Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01927

Experiment: L-Isoleucine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01926 and MPMX20_01927 overlap by 4 nucleotidesMPMX20_01927 and MPMX20_01928 are separated by 85 nucleotidesMPMX20_01928 and MPMX20_01929 are separated by 51 nucleotides MPMX20_01926: MPMX20_01926 - hypothetical protein, at 2,021,518 to 2,024,574 _01926 MPMX20_01927: MPMX20_01927 - 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, at 2,024,571 to 2,024,981 _01927 MPMX20_01928: MPMX20_01928 - hypothetical protein, at 2,025,067 to 2,025,261 _01928 MPMX20_01929: MPMX20_01929 - Inhibitor of hydrogen peroxide resistance, at 2,025,313 to 2,025,942 _01929 Position (kb) 2024 2025Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2023.574 kb on + strand, within MPMX20_01926at 2023.574 kb on + strand, within MPMX20_01926at 2023.582 kb on - strand, within MPMX20_01926at 2023.619 kb on - strand, within MPMX20_01926at 2023.663 kb on + strand, within MPMX20_01926at 2023.670 kb on + strand, within MPMX20_01926at 2023.670 kb on + strand, within MPMX20_01926at 2023.671 kb on - strand, within MPMX20_01926at 2023.703 kb on + strand, within MPMX20_01926at 2023.711 kb on - strand, within MPMX20_01926at 2023.711 kb on - strand, within MPMX20_01926at 2023.711 kb on - strand, within MPMX20_01926at 2023.806 kb on + strand, within MPMX20_01926at 2023.814 kb on - strand, within MPMX20_01926at 2023.853 kb on - strand, within MPMX20_01926at 2023.859 kb on + strand, within MPMX20_01926at 2023.867 kb on - strand, within MPMX20_01926at 2023.867 kb on - strand, within MPMX20_01926at 2023.867 kb on - strand, within MPMX20_01926at 2023.921 kb on + strand, within MPMX20_01926at 2023.930 kb on - strand, within MPMX20_01926at 2024.013 kb on + strand, within MPMX20_01926at 2024.021 kb on - strand, within MPMX20_01926at 2024.021 kb on - strand, within MPMX20_01926at 2024.021 kb on - strand, within MPMX20_01926at 2024.021 kb on - strand, within MPMX20_01926at 2024.032 kb on - strand, within MPMX20_01926at 2024.230 kb on + strand, within MPMX20_01926at 2024.243 kb on - strand, within MPMX20_01926at 2024.271 kb on + strandat 2024.273 kb on + strandat 2024.293 kb on - strandat 2024.349 kb on - strandat 2024.376 kb on + strandat 2024.376 kb on + strandat 2024.406 kb on - strandat 2024.488 kb on + strandat 2024.496 kb on - strandat 2024.500 kb on - strandat 2024.534 kb on - strandat 2024.545 kb on + strandat 2024.553 kb on - strandat 2024.553 kb on - strandat 2024.629 kb on - strand, within MPMX20_01927at 2024.664 kb on + strand, within MPMX20_01927at 2024.709 kb on + strand, within MPMX20_01927at 2024.717 kb on - strand, within MPMX20_01927at 2024.768 kb on - strand, within MPMX20_01927at 2024.768 kb on - strand, within MPMX20_01927at 2024.791 kb on - strand, within MPMX20_01927at 2024.823 kb on - strand, within MPMX20_01927at 2024.823 kb on - strand, within MPMX20_01927at 2024.847 kb on + strand, within MPMX20_01927at 2024.854 kb on + strand, within MPMX20_01927at 2024.854 