Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02722

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02721 and MPMX20_02722 are separated by 462 nucleotidesMPMX20_02722 and MPMX20_02723 are separated by 47 nucleotidesMPMX20_02723 and MPMX20_02724 are separated by 12 nucleotides MPMX20_02721: MPMX20_02721 - hypothetical protein, at 2,875,254 to 2,876,813 _02721 MPMX20_02722: MPMX20_02722 - PTS system mannose-specific EIIAB component, at 2,877,276 to 2,878,238 _02722 MPMX20_02723: MPMX20_02723 - PTS system mannose-specific EIIC component, at 2,878,286 to 2,879,086 _02723 MPMX20_02724: MPMX20_02724 - PTS system mannose-specific EIID component, at 2,879,099 to 2,879,950 _02724 Position (kb) 2877 2878 2879Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2876.302 kb on - strand, within MPMX20_02721at 2876.307 kb on - strand, within MPMX20_02721at 2876.421 kb on + strand, within MPMX20_02721at 2876.541 kb on - strand, within MPMX20_02721at 2876.568 kb on + strand, within MPMX20_02721at 2876.603 kb on + strand, within MPMX20_02721at 2876.603 kb on + strand, within MPMX20_02721at 2876.626 kb on - strand, within MPMX20_02721at 2876.641 kb on + strand, within MPMX20_02721at 2876.649 kb on - strand, within MPMX20_02721at 2876.649 kb on - strand, within MPMX20_02721at 2876.659 kb on - strandat 2876.675 kb on - strandat 2876.758 kb on + strandat 2876.777 kb on + strandat 2876.845 kb on - strandat 2876.855 kb on - strandat 2876.973 kb on + strandat 2876.981 kb on + strandat 2876.981 kb on - strandat 2877.065 kb on - strandat 2877.093 kb on + strandat 2877.181 kb on + strandat 2877.234 kb on - strandat 2877.245 kb on - strandat 2877.273 kb on + strandat 2877.299 kb on - strandat 2877.313 kb on - strandat 2877.313 kb on - strandat 2877.318 kb on - strandat 2877.339 kb on - strandat 2877.342 kb on - strandat 2877.342 kb on - strandat 2877.416 kb on + strand, within MPMX20_02722at 2877.424 kb on - strand, within MPMX20_02722at 2877.432 kb on - strand, within MPMX20_02722at 2877.449 kb on + strand, within MPMX20_02722at 2877.570 kb on + strand, within MPMX20_02722at 2877.570 kb on + strand, within MPMX20_02722at 2877.577 kb on + strand, within MPMX20_02722at 2877.577 kb on + strand, within MPMX20_02722at 2877.585 kb on - strand, within MPMX20_02722at 2877.637 kb on - strand, within MPMX20_02722at 2877.725 kb on - strand, within MPMX20_02722at 2877.728 kb on + strand, within MPMX20_02722at 2877.759 kb on + strand, within MPMX20_02722at 2877.760 kb on + strand, within MPMX20_02722at 2877.797 kb on + strand, within MPMX20_02722at 2877.846 kb on - strand, within MPMX20_02722at 2877.848 kb on - strand, within MPMX20_02722at 2877.902 kb on - strand, within MPMX20_02722at 2877.933 kb on - strand, within MPMX20_02722at 2877.959 kb on - strand, within MPMX20_02722at 2877.987 kb on + strand, within MPMX20_02722at 2878.034 kb on - strand, within MPMX20_02722at 2878.066 kb on - strand, within MPMX20_02722at 2878.072 kb on - strand, within MPMX20_02722at 2878.082 kb on + strand, within MPMX20_02722at 2878.094 kb on + strand, within