Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03588 and MPMX20_03589 are separated by 15 nucleotides MPMX20_03589 and MPMX20_03590 are separated by 61 nucleotides MPMX20_03590 and MPMX20_03591 are separated by 63 nucleotides MPMX20_03591 and MPMX20_03592 overlap by 8 nucleotides
MPMX20_03588: MPMX20_03588 - PTS system glucitol/sorbitol-specific EIIA component, at 3,777,524 to 3,777,886
_03588
MPMX20_03589: MPMX20_03589 - Sorbitol-6-phosphate 2-dehydrogenase, at 3,777,902 to 3,778,681
_03589
MPMX20_03590: MPMX20_03590 - hypothetical protein, at 3,778,743 to 3,779,102
_03590
MPMX20_03591: MPMX20_03591 - Glucitol operon repressor, at 3,779,166 to 3,779,939
_03591
MPMX20_03592: MPMX20_03592 - Arabinose 5-phosphate isomerase GutQ, at 3,779,932 to 3,780,897
_03592
Position (kb)
3778
3779
3780 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3777.747 kb on + strand, within MPMX20_03588 at 3777.847 kb on + strand, within MPMX20_03588 at 3777.857 kb on - strand at 3777.868 kb on - strand at 3777.976 kb on + strand at 3777.976 kb on + strand at 3777.976 kb on + strand at 3777.976 kb on + strand at 3777.976 kb on + strand at 3777.984 kb on - strand, within MPMX20_03589 at 3777.984 kb on - strand, within MPMX20_03589 at 3777.984 kb on - strand, within MPMX20_03589 at 3777.984 kb on - strand, within MPMX20_03589 at 3777.984 kb on - strand, within MPMX20_03589 at 3778.060 kb on - strand, within MPMX20_03589 at 3778.089 kb on + strand, within MPMX20_03589 at 3778.152 kb on + strand, within MPMX20_03589 at 3778.162 kb on - strand, within MPMX20_03589 at 3778.162 kb on - strand, within MPMX20_03589 at 3778.162 kb on - strand, within MPMX20_03589 at 3778.164 kb on + strand, within MPMX20_03589 at 3778.164 kb on + strand, within MPMX20_03589 at 3778.169 kb on + strand, within MPMX20_03589 at 3778.172 kb on - strand, within MPMX20_03589 at 3778.205 kb on - strand, within MPMX20_03589 at 3778.231 kb on + strand, within MPMX20_03589 at 3778.231 kb on + strand, within MPMX20_03589 at 3778.361 kb on - strand, within MPMX20_03589 at 3778.361 kb on - strand, within MPMX20_03589 at 3778.383 kb on + strand, within MPMX20_03589 at 3778.391 kb on - strand, within MPMX20_03589 at 3778.535 kb on + strand, within MPMX20_03589 at 3778.540 kb on + strand, within MPMX20_03589 at 3778.548 kb on - strand, within MPMX20_03589 at 3778.548 kb on - strand, within MPMX20_03589 at 3778.635 kb on + strand at 3778.635 kb on + strand at 3778.655 kb on - strand at 3778.662 kb on + strand at 3778.683 kb on - strand at 3778.852 kb on - strand, within MPMX20_03590 at 3778.852 kb on - strand, within MPMX20_03590 at 3778.917 kb on - strand, within MPMX20_03590 at 3778.968 kb on - strand, within MPMX20_03590 at 3779.057 kb on - strand, within MPMX20_03590 at 3779.067 kb on - strand at 3779.265 kb on - strand, within MPMX20_03591 at 3779.329 kb on + strand, within MPMX20_03591 at 3779.337 kb on - strand, within MPMX20_03591 at 3779.381 kb on + strand, within MPMX20_03591 at 3779.389 kb on - strand, within MPMX20_03591 at 3779.389 kb on - strand, within MPMX20_03591 at 3779.446 kb on + strand, within MPMX20_03591 at 3779.470 kb on - strand, within MPMX20_03591 at 3779.470 kb on - strand, within MPMX20_03591 at 3779.558 kb on + strand, within MPMX20_03591 at 3779.558 kb on - strand, within MPMX20_03591 at 3779.670 kb on + strand, within MPMX20_03591 at 3779.678 