Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03590

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03588 and MPMX20_03589 are separated by 15 nucleotidesMPMX20_03589 and MPMX20_03590 are separated by 61 nucleotidesMPMX20_03590 and MPMX20_03591 are separated by 63 nucleotidesMPMX20_03591 and MPMX20_03592 overlap by 8 nucleotides MPMX20_03588: MPMX20_03588 - PTS system glucitol/sorbitol-specific EIIA component, at 3,777,524 to 3,777,886 _03588 MPMX20_03589: MPMX20_03589 - Sorbitol-6-phosphate 2-dehydrogenase, at 3,777,902 to 3,778,681 _03589 MPMX20_03590: MPMX20_03590 - hypothetical protein, at 3,778,743 to 3,779,102 _03590 MPMX20_03591: MPMX20_03591 - Glucitol operon repressor, at 3,779,166 to 3,779,939 _03591 MPMX20_03592: MPMX20_03592 - Arabinose 5-phosphate isomerase GutQ, at 3,779,932 to 3,780,897 _03592 Position (kb) 3778 3779 3780Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3777.747 kb on + strand, within MPMX20_03588at 3777.847 kb on + strand, within MPMX20_03588at 3777.857 kb on - strandat 3777.868 kb on - strandat 3777.976 kb on + strandat 3777.976 kb on + strandat 3777.976 kb on + strandat 3777.976 kb on + strandat 3777.976 kb on + strandat 3777.984 kb on - strand, within MPMX20_03589at 3777.984 kb on - strand, within MPMX20_03589at 3777.984 kb on - strand, within MPMX20_03589at 3777.984 kb on - strand, within MPMX20_03589at 3777.984 kb on - strand, within MPMX20_03589at 3778.060 kb on - strand, within MPMX20_03589at 3778.089 kb on + strand, within MPMX20_03589at 3778.152 kb on + strand, within MPMX20_03589at 3778.162 kb on - strand, within MPMX20_03589at 3778.162 kb on - strand, within MPMX20_03589at 3778.162 kb on - strand, within MPMX20_03589at 3778.164 kb on + strand, within MPMX20_03589at 3778.164 kb on + strand, within MPMX20_03589at 3778.169 kb on + strand, within MPMX20_03589at 3778.172 kb on - strand, within MPMX20_03589at 3778.205 kb on - strand, within MPMX20_03589at 3778.231 kb on + strand, within MPMX20_03589at 3778.231 kb on + strand, within MPMX20_03589at 3778.361 kb on - strand, within MPMX20_03589at 3778.361 kb on - strand, within MPMX20_03589at 3778.383 kb on + strand, within MPMX20_03589at 3778.391 kb on - strand, within MPMX20_03589at 3778.535 kb on + strand, within MPMX20_03589at 3778.540 kb on + strand, within MPMX20_03589at 3778.548 kb on - strand, within MPMX20_03589at 3778.548 kb on - strand, within MPMX20_03589at 3778.635 kb on + strandat 3778.635 kb on + strandat 3778.655 kb on - strandat 3778.662 kb on + strandat 3778.683 kb on - strandat 3778.852 kb on - strand, within MPMX20_03590at 3778.852 kb on - strand, within MPMX20_03590at 3778.917 kb on - strand, within MPMX20_03590at 3778.968 kb on - strand, within MPMX20_03590at 3779.057 kb on - strand, within MPMX20_03590at 3779.067 kb on - strandat 3779.265 kb on - strand, within MPMX20_03591at 3779.329 kb on + strand, within MPMX20_03591at 3779.337 kb on - strand, within MPMX20_03591at 3779.381 kb on + strand, within MPMX20_03591at 3779.389 kb on - strand, within MPMX20_03591at 3779.389 kb on - strand, within MPMX20_03591at 3779.446 kb on + strand, within MPMX20_03591at 3779.470 kb on - strand, within MPMX20_03591at 3779.470 kb on - strand, within MPMX20_03591at 3779.558 kb on + strand, within MPMX20_03591at 3779.558 kb on - strand, within MPMX20_03591at 3779.670 kb on + strand, within MPMX20_03591at 3779.678 kb on - strand, within MPMX20_03591at 3779.687 kb on - strand, within MPMX20_03591at 3779.689 kb on + strand, within MPMX20_03591at 3779.735 kb on - strand, within MPMX20_03591at 3779.750 kb on + strand, within MPMX20_03591at 3779.758 kb on - strand, within MPMX20_03591at 3779.758 kb on - strand, within MPMX20_03591at 3779.820 kb on + strand, within MPMX20_03591at 3779.854 kb on - strand, within MPMX20_03591at 3779.854 kb on - strand, within MPMX20_03591at 3779.854 kb on - strand, within MPMX20_03591at 3779.870 kb on - strandat 3779.968 kb on - strandat 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.049 kb on - strand, within MPMX20_03592at 3780.049 kb on - strand, within MPMX20_03592