kb on + strand, within MPMX20_01927at 2024.862 kb on - strand, within MPMX20_01927at 2024.942 kb on + strandat 2025.045 kb on - strandat 2025.063 kb on + strandat 2025.063 kb on + strandat 2025.071 kb on - strandat 2025.082 kb on + strandat 2025.083 kb on + strandat 2025.083 kb on + strandat 2025.083 kb on + strandat 2025.083 kb on + strandat 2025.091 kb on - strand, within MPMX20_01928at 2025.091 kb on - strand, within MPMX20_01928at 2025.136 kb on - strand, within MPMX20_01928at 2025.140 kb on - strand, within MPMX20_01928at 2025.163 kb on - strand, within MPMX20_01928at 2025.173 kb on - strand, within MPMX20_01928at 2025.185 kb on - strand, within MPMX20_01928at 2025.208 kb on - strand, within MPMX20_01928at 2025.208 kb on - strand, within MPMX20_01928at 2025.222 kb on + strand, within MPMX20_01928at 2025.230 kb on - strand, within MPMX20_01928at 2025.235 kb on - strand, within MPMX20_01928at 2025.253 kb on - strandat 2025.260 kb on - strandat 2025.311 kb on + strandat 2025.311 kb on + strandat 2025.311 kb on + strandat 2025.316 kb on + strandat 2025.319 kb on - strandat 2025.324 kb on - strandat 2025.324 kb on - strandat 2025.352 kb on + strandat 2025.355 kb on - strandat 2025.356 kb on + strandat 2025.357 kb on + strandat 2025.362 kb on + strandat 2025.365 kb on - strandat 2025.366 kb on + strandat 2025.410 kb on - strand, within MPMX20_01929at 2025.417 kb on - strand, within MPMX20_01929at 2025.447 kb on + strand, within MPMX20_01929at 2025.452 kb on + strand, within MPMX20_01929at 2025.455 kb on - strand, within MPMX20_01929at 2025.455 kb on - strand, within MPMX20_01929at 2025.472 kb on + strand, within MPMX20_01929at 2025.477 kb on + strand, within MPMX20_01929at 2025.523 kb on + strand, within MPMX20_01929at 2025.525 kb on + strand, within MPMX20_01929at 2025.538 kb on - strand, within MPMX20_01929at 2025.548 kb on + strand, within MPMX20_01929at 2025.557 kb on - strand, within MPMX20_01929at 2025.575 kb on + strand, within MPMX20_01929at 2025.575 kb on + strand, within MPMX20_01929at 2025.583 kb on - strand, within MPMX20_01929at 2025.593 kb on - strand, within MPMX20_01929at 2025.615 kb on - strand, within MPMX20_01929at 2025.626 kb on + strand, within MPMX20_01929at 2025.626 kb on + strand, within MPMX20_01929at 2025.626 kb on + strand, within MPMX20_01929at 2025.626 kb on + strand, within MPMX20_01929at 2025.626 kb on + strand, within MPMX20_01929at 2025.634 kb on - strand, within MPMX20_01929at 2025.634 kb on - strand, within MPMX20_01929at 2025.634 kb on - strand, within MPMX20_01929at 2025.634 kb on - strand, within MPMX20_01929at 2025.634 kb on - strand, within MPMX20_01929at 2025.634 kb on - strand, within MPMX20_01929at 2025.649 kb on - strand, within MPMX20_01929at 2025.649 kb on - strand, within MPMX20_01929at 2025.660 kb on + strand, within MPMX20_01929at 2025.660 kb on + strand, within MPMX20_01929at 2025.702 kb on - strand, within MPMX20_01929at 2025.772 kb on + strand, within MPMX20_01929at 2025.775 kb on + strand, within MPMX20_01929at 2025.864 kb