kb on - strand, within MPMX20_03591 at 3779.687 kb on - strand, within MPMX20_03591 at 3779.689 kb on + strand, within MPMX20_03591 at 3779.735 kb on - strand, within MPMX20_03591 at 3779.750 kb on + strand, within MPMX20_03591 at 3779.758 kb on - strand, within MPMX20_03591 at 3779.758 kb on - strand, within MPMX20_03591 at 3779.820 kb on + strand, within MPMX20_03591 at 3779.854 kb on - strand, within MPMX20_03591 at 3779.854 kb on - strand, within MPMX20_03591 at 3779.854 kb on - strand, within MPMX20_03591 at 3779.870 kb on - strand at 3779.968 kb on - strand at 3780.041 kb on + strand, within MPMX20_03592 at 3780.041 kb on + strand, within MPMX20_03592 at 3780.041 kb on + strand, within MPMX20_03592 at 3780.041 kb on + strand, within MPMX20_03592 at 3780.049 kb on - strand, within MPMX20_03592 at 3780.049 kb on - strand, within MPMX20_03592
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 3,777,747 + MPMX20_03588 0.61 +0.1 3,777,847 + MPMX20_03588 0.89 +0.2 3,777,857 - -0.8 3,777,868 - -0.2 3,777,976 + -0.3 3,777,976 + +0.6 3,777,976 + -1.4 3,777,976 + -0.4 3,777,976 + +0.0 3,777,984 - MPMX20_03589 0.11 +0.5 3,777,984 - MPMX20_03589 0.11 -0.4 3,777,984 - MPMX20_03589 0.11 +0.5 3,777,984 - MPMX20_03589 0.11 -1.2 3,777,984 - MPMX20_03589 0.11 +0.2 3,778,060 - MPMX20_03589 0.20 +0.2 3,778,089 + MPMX20_03589 0.24 +0.4 3,778,152 + MPMX20_03589 0.32 +1.0 3,778,162 - MPMX20_03589 0.33 -1.0 3,778,162 - MPMX20_03589 0.33 -1.1 3,778,162 - MPMX20_03589 0.33 -0.3 3,778,164 + MPMX20_03589 0.34 -0.1 3,778,164 + MPMX20_03589 0.34 -0.4 3,778,169 + MPMX20_03589 0.34 -0.7 3,778,172 - MPMX20_03589 0.35 -0.0 3,778,205 - MPMX20_03589 0.39 +0.2 3,778,231 + MPMX20_03589 0.42 +2.0 3,778,231 + MPMX20_03589 0.42 -0.3 3,778,361 - MPMX20_03589 0.59 -0.6 3,778,361 - MPMX20_03589 0.59 +2.5 3,778,383 + MPMX20_03589 0.62 +3.5 3,778,391 - MPMX20_03589 0.63 -1.5 3,778,535 + MPMX20_03589 0.81 -0.0 3,778,540 + MPMX20_03589 0.82 +0.2 3,778,548 - MPMX20_03589 0.83 +0.2 3,778,548 - MPMX20_03589 0.83 +2.0 3,778,635 + +0.7 3,778,635 + -2.5 3,778,655 - +0.5 3,778,662 + -0.2 3,778,683 - -0.3 3,778,852 - MPMX20_03590 0.30 +0.2 3,778,852 - MPMX20_03590 0.30 -1.4 3,778,917 - MPMX20_03590 0.48 +0.4 3,778,968 - MPMX20_03590 0.62 -0.1 3,779,057 - MPMX20_03590 0.87 +0.0 3,779,067 - +0.9 3,779,265 - MPMX20_03591 0.13 -3.6 3,779,329 + MPMX20_03591 0.21 -0.2 3,779,337 - MPMX20_03591 0.22 +1.8 3,779,381 + MPMX20_03591 0.28 -3.6 3,779,389 - MPMX20_03591 0.29 -2.5 3,779,389 - MPMX20_03591 0.29 -2.8 3,779,446 + MPMX20_03591 0.36 -4.2 3,779,470 - MPMX20_03591 0.39 -3.5 3,779,470 - MPMX20_03591 0.39 -2.1 3,779,558 + MPMX20_03591 0.51 -0.7 3,779,558 - MPMX20_03591 0.51 -3.8 3,779,670 + MPMX20_03591 0.65 -2.2 3,779,678 - MPMX20_03591 0.66 -4.4 3,779,687 - MPMX20_03591 0.67 -0.8 3,779,689 + MPMX20_03591 0.68 -1.4 3,779,735 - MPMX20_03591 0.74 -4.1 3,779,750 + MPMX20_03591 0.75 -3.2 3,779,758 - MPMX20_03591 0.76 -3.3 3,779,758 - MPMX20_03591 0.76 -3.9 3,779,820 + MPMX20_03591 0.84 -3.0 3,779,854 - MPMX20_03591 0.89 -3.8 3,779,854 - MPMX20_03591 0.89 +0.2 3,779,854 - MPMX20_03591 0.89 -3.0 3,779,870 - -3.1 3,779,968 - -0.3 3,780,041 + MPMX20_03592 0.11 +0.9 3,780,041 + MPMX20_03592 0.11 -0.8 3,780,041 + MPMX20_03592 0.11 -0.4 3,780,041 + MPMX20_03592 0.11 +0.7 3,780,049 - MPMX20_03592 0.12 -0.8 3,780,049 - MPMX20_03592 0.12 +1.0
Or see this region's nucleotide sequence