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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3,777,747 + MPMX20_03588 0.61 +0.1
3,777,847 + MPMX20_03588 0.89 +0.2
3,777,857 - -0.8
3,777,868 - -0.2
3,777,976 + -0.3
3,777,976 + +0.6
3,777,976 + -1.4
3,777,976 + -0.4
3,777,976 + +0.0
3,777,984 - MPMX20_03589 0.11 +0.5
3,777,984 - MPMX20_03589 0.11 -0.4
3,777,984 - MPMX20_03589 0.11 +0.5
3,777,984 - MPMX20_03589 0.11 -1.2
3,777,984 - MPMX20_03589 0.11 +0.2
3,778,060 - MPMX20_03589 0.20 +0.2
3,778,089 + MPMX20_03589 0.24 +0.4
3,778,152 + MPMX20_03589 0.32 +1.0
3,778,162 - MPMX20_03589 0.33 -1.0
3,778,162 - MPMX20_03589 0.33 -1.1
3,778,162 - MPMX20_03589 0.33 -0.3
3,778,164 + MPMX20_03589 0.34 -0.1
3,778,164 + MPMX20_03589 0.34 -0.4
3,778,169 + MPMX20_03589 0.34 -0.7
3,778,172 - MPMX20_03589 0.35 -0.0
3,778,205 - MPMX20_03589 0.39 +0.2
3,778,231 + MPMX20_03589 0.42 +2.0
3,778,231 + MPMX20_03589 0.42 -0.3
3,778,361 - MPMX20_03589 0.59 -0.6
3,778,361 - MPMX20_03589 0.59 +2.5
3,778,383 + MPMX20_03589 0.62 +3.5
3,778,391 - MPMX20_03589 0.63 -1.5
3,778,535 + MPMX20_03589 0.81 -0.0
3,778,540 + MPMX20_03589 0.82 +0.2
3,778,548 - MPMX20_03589 0.83 +0.2
3,778,548 - MPMX20_03589 0.83 +2.0
3,778,635 + +0.7
3,778,635 + -2.5
3,778,655 - +0.5
3,778,662 + -0.2
3,778,683 - -0.3
3,778,852 - MPMX20_03590 0.30 +0.2
3,778,852 - MPMX20_03590 0.30 -1.4
3,778,917 - MPMX20_03590 0.48 +0.4
3,778,968 - MPMX20_03590 0.62 -0.1
3,779,057 - MPMX20_03590 0.87 +0.0
3,779,067 - +0.9
3,779,265 - MPMX20_03591 0.13 -3.6
3,779,329 + MPMX20_03591 0.21 -0.2
3,779,337 - MPMX20_03591 0.22 +1.8
3,779,381 + MPMX20_03591 0.28 -3.6
3,779,389 - MPMX20_03591 0.29 -2.5
3,779,389 - MPMX20_03591 0.29 -2.8
3,779,446 + MPMX20_03591 0.36 -4.2
3,779,470 - MPMX20_03591 0.39 -3.5
3,779,470 - MPMX20_03591 0.39 -2.1
3,779,558 + MPMX20_03591 0.51 -0.7
3,779,558 - MPMX20_03591 0.51 -3.8
3,779,670 + MPMX20_03591 0.65 -2.2
3,779,678 - MPMX20_03591 0.66 -4.4
3,779,687 - MPMX20_03591 0.67 -0.8
3,779,689 + MPMX20_03591 0.68 -1.4
3,779,735 - MPMX20_03591 0.74 -4.1
3,779,750 + MPMX20_03591 0.75 -3.2
3,779,758 - MPMX20_03591 0.76 -3.3
3,779,758 - MPMX20_03591 0.76 -3.9
3,779,820 + MPMX20_03591 0.84 -3.0
3,779,854 - MPMX20_03591 0.89 -3.8
3,779,854 - MPMX20_03591 0.89 +0.2
3,779,854 - MPMX20_03591 0.89 -3.0
3,779,870 - -3.1
3,779,968 - -0.3
3,780,041 + MPMX20_03592 0.11 +0.9
3,780,041 + MPMX20_03592 0.11 -0.8
3,780,041 + MPMX20_03592 0.11 -0.4
3,780,041 + MPMX20_03592 0.11 +0.7
3,780,049 - MPMX20_03592 0.12 -0.8
3,780,049 - MPMX20_03592 0.12 +1.0

Or see this region's nucleotide sequence