on + strand, within MPMX20_01929at 2025.864 kb on + strand, within MPMX20_01929at 2025.866 kb on + strand, within MPMX20_01929at 2025.866 kb on + strand, within MPMX20_01929at 2025.866 kb on + strand, within MPMX20_01929at 2025.866 kb on + strand, within MPMX20_01929at 2025.868 kb on + strand, within MPMX20_01929at 2025.869 kb on + strand, within MPMX20_01929at 2025.872 kb on - strand, within MPMX20_01929at 2025.874 kb on + strand, within MPMX20_01929at 2025.874 kb on - strand, within MPMX20_01929at 2025.874 kb on - strand, within MPMX20_01929at 2025.877 kb on - strand, within MPMX20_01929at 2025.884 kb on + strandat 2025.887 kb on + strandat 2025.938 kb on + strandat 2025.938 kb on + strandat 2025.945 kb on + strandat 2025.945 kb on + strandat 2025.945 kb on + strandat 2025.945 kb on + strandat 2025.945 kb on + strandat 2025.945 kb on + strandat 2025.945 kb on + strandat 2025.945 kb on + strandat 2025.945 kb on + strandat 2025.945 kb on + strandat 2025.945 kb on + strandat 2025.945 kb on + strandat 2025.953 kb on - strandat 2025.953 kb on - strandat 2025.953 kb on - strandat 2025.953 kb on - strandat 2025.953 kb on - strandat 2025.967 kb on + strandat 2025.967 kb on + strandat 2025.979 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine (C)
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2,023,574 + MPMX20_01926 0.67 -0.1
2,023,574 + MPMX20_01926 0.67 -0.5
2,023,582 - MPMX20_01926 0.68 -1.4
2,023,619 - MPMX20_01926 0.69 -0.8
2,023,663 + MPMX20_01926 0.70 -1.1
2,023,670 + MPMX20_01926 0.70 -2.1
2,023,670 + MPMX20_01926 0.70 +0.4
2,023,671 - MPMX20_01926 0.70 +0.3
2,023,703 + MPMX20_01926 0.71 -3.0
2,023,711 - MPMX20_01926 0.72 -0.8
2,023,711 - MPMX20_01926 0.72 -0.8
2,023,711 - MPMX20_01926 0.72 +0.1
2,023,806 + MPMX20_01926 0.75 -0.1
2,023,814 - MPMX20_01926 0.75 -2.5
2,023,853 - MPMX20_01926 0.76 +0.8
2,023,859 + MPMX20_01926 0.77 +0.5
2,023,867 - MPMX20_01926 0.77 -0.5
2,023,867 - MPMX20_01926 0.77 +1.4
2,023,867 - MPMX20_01926 0.77 +2.1
2,023,921 + MPMX20_01926 0.79 +1.1
2,023,930 - MPMX20_01926 0.79 +0.5
2,024,013 + MPMX20_01926 0.82 -3.6
2,024,021 - MPMX20_01926 0.82 -0.6
2,024,021 - MPMX20_01926 0.82 -0.2
2,024,021 - MPMX20_01926 0.82 -0.8
2,024,021 - MPMX20_01926 0.82 -3.2
2,024,032 - MPMX20_01926 0.82 -0.3
2,024,230 + MPMX20_01926 0.89 -0.3
2,024,243 - MPMX20_01926 0.89 +0.1
2,024,271 + -3.1
2,024,273 + -1.9
2,024,293 - +0.6
2,024,349 - +1.4
2,024,376 + -1.5
2,024,376 + -1.6
2,024,406 - -1.6
2,024,488 + +1.0
2,024,496 - -2.4
2,024,500 - -1.0
2,024,534 - +0.9
2,024,545 + +1.0
2,024,553 - +2.1
2,024,553 - -1.9
2,024,629 - MPMX20_01927 0.14 -3.7
2,024,664 + MPMX20_01927 0.23 -1.1
2,024,709 + MPMX20_01927 0.34 -1.0
2,024,717 - MPMX20_01927 0.36 -2.1
2,024,768 - MPMX20_01927 0.48 -0.5
2,024,768 - MPMX20_01927 0.48 -1.6
2,024,791 - MPMX20_01927 0.54 -1.9
2,024,823 - MPMX20_01927 0.61 +0.0
2,024,823 - MPMX20_01927 0.61 +0.9
2,024,847 + MPMX20_01927 0.67 -1.5
2,024,854 + MPMX20_01927 0.69 -0.2
2,024,854 + MPMX20_01927 0.69 -3.6
2,024,862 - MPMX20_01927 0.71 +0.5
