Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01926 and MPMX20_01927 overlap by 4 nucleotides MPMX20_01927 and MPMX20_01928 are separated by 85 nucleotides MPMX20_01928 and MPMX20_01929 are separated by 51 nucleotides
MPMX20_01926: MPMX20_01926 - hypothetical protein, at 2,021,518 to 2,024,574
_01926
MPMX20_01927: MPMX20_01927 - 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, at 2,024,571 to 2,024,981
_01927
MPMX20_01928: MPMX20_01928 - hypothetical protein, at 2,025,067 to 2,025,261
_01928
MPMX20_01929: MPMX20_01929 - Inhibitor of hydrogen peroxide resistance, at 2,025,313 to 2,025,942
_01929
Position (kb)
2024
2025 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2023.574 kb on + strand, within MPMX20_01926 at 2023.574 kb on + strand, within MPMX20_01926 at 2023.582 kb on - strand, within MPMX20_01926 at 2023.619 kb on - strand, within MPMX20_01926 at 2023.663 kb on + strand, within MPMX20_01926 at 2023.670 kb on + strand, within MPMX20_01926 at 2023.670 kb on + strand, within MPMX20_01926 at 2023.671 kb on - strand, within MPMX20_01926 at 2023.703 kb on + strand, within MPMX20_01926 at 2023.711 kb on - strand, within MPMX20_01926 at 2023.711 kb on - strand, within MPMX20_01926 at 2023.711 kb on - strand, within MPMX20_01926 at 2023.806 kb on + strand, within MPMX20_01926 at 2023.814 kb on - strand, within MPMX20_01926 at 2023.853 kb on - strand, within MPMX20_01926 at 2023.859 kb on + strand, within MPMX20_01926 at 2023.867 kb on - strand, within MPMX20_01926 at 2023.867 kb on - strand, within MPMX20_01926 at 2023.867 kb on - strand, within MPMX20_01926 at 2023.921 kb on + strand, within MPMX20_01926 at 2023.930 kb on - strand, within MPMX20_01926 at 2024.013 kb on + strand, within MPMX20_01926 at 2024.021 kb on - strand, within MPMX20_01926 at 2024.021 kb on - strand, within MPMX20_01926 at 2024.021 kb on - strand, within MPMX20_01926 at 2024.021 kb on - strand, within MPMX20_01926 at 2024.032 kb on - strand, within MPMX20_01926 at 2024.230 kb on + strand, within MPMX20_01926 at 2024.243 kb on - strand, within MPMX20_01926 at 2024.271 kb on + strand at 2024.273 kb on + strand at 2024.293 kb on - strand at 2024.349 kb on - strand at 2024.376 kb on + strand at 2024.376 kb on + strand at 2024.406 kb on - strand at 2024.488 kb on + strand at 2024.496 kb on - strand at 2024.500 kb on - strand at 2024.534 kb on - strand at 2024.545 kb on + strand at 2024.553 kb on - strand at 2024.553 kb on - strand at 2024.629 kb on - strand, within MPMX20_01927 at 2024.664 kb on + strand, within MPMX20_01927 at 2024.709 kb on + strand, within MPMX20_01927 at 2024.717 kb on - strand, within MPMX20_01927 at 2024.768 kb on - strand, within MPMX20_01927 at 2024.768 kb on - strand, within MPMX20_01927 at 2024.791 kb on - strand, within MPMX20_01927 at 2024.823 kb on - strand, within MPMX20_01927 at 2024.823 kb on - strand, within MPMX20_01927 at 2024.847 kb on + strand, within MPMX20_01927 at 2024.854 kb on + strand, within MPMX20_01927 at 2024.854 kb on + strand, within MPMX20_01927 