Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02373

Experiment: L-Isoleucine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02371 and MPMX20_02372 are separated by 43 nucleotidesMPMX20_02372 and MPMX20_02373 are separated by 199 nucleotidesMPMX20_02373 and MPMX20_02374 are separated by 30 nucleotides MPMX20_02371: MPMX20_02371 - Alcohol dehydrogenase, propanol-preferring, at 2,499,392 to 2,500,402 _02371 MPMX20_02372: MPMX20_02372 - HTH-type transcriptional repressor NsrR, at 2,500,446 to 2,500,952 _02372 MPMX20_02373: MPMX20_02373 - NADH dehydrogenase-like protein, at 2,501,152 to 2,502,354 _02373 MPMX20_02374: MPMX20_02374 - Putative transporter AraJ, at 2,502,385 to 2,503,563 _02374 Position (kb) 2501 2502 2503Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2500.216 kb on - strand, within MPMX20_02371at 2500.216 kb on - strand, within MPMX20_02371at 2500.250 kb on + strand, within MPMX20_02371at 2500.251 kb on + strand, within MPMX20_02371at 2500.349 kb on - strandat 2500.369 kb on - strandat 2500.382 kb on - strandat 2500.382 kb on - strandat 2500.579 kb on - strand, within MPMX20_02372at 2500.581 kb on + strand, within MPMX20_02372at 2500.589 kb on - strand, within MPMX20_02372at 2500.612 kb on + strand, within MPMX20_02372at 2500.746 kb on - strand, within MPMX20_02372at 2500.785 kb on - strand, within MPMX20_02372at 2500.897 kb on + strand, within MPMX20_02372at 2500.908 kb on - strandat 2501.120 kb on + strandat 2501.120 kb on + strandat 2501.451 kb on + strand, within MPMX20_02373at 2501.462 kb on + strand, within MPMX20_02373at 2501.470 kb on - strand, within MPMX20_02373at 2501.470 kb on - strand, within MPMX20_02373at 2501.549 kb on - strand, within MPMX20_02373at 2501.566 kb on - strand, within MPMX20_02373at 2501.566 kb on - strand, within MPMX20_02373at 2501.600 kb on - strand, within MPMX20_02373at 2501.605 kb on + strand, within MPMX20_02373at 2501.615 kb on - strand, within MPMX20_02373at 2501.615 kb on - strand, within MPMX20_02373at 2501.754 kb on + strand, within MPMX20_02373at 2501.761 kb on + strand, within MPMX20_02373at 2501.766 kb on + strand, within MPMX20_02373at 2501.774 kb on - strand, within MPMX20_02373at 2501.774 kb on - strand, within MPMX20_02373at 2501.774 kb on - strand, within MPMX20_02373at 2501.774 kb on - strand, within MPMX20_02373at 2501.812 kb on + strand, within MPMX20_02373at 2501.812 kb on + strand, within MPMX20_02373at 2501.820 kb on - strand, within MPMX20_02373at 2501.820 kb on - strand, within MPMX20_02373at 2501.820 kb on - strand, within MPMX20_02373at 2501.820 kb on - strand, within MPMX20_02373at 2501.820 kb on - strand, within MPMX20_02373at 2501.857 kb on - strand, within MPMX20_02373at 2501.857 kb on - strand, within MPMX20_02373at 2501.857 kb on - strand, within MPMX20_02373at 2501.895 kb on - strand, within MPMX20_02373at 2501.906 kb on + strand, within MPMX20_02373at 2501.963 kb on + strand, within MPMX20_02373at 2501.988 kb on + strand, within MPMX20_02373at 2502.030 kb on - strand, within MPMX20_02373at 2502.041 kb on - strand, within MPMX20_02373at 2502.064 kb on + strand, within MPMX20_02373at 2502.071 kb on + strand, within MPMX20_02373at 2502.141 kb on + strand, within MPMX20_02373at 2502.141 kb on + strand, within MPMX20_02373at 