2,024,942 + -1.9
2,025,045 - -3.1
2,025,063 + -0.7
2,025,063 + +1.5
2,025,071 - -1.3
2,025,082 + +0.3
2,025,083 + -3.5
2,025,083 + +0.3
2,025,083 + +0.2
2,025,083 + +0.1
2,025,091 - MPMX20_01928 0.12 -2.1
2,025,091 - MPMX20_01928 0.12 +1.6
2,025,136 - MPMX20_01928 0.35 -0.2
2,025,140 - MPMX20_01928 0.37 -1.9
2,025,163 - MPMX20_01928 0.49 -1.3
2,025,173 - MPMX20_01928 0.54 -0.1
2,025,185 - MPMX20_01928 0.61 -1.8
2,025,208 - MPMX20_01928 0.72 +1.2
2,025,208 - MPMX20_01928 0.72 -0.7
2,025,222 + MPMX20_01928 0.79 -0.3
2,025,230 - MPMX20_01928 0.84 +0.4
2,025,235 - MPMX20_01928 0.86 -0.2
2,025,253 - +2.5
2,025,260 - +0.4
2,025,311 + -1.4
2,025,311 + -0.1
2,025,311 + -2.7
2,025,316 + +1.7
2,025,319 - +1.7
2,025,324 - +0.6
2,025,324 - -0.8
2,025,352 + -3.7
2,025,355 - +1.3
2,025,356 + -1.1
2,025,357 + -1.3
2,025,362 + -1.1
2,025,365 - -2.6
2,025,366 + -0.8
2,025,410 - MPMX20_01929 0.15 -2.9
2,025,417 - MPMX20_01929 0.17 +0.7
2,025,447 + MPMX20_01929 0.21 -2.4
2,025,452 + MPMX20_01929 0.22 +2.3
2,025,455 - MPMX20_01929 0.23 +1.3
2,025,455 - MPMX20_01929 0.23 -1.9
2,025,472 + MPMX20_01929 0.25 +0.4
2,025,477 + MPMX20_01929 0.26 -0.5
2,025,523 + MPMX20_01929 0.33 +1.0
2,025,525 + MPMX20_01929 0.34 -2.1
2,025,538 - MPMX20_01929 0.36 -1.9
2,025,548 + MPMX20_01929 0.37 -2.1
2,025,557 - MPMX20_01929 0.39 -2.7
2,025,575 + MPMX20_01929 0.42 +0.5
2,025,575 + MPMX20_01929 0.42 -2.6
2,025,583 - MPMX20_01929 0.43 +0.8
2,025,593 - MPMX20_01929 0.44 -1.1
2,025,615 - MPMX20_01929 0.48 -1.9
2,025,626 + MPMX20_01929 0.50 -3.1
2,025,626 + MPMX20_01929 0.50 -2.2
2,025,626 + MPMX20_01929 0.50 -4.1
2,025,626 + MPMX20_01929 0.50 -1.3
2,025,626 + MPMX20_01929 0.50 +3.2
2,025,634 - MPMX20_01929 0.51 -0.7
2,025,634 - MPMX20_01929 0.51 +1.3
2,025,634 - MPMX20_01929 0.51 +1.7
2,025,634 - MPMX20_01929 0.51 +0.7
2,025,634 - MPMX20_01929 0.51 -0.1
2,025,634 - MPMX20_01929 0.51 -0.5
2,025,649 - MPMX20_01929 0.53 -0.8
2,025,649 - MPMX20_01929 0.53 +1.5
2,025,660 + MPMX20_01929 0.55 -0.6
2,025,660 + MPMX20_01929 0.55 +1.7
2,025,702 - MPMX20_01929 0.62 +0.2
2,025,772 + MPMX20_01929 0.73 -1.6
2,025,775 + MPMX20_01929 0.73 +0.6
2,025,864 + MPMX20_01929 0.87 -0.5
2,025,864 + MPMX20_01929 0.87 +0.8
2,025,866 + MPMX20_01929 0.88 -0.6
2,025,866 + MPMX20_01929 0.88 -3.2
2,025,866 + MPMX20_01929 0.88 +1.3
2,025,866 + MPMX20_01929 0.88 +0.3
2,025,868 + MPMX20_01929 0.88 +1.2
2,025,869 + MPMX20_01929 0.88 -3.9
2,025,872 - MPMX20_01929 0.89 -1.8
2,025,874 + MPMX20_01929 0.89 -3.1
2,025,874 - MPMX20_01929 0.89 +1.6
2,025,874 - MPMX20_01929 0.89 -2.1
2,025,877 - MPMX20_01929 0.90 -0.8
2,025,884 + +0.2
2,025,887 + -1.1
2,025,938 + -1.8
2,025,938 + -1.3
2,025,945 + -1.1
2,025,945 + -2.4
2,025,945 + -2.4
2,025,945 + +1.0
2,025,945 + +2.4
2,025,945 + -3.5
2,025,945 + -1.8
2,025,945 + +2.1
2,025,945 + -3.2
2,025,945 + -2.5
2,025,945 + -1.9
2,025,945 + -1.6
2,025,953 - -0.5
2,025,953 - -2.1
2,025,953 - -0.8
2,025,953 - -1.3
2,025,953 - -1.1
2,025,967 + -1.1
2,025,967 + -0.1
2,025,979 + -2.1

Or see this region's nucleotide sequence