at 2024.862 kb on - strand, within MPMX20_01927 at 2024.942 kb on + strand at 2025.045 kb on - strand at 2025.063 kb on + strand at 2025.063 kb on + strand at 2025.071 kb on - strand at 2025.082 kb on + strand at 2025.083 kb on + strand at 2025.083 kb on + strand at 2025.083 kb on + strand at 2025.083 kb on + strand at 2025.091 kb on - strand, within MPMX20_01928 at 2025.091 kb on - strand, within MPMX20_01928 at 2025.136 kb on - strand, within MPMX20_01928 at 2025.140 kb on - strand, within MPMX20_01928 at 2025.163 kb on - strand, within MPMX20_01928 at 2025.173 kb on - strand, within MPMX20_01928 at 2025.185 kb on - strand, within MPMX20_01928 at 2025.208 kb on - strand, within MPMX20_01928 at 2025.208 kb on - strand, within MPMX20_01928 at 2025.222 kb on + strand, within MPMX20_01928 at 2025.230 kb on - strand, within MPMX20_01928 at 2025.235 kb on - strand, within MPMX20_01928 at 2025.253 kb on - strand at 2025.260 kb on - strand at 2025.311 kb on + strand at 2025.311 kb on + strand at 2025.311 kb on + strand at 2025.316 kb on + strand at 2025.319 kb on - strand at 2025.324 kb on - strand at 2025.324 kb on - strand at 2025.352 kb on + strand at 2025.355 kb on - strand at 2025.356 kb on + strand at 2025.357 kb on + strand at 2025.362 kb on + strand at 2025.365 kb on - strand at 2025.366 kb on + strand at 2025.410 kb on - strand, within MPMX20_01929 at 2025.417 kb on - strand, within MPMX20_01929 at 2025.447 kb on + strand, within MPMX20_01929 at 2025.452 kb on + strand, within MPMX20_01929 at 2025.455 kb on - strand, within MPMX20_01929 at 2025.455 kb on - strand, within MPMX20_01929 at 2025.472 kb on + strand, within MPMX20_01929 at 2025.477 kb on + strand, within MPMX20_01929 at 2025.523 kb on + strand, within MPMX20_01929 at 2025.525 kb on + strand, within MPMX20_01929 at 2025.538 kb on - strand, within MPMX20_01929 at 2025.548 kb on + strand, within MPMX20_01929 at 2025.557 kb on - strand, within MPMX20_01929 at 2025.575 kb on + strand, within MPMX20_01929 at 2025.575 kb on + strand, within MPMX20_01929 at 2025.583 kb on - strand, within MPMX20_01929 at 2025.593 kb on - strand, within MPMX20_01929 at 2025.615 kb on - strand, within MPMX20_01929 at 2025.626 kb on + strand, within MPMX20_01929 at 2025.626 kb on + strand, within MPMX20_01929 at 2025.626 kb on + strand, within MPMX20_01929 at 2025.626 kb on + strand, within MPMX20_01929 at 2025.626 kb on + strand, within MPMX20_01929 at 2025.634 kb on - strand, within MPMX20_01929 at 2025.634 kb on - strand, within MPMX20_01929 at 2025.634 kb on - strand, within MPMX20_01929 at 2025.634 kb on - strand, within MPMX20_01929 at 2025.634 kb on - strand, within MPMX20_01929 at 2025.634 kb on - strand, within MPMX20_01929 at 2025.649 kb on - strand, within MPMX20_01929 at 2025.649 kb on - strand, within MPMX20_01929 at 2025.660 kb on + strand, within MPMX20_01929 at 2025.660 kb on + strand, within MPMX20_01929 at 2025.702 kb on - strand, within MPMX20_01929 at 2025.772 kb on + strand, within MPMX20_01929 at 2025.775 kb on + strand, within MPMX20_01929 at 2025.864 kb on + strand, within MPMX20_01929 at 2025.864 kb on + strand, within MPMX20_01929 at 2025.866 kb on + strand, within MPMX20_01929 at 2025.866 kb on + strand, within MPMX20_01929 at 2025.866 kb on + strand, within MPMX20_01929 at 2025.866 kb on + strand, within MPMX20_01929 at 2025.868 kb on + strand, within MPMX20_01929 at 2025.869 kb on + strand, within MPMX20_01929 at 2025.872 kb on - strand, within MPMX20_01929 at 2025.874 kb on + strand, within MPMX20_01929 at 2025.874 kb on - strand, within MPMX20_01929 at 2025.874 kb on - strand, within MPMX20_01929 at 2025.877 kb on - strand, within MPMX20_01929 at 2025.884 kb on + strand at 2025.887 kb on + strand at 2025.938 kb on + strand at 2025.938 kb on + strand at 2025.945 kb on + strand at 2025.945 kb on + strand at 2025.945 kb on + strand at 2025.945 kb on + strand at 2025.945 kb on + strand at 2025.945 kb on + strand at 2025.945 kb on + strand at 2025.945 kb on + strand at 2025.945 kb on + strand at 2025.945 kb on + strand at 2025.945 kb on + strand at 2025.945 kb on + strand at 2025.953 kb on - strand at 2025.953 kb on - strand at 2025.953 kb on - strand at 2025.953 kb on - strand at 2025.953 kb on - strand at 2025.967 kb on + strand at 2025.967 kb on + strand at 2025.979 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 2,023,574 + MPMX20_01926 0.67 -0.1 2,023,574 + MPMX20_01926 0.67 -0.5 2,023,582 - MPMX20_01926 0.68 -1.4 2,023,619 - MPMX20_01926 0.69 -0.8 2,023,663 + MPMX20_01926 0.70 -1.1 2,023,670 + MPMX20_01926 0.70 -2.1 2,023,670 + MPMX20_01926 0.70 +0.4 2,023,671 - MPMX20_01926 0.70 +0.3 2,023,703 + MPMX20_01926 0.71 -3.0 2,023,711 - MPMX20_01926 0.72 -0.8 2,023,711 - MPMX20_01926 0.72 -0.8 2,023,711 - MPMX20_01926 0.72 +0.1 2,023,806 + MPMX20_01926 0.75 -0.1 2,023,814 - MPMX20_01926 0.75 -2.5 2,023,853 - MPMX20_01926 0.76 +0.8 2,023,859 + MPMX20_01926 0.77 +0.5 2,023,867 - MPMX20_01926 0.77 -0.5 2,023,867 - MPMX20_01926 0.77 +1.4 2,023,867 - MPMX20_01926 0.77 +2.1 2,023,921 + MPMX20_01926 0.79 +1.1 2,023,930 - MPMX20_01926 0.79 +0.5 2,024,013 + MPMX20_01926 0.82 -3.6 2,024,021 - MPMX20_01926 0.82 -0.6 2,024,021 - MPMX20_01926 0.82 -0.2 2,024,021 - MPMX20_01926 0.82 -0.8 2,024,021 - MPMX20_01926 0.82 -3.2 2,024,032 - MPMX20_01926 0.82 -0.3 2,024,230 + MPMX20_01926 0.89 -0.3 2,024,243 - MPMX20_01926 0.89 +0.1 2,024,271 + -3.1 2,024,273 + -1.9 2,024,293 - +0.6 2,024,349 - +1.4 2,024,376 + -1.5 2,024,376 + -1.6 2,024,406 - -1.6 2,024,488 + +1.0 2,024,496 - -2.4 2,024,500 - -1.0 2,024,534 - +0.9 2,024,545 + +1.0 2,024,553 - +2.1 2,024,553 - -1.9 2,024,629 - MPMX20_01927 0.14 -3.7 2,024,664 + MPMX20_01927 0.23 -1.1 2,024,709 + MPMX20_01927 0.34 -1.0 2,024,717 - MPMX20_01927 0.36 -2.1 2,024,768 - MPMX20_01927 0.48 -0.5 2,024,768 - MPMX20_01927 0.48 -1.6 2,024,791 - MPMX20_01927 0.54 -1.9 2,024,823 - MPMX20_01927 0.61 +0.0 2,024,823 - MPMX20_01927 0.61 +0.9 2,024,847 + MPMX20_01927 0.67 -1.5 2,024,854 + MPMX20_01927 0.69 -0.2 2,024,854 + MPMX20_01927 0.69 -3.6 2,024,862 - MPMX20_01927 