2502.167 kb on + strand, within MPMX20_02373at 2502.167 kb on - strand, within MPMX20_02373at 2502.167 kb on - strand, within MPMX20_02373at 2502.174 kb on - strand, within MPMX20_02373at 2502.176 kb on + strand, within MPMX20_02373at 2502.176 kb on + strand, within MPMX20_02373at 2502.176 kb on + strand, within MPMX20_02373at 2502.176 kb on + strand, within MPMX20_02373at 2502.176 kb on + strand, within MPMX20_02373at 2502.176 kb on + strand, within MPMX20_02373at 2502.180 kb on + strand, within MPMX20_02373at 2502.184 kb on - strand, within MPMX20_02373at 2502.184 kb on - strand, within MPMX20_02373at 2502.184 kb on - strand, within MPMX20_02373at 2502.184 kb on - strand, within MPMX20_02373at 2502.184 kb on - strand, within MPMX20_02373at 2502.215 kb on + strand, within MPMX20_02373at 2502.223 kb on - strand, within MPMX20_02373at 2502.227 kb on - strand, within MPMX20_02373at 2502.291 kb on + strandat 2502.303 kb on + strandat 2502.311 kb on - strandat 2502.433 kb on - strandat 2502.433 kb on - strandat 2502.445 kb on - strandat 2502.475 kb on - strandat 2502.506 kb on - strand, within MPMX20_02374at 2502.713 kb on - strand, within MPMX20_02374at 2502.737 kb on + strand, within MPMX20_02374at 2502.745 kb on - strand, within MPMX20_02374at 2502.782 kb on - strand, within MPMX20_02374at 2502.823 kb on + strand, within MPMX20_02374at 2502.902 kb on + strand, within MPMX20_02374at 2502.902 kb on + strand, within MPMX20_02374at 2502.902 kb on + strand, within MPMX20_02374at 2502.912 kb on - strand, within MPMX20_02374at 2503.016 kb on + strand, within MPMX20_02374at 2503.022 kb on - strand, within MPMX20_02374at 2503.031 kb on + strand, within MPMX20_02374at 2503.039 kb on - strand, within MPMX20_02374at 2503.039 kb on - strand, within MPMX20_02374at 2503.039 kb on - strand, within MPMX20_02374at 2503.039 kb on - strand, within MPMX20_02374at 2503.041 kb on + strand, within MPMX20_02374at 2503.044 kb on - strand, within MPMX20_02374at 2503.044 kb on - strand, within MPMX20_02374at 2503.061 kb on + strand, within MPMX20_02374at 2503.061 kb on + strand, within MPMX20_02374at 2503.069 kb on - strand, within MPMX20_02374at 2503.104 kb on + strand, within MPMX20_02374at 2503.121 kb on + strand, within MPMX20_02374at 2503.124 kb on - strand, within MPMX20_02374at 2503.126 kb on - strand, within MPMX20_02374at 2503.128 kb on + strand, within MPMX20_02374at 2503.128 kb on + strand, within MPMX20_02374at 2503.138 kb on + strand, within MPMX20_02374at 2503.192 kb on - strand, within MPMX20_02374at 2503.273 kb on + strand, within MPMX20_02374at 2503.328 kb on + strand, within MPMX20_02374

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine (C)
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2,500,216 - MPMX20_02371 0.82 +2.1
2,500,216 - MPMX20_02371 0.82 -0.5
2,500,250 + MPMX20_02371 0.85 +0.1
2,500,251 + MPMX20_02371 0.85 +1.7
2,500,349 - -1.4
2,500,369 - -1.7
2,500,382 - -3.0
2,500,382 - -2.3
2,500,579 - MPMX20_02372 0.26 +1.4
2,500,581 + MPMX20_02372 0.27 -2.7
2,500,589 - MPMX20_02372 0.28 -0.9
2,500,612 + MPMX20_02372 0.33 +0.4
2,500,746 - MPMX20_02372 0.59 -0.6
2,500,785 - MPMX20_02372 0.67 +1.8
2,500,897 + MPMX20_02372 0.89 -0.2
2,500,908 - +0.8
2,501,120 + -0.4
2,501,120 + -0.6
2,501,451 + MPMX20_02373 0.25 -1.4
