_00921 0.34 -1.1
969,636 + MPMX20_00921 0.37 -0.9
969,703 + MPMX20_00921 0.43 -4.4
969,731 + MPMX20_00921 0.46 -1.1
969,734 - MPMX20_00921 0.46 +1.1
969,750 - MPMX20_00921 0.47 +2.1
969,750 - MPMX20_00921 0.47 +0.6
969,753 + MPMX20_00921 0.48 +0.3
969,761 - MPMX20_00921 0.48 -2.2
969,889 - MPMX20_00921 0.60 +0.5
969,931 + MPMX20_00921 0.64 +1.7
969,939 - MPMX20_00921 0.65 -0.4
969,953 - MPMX20_00921 0.66 -0.4
969,973 - MPMX20_00921 0.68 -1.3
969,995 + MPMX20_00921 0.70 -0.7
970,010 + MPMX20_00921 0.72 -0.5
970,030 - MPMX20_00921 0.74 -2.2
970,031 + MPMX20_00921 0.74 -1.7
970,049 - MPMX20_00921 0.76 -1.6
970,241 - -0.7
970,335 + -3.5
970,337 + -2.3
970,343 - +1.3
970,378 + +0.5
970,386 - +1.2
970,386 - +0.6
970,392 + -3.4
970,426 + -1.7
970,434 - +0.3
970,504 + +0.3
970,521 + MPMX20_00922 0.11 -0.0
970,521 + MPMX20_00922 0.11 -1.8
970,521 + MPMX20_00922 0.11 +0.6
970,521 + MPMX20_00922 0.11 -0.7
970,529 - MPMX20_00922 0.11 -1.5
970,529 - MPMX20_00922 0.11 +0.1
970,529 - MPMX20_00922 0.11 -0.6
970,529 - MPMX20_00922 0.11 +2.0
970,529 - MPMX20_00922 0.11 +0.7
970,529 - MPMX20_00922 0.11 -1.6
970,529 - MPMX20_00922 0.11 +0.3
970,529 - MPMX20_00922 0.11 -0.1
970,535 + MPMX20_00922 0.12 -0.7
970,556 - MPMX20_00922 0.13 -2.3
970,566 - MPMX20_00922 0.14 -4.0
970,566 - MPMX20_00922 0.14 -2.7
970,568 - MPMX20_00922 0.14 +0.6
970,711 - MPMX20_00922 0.24 +1.7
970,745 - MPMX20_00922 0.26 -1.3
970,788 + MPMX20_00922 0.29 -2.1
970,881 + MPMX20_00922 0.36 -1.5
970,919 - MPMX20_00922 0.38 -0.3
970,966 + MPMX20_00922 0.41 -1.9
971,028 + MPMX20_00922 0.46 -1.3
971,036 - MPMX20_00922 0.46 -0.4
971,070 + MPMX20_00922 0.49 -1.1
971,145 + MPMX20_00922 0.54 -1.3
971,145 + MPMX20_00922 0.54 +1.2
971,145 + MPMX20_00922 0.54 -2.3
971,145 + MPMX20_00922 0.54 -0.9
971,153 - MPMX20_00922 0.54 -1.6
971,153 - MPMX20_00922 0.54 -0.6
971,153 - MPMX20_00922 0.54 -0.9
971,153 - MPMX20_00922 0.54 -0.3
971,153 - MPMX20_00922 0.54 -3.3
971,167 + MPMX20_00922 0.55 -1.1
971,175 - MPMX20_00922 0.56 -0.9
971,212 - MPMX20_00922 0.58 -0.5
971,222 - MPMX20_00922 0.59 -0.2
971,293 + MPMX20_00922 0.64 -2.6
971,370 + MPMX20_00922 0.69 -1.0
971,378 - MPMX20_00922 0.70 +0.4
971,423 - MPMX20_00922 0.73 +0.0
971,433 - MPMX20_00922 0.73 -2.0
971,453 - MPMX20_00922 0.75 +0.3
971,457 + MPMX20_00922 0.75 -0.1
971,486 + MPMX20_00922 0.77 -0.7
971,487 - MPMX20_00922 0.77 +0.6
971,529 - MPMX20_00922 0.80 -0.3
971,545 - MPMX20_00922 0.81 +0.6
971,558 - MPMX20_00922 0.82 +0.1
971,558 - MPMX20_00922 0.82 +1.6
971,586 + MPMX20_00922 0.84 -1.9
971,586 + MPMX20_00922 0.84 -0.1
971,594 - MPMX20_00922 0.84 -0.5
971,612 + MPMX20_00922 0.86 -0.1
971,714 - +1.7
971,810 + +0.4
971,810 + +0.1
971,817 - -0.5
971,874 - -2.5
971,875 + -1.0
971,875 + +1.0
971,875 + +0.6
971,875 + +0.6
971,876 - -0.1
971,883 - +1.1
971,883 - -0.7
971,883 - -1.8
971,883 - -0.3
971,883 - +0.7
971,887 + +1.1
971,887 + +0.5
971,898 - -2.3
971,915 - +1.1
971,970 - +0.5
972,064 + -0.6
972,064 + -0.4
972,072 - -0.1
972,072 - -0.9
972,074 + -0.8
972,074 + -0.1
972,080 - -3.1
972,109 - -2.5
972,110 - +1.7
972,143 + MPMX20_00923 0.14 -0.4
972,153 + MPMX20_00923 0.16 -2.3
972,153 + MPMX20_00923 0.16 +0.4
972,207 - MPMX20_00923 0.28 -3.4
972,281 - MPMX20_00923 0.44 -0.9
972,314 - MPMX20_00923 0.51 -1.4
972,319 - MPMX20_00923 0.52 +0.9
972,326 + MPMX20_00923 0.54 +0.5
972,328 - MPMX20_00923 0.54 +0.3
972,334 - MPMX20_00923 0.55 -0.0
972,346 + MPMX20_00923 0.58 +0.1
972,353 + MPMX20_00923 0.59 +1.3
972,403 + MPMX20_00923 0.70 +2.1
972,485 - MPMX20_00923 0.88 +1.2
972,488 - MPMX20_00923 0.89 -0.0
972,490 + MPMX20_00923 0.89 -0.1
972,496 + -0.5
972,498 - -0.8
972,498 - +1.1
972,498 - +0.3
972,564 + +0.7
972,574 - +0.3
972,576 - -2.6
972,615 + +0.6
972,629 + +0.3
972,629 + +0.1
972,637 - -3.3
972,637 - +1.5
972,639 + -0.0
972,661 + -1.4
972,720 + -1.3
972,729 - -1.8
972,741 - -2.8
972,755 + +0.3
972,755 + +0.4
972,763 - -1.3
972,763 - +0.9
972,763 - +0.5

Or see this region's nucleotide sequence