0.71 +0.5 2,024,942 + -1.9 2,025,045 - -3.1 2,025,063 + -0.7 2,025,063 + +1.5 2,025,071 - -1.3 2,025,082 + +0.3 2,025,083 + -3.5 2,025,083 + +0.3 2,025,083 + +0.2 2,025,083 + +0.1 2,025,091 - MPMX20_01928 0.12 -2.1 2,025,091 - MPMX20_01928 0.12 +1.6 2,025,136 - MPMX20_01928 0.35 -0.2 2,025,140 - MPMX20_01928 0.37 -1.9 2,025,163 - MPMX20_01928 0.49 -1.3 2,025,173 - MPMX20_01928 0.54 -0.1 2,025,185 - MPMX20_01928 0.61 -1.8 2,025,208 - MPMX20_01928 0.72 +1.2 2,025,208 - MPMX20_01928 0.72 -0.7 2,025,222 + MPMX20_01928 0.79 -0.3 2,025,230 - MPMX20_01928 0.84 +0.4 2,025,235 - MPMX20_01928 0.86 -0.2 2,025,253 - +2.5 2,025,260 - +0.4 2,025,311 + -1.4 2,025,311 + -0.1 2,025,311 + -2.7 2,025,316 + +1.7 2,025,319 - +1.7 2,025,324 - +0.6 2,025,324 - -0.8 2,025,352 + -3.7 2,025,355 - +1.3 2,025,356 + -1.1 2,025,357 + -1.3 2,025,362 + -1.1 2,025,365 - -2.6 2,025,366 + -0.8 2,025,410 - MPMX20_01929 0.15 -2.9 2,025,417 - MPMX20_01929 0.17 +0.7 2,025,447 + MPMX20_01929 0.21 -2.4 2,025,452 + MPMX20_01929 0.22 +2.3 2,025,455 - MPMX20_01929 0.23 +1.3 2,025,455 - MPMX20_01929 0.23 -1.9 2,025,472 + MPMX20_01929 0.25 +0.4 2,025,477 + MPMX20_01929 0.26 -0.5 2,025,523 + MPMX20_01929 0.33 +1.0 2,025,525 + MPMX20_01929 0.34 -2.1 2,025,538 - MPMX20_01929 0.36 -1.9 2,025,548 + MPMX20_01929 0.37 -2.1 2,025,557 - MPMX20_01929 0.39 -2.7 2,025,575 + MPMX20_01929 0.42 +0.5 2,025,575 + MPMX20_01929 0.42 -2.6 2,025,583 - MPMX20_01929 0.43 +0.8 2,025,593 - MPMX20_01929 0.44 -1.1 2,025,615 - MPMX20_01929 0.48 -1.9 2,025,626 + MPMX20_01929 0.50 -3.1 2,025,626 + MPMX20_01929 0.50 -2.2 2,025,626 + MPMX20_01929 0.50 -4.1 2,025,626 + MPMX20_01929 0.50 -1.3 2,025,626 + MPMX20_01929 0.50 +3.2 2,025,634 - MPMX20_01929 0.51 -0.7 2,025,634 - MPMX20_01929 0.51 +1.3 2,025,634 - MPMX20_01929 0.51 +1.7 2,025,634 - MPMX20_01929 0.51 +0.7 2,025,634 - MPMX20_01929 0.51 -0.1 2,025,634 - MPMX20_01929 0.51 -0.5 2,025,649 - MPMX20_01929 0.53 -0.8 2,025,649 - MPMX20_01929 0.53 +1.5 2,025,660 + MPMX20_01929 0.55 -0.6 2,025,660 + MPMX20_01929 0.55 +1.7 2,025,702 - MPMX20_01929 0.62 +0.2 2,025,772 + MPMX20_01929 0.73 -1.6 2,025,775 + MPMX20_01929 0.73 +0.6 2,025,864 + MPMX20_01929 0.87 -0.5 2,025,864 + MPMX20_01929 0.87 +0.8 2,025,866 + MPMX20_01929 0.88 -0.6 2,025,866 + MPMX20_01929 0.88 -3.2 2,025,866 + MPMX20_01929 0.88 +1.3 2,025,866 + MPMX20_01929 0.88 +0.3 2,025,868 + MPMX20_01929 0.88 +1.2 2,025,869 + MPMX20_01929 0.88 -3.9 2,025,872 - MPMX20_01929 0.89 -1.8 2,025,874 + MPMX20_01929 0.89 -3.1 2,025,874 - MPMX20_01929 0.89 +1.6 2,025,874 - MPMX20_01929 0.89 -2.1 2,025,877 - MPMX20_01929 0.90 -0.8 2,025,884 + +0.2 2,025,887 + -1.1 2,025,938 + -1.8 2,025,938 + -1.3 2,025,945 + -1.1 2,025,945 + -2.4 2,025,945 + -2.4 2,025,945 + +1.0 2,025,945 + +2.4 2,025,945 + -3.5 2,025,945 + -1.8 2,025,945 + +2.1 2,025,945 + -3.2 2,025,945 + -2.5 2,025,945 + -1.9 2,025,945 + -1.6 2,025,953 - -0.5 2,025,953 - -2.1 2,025,953 - -0.8 2,025,953 - -1.3 2,025,953 - -1.1 2,025,967 + -1.1 2,025,967 + -0.1 2,025,979 + -2.1
Or see this region's nucleotide sequence