2,501,462 + MPMX20_02373 0.26 -0.6
2,501,470 - MPMX20_02373 0.26 +1.6
2,501,470 - MPMX20_02373 0.26 -1.4
2,501,549 - MPMX20_02373 0.33 +2.0
2,501,566 - MPMX20_02373 0.34 -1.2
2,501,566 - MPMX20_02373 0.34 -1.7
2,501,600 - MPMX20_02373 0.37 -2.2
2,501,605 + MPMX20_02373 0.38 +1.2
2,501,615 - MPMX20_02373 0.38 +1.8
2,501,615 - MPMX20_02373 0.38 -2.4
2,501,754 + MPMX20_02373 0.50 +1.0
2,501,761 + MPMX20_02373 0.51 -3.5
2,501,766 + MPMX20_02373 0.51 +0.6
2,501,774 - MPMX20_02373 0.52 -2.0
2,501,774 - MPMX20_02373 0.52 +0.4
2,501,774 - MPMX20_02373 0.52 +1.4
2,501,774 - MPMX20_02373 0.52 -2.6
2,501,812 + MPMX20_02373 0.55 +1.6
2,501,812 + MPMX20_02373 0.55 +0.5
2,501,820 - MPMX20_02373 0.56 +1.7
2,501,820 - MPMX20_02373 0.56 -0.3
2,501,820 - MPMX20_02373 0.56 -3.7
2,501,820 - MPMX20_02373 0.56 +1.0
2,501,820 - MPMX20_02373 0.56 -3.2
2,501,857 - MPMX20_02373 0.59 -0.2
2,501,857 - MPMX20_02373 0.59 +1.3
2,501,857 - MPMX20_02373 0.59 -1.9
2,501,895 - MPMX20_02373 0.62 -1.9
2,501,906 + MPMX20_02373 0.63 +1.0
2,501,963 + MPMX20_02373 0.67 +0.0
2,501,988 + MPMX20_02373 0.69 +0.6
2,502,030 - MPMX20_02373 0.73 -2.7
2,502,041 - MPMX20_02373 0.74 -0.9
2,502,064 + MPMX20_02373 0.76 -1.2
2,502,071 + MPMX20_02373 0.76 +1.9
2,502,141 + MPMX20_02373 0.82 +0.7
2,502,141 + MPMX20_02373 0.82 +0.2
2,502,167 + MPMX20_02373 0.84 +0.7
2,502,167 - MPMX20_02373 0.84 +1.3
2,502,167 - MPMX20_02373 0.84 +1.8
2,502,174 - MPMX20_02373 0.85 +2.4
2,502,176 + MPMX20_02373 0.85 -2.2
2,502,176 + MPMX20_02373 0.85 +1.7
2,502,176 + MPMX20_02373 0.85 -0.3
2,502,176 + MPMX20_02373 0.85 +0.1
2,502,176 + MPMX20_02373 0.85 +1.5
2,502,176 + MPMX20_02373 0.85 +0.3
2,502,180 + MPMX20_02373 0.85 +1.4
2,502,184 - MPMX20_02373 0.86 +0.0
2,502,184 - MPMX20_02373 0.86 -0.6
2,502,184 - MPMX20_02373 0.86 -0.2
2,502,184 - MPMX20_02373 0.86 -1.2
2,502,184 - MPMX20_02373 0.86 -1.7
2,502,215 + MPMX20_02373 0.88 -2.5
2,502,223 - MPMX20_02373 0.89 -0.9
2,502,227 - MPMX20_02373 0.89 +2.0
2,502,291 + -1.7
2,502,303 + -2.2
2,502,311 - +0.8
2,502,433 - +0.3
2,502,433 - -0.2
2,502,445 - +0.7
2,502,475 - +0.3
2,502,506 - MPMX20_02374 0.10 +1.7
2,502,713 - MPMX20_02374 0.28 -3.6
2,502,737 + MPMX20_02374 0.30 +1.8
2,502,745 - MPMX20_02374 0.31 +1.7
2,502,782 - MPMX20_02374 0.34 +1.0
2,502,823 + MPMX20_02374 0.37 -0.0
2,502,902 + MPMX20_02374 0.44 +0.8
2,502,902 + MPMX20_02374 0.44 +2.6
2,502,902 + MPMX20_02374 0.44 +1.6
2,502,912 - MPMX20_02374 0.45 +1.5
2,503,016 + MPMX20_02374 0.54 -0.9
2,503,022 - MPMX20_02374 0.54 -2.2
2,503,031 + MPMX20_02374 0.55 -1.2
2,503,039 - MPMX20_02374 0.55 -3.5
2,503,039 - MPMX20_02374 0.55 -2.5
2,503,039 - MPMX20_02374 0.55 +0.4
2,503,039 - MPMX20_02374 0.55 -0.9
2,503,041 + MPMX20_02374 0.56 +1.3
2,503,044 - MPMX20_02374 0.56 +1.0
2,503,044 - MPMX20_02374 0.56 -1.9
2,503,061 + MPMX20_02374 0.57 +1.2
2,503,061 + MPMX20_02374 0.57 +0.2
2,503,069 - MPMX20_02374 0.58 -3.4
2,503,104 + MPMX20_02374 0.61 -2.8
2,503,121 + MPMX20_02374 0.62 -0.6
2,503,124 - MPMX20_02374 0.63 -1.5
2,503,126 - MPMX20_02374 0.63 +0.4
2,503,128 + MPMX20_02374 0.63 -0.3
2,503,128 + MPMX20_02374 0.63 -0.3
2,503,138 + MPMX20_02374 0.64 +1.2
2,503,192 - MPMX20_02374 0.68 -0.2
2,503,273 + MPMX20_02374 0.75 +0.9
2,503,328 + MPMX20_02374 0.80 +1.3

Or see this region's nucleotide sequence