MPMX20_02722at 2878.126 kb on + strand, within MPMX20_02722at 2878.144 kb on + strandat 2878.159 kb on + strandat 2878.167 kb on - strandat 2878.167 kb on - strandat 2878.182 kb on - strandat 2878.281 kb on + strandat 2878.289 kb on - strandat 2878.299 kb on - strandat 2878.307 kb on - strandat 2878.310 kb on + strandat 2878.316 kb on + strandat 2878.318 kb on - strandat 2878.377 kb on + strand, within MPMX20_02723at 2878.382 kb on + strand, within MPMX20_02723at 2878.412 kb on - strand, within MPMX20_02723at 2878.446 kb on - strand, within MPMX20_02723at 2878.463 kb on + strand, within MPMX20_02723at 2878.471 kb on - strand, within MPMX20_02723at 2878.540 kb on - strand, within MPMX20_02723at 2878.540 kb on - strand, within MPMX20_02723at 2878.569 kb on + strand, within MPMX20_02723at 2878.569 kb on + strand, within MPMX20_02723at 2878.577 kb on - strand, within MPMX20_02723at 2878.599 kb on - strand, within MPMX20_02723at 2878.601 kb on + strand, within MPMX20_02723at 2878.610 kb on - strand, within MPMX20_02723at 2878.784 kb on + strand, within MPMX20_02723at 2878.784 kb on + strand, within MPMX20_02723at 2878.784 kb on + strand, within MPMX20_02723at 2878.787 kb on - strand, within MPMX20_02723at 2878.792 kb on - strand, within MPMX20_02723at 2878.792 kb on - strand, within MPMX20_02723at 2878.806 kb on + strand, within MPMX20_02723at 2878.826 kb on + strand, within MPMX20_02723at 2878.826 kb on + strand, within MPMX20_02723at 2878.826 kb on + strand, within MPMX20_02723at 2878.834 kb on - strand, within MPMX20_02723at 2878.968 kb on + strand, within MPMX20_02723at 2878.976 kb on + strand, within MPMX20_02723at 2879.002 kb on - strand, within MPMX20_02723at 2879.037 kb on + strandat 2879.037 kb on + strandat 2879.045 kb on - strandat 2879.045 kb on - strandat 2879.045 kb on - strandat 2879.045 kb on - strandat 2879.159 kb on + strandat 2879.169 kb on + strandat 2879.169 kb on + strandat 2879.177 kb on - strandat 2879.193 kb on - strand, within MPMX20_02724at 2879.212 kb on - strand, within MPMX20_02724

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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2,876,302 - MPMX20_02721 0.67 +0.9
2,876,307 - MPMX20_02721 0.68 -0.8
2,876,421 + MPMX20_02721 0.75 +0.0
2,876,541 - MPMX20_02721 0.82 -0.5
2,876,568 + MPMX20_02721 0.84 -1.8
2,876,603 + MPMX20_02721 0.86 +0.7
2,876,603 + MPMX20_02721 0.86 +1.2
2,876,626 - MPMX20_02721 0.88 -0.2
2,876,641 + MPMX20_02721 0.89 +0.6
2,876,649 - MPMX20_02721 0.89 -1.2
2,876,649 - MPMX20_02721 0.89 -1.8
2,876,659 - +0.2
2,876,675 - +0.0
2,876,758 + +0.2
2,876,777 + +0.9
2,876,845 - +1.0
2,876,855 - +0.2
2,876,973 + -0.6
2,876,981 + -2.3
2,876,981 - +0.6
2,877,065 - -0.1
2,877,093 + -2.2
2,877,181 + +0.5
2,877,234 - -1.8
2,877,245 - -0.1
2,877,273 + +1.2
2,877,299 - +0.3
2,877,313 - +0.8
2,877,313 - +0.7
2,877,318 - -0.1
2,877,339 - -0.7
2,877,342 - -0.2
2,877,342 - -0.4
2,877,416 + MPMX20_02722 0.15 +0.4
2,877,424 - MPMX20_02722 0.15 +0.2
2,877,432 - MPMX20_02722 0.16 +0.2
2,877,449 + MPMX20_02722 0.18 -0.1
2,877,570 + MPMX20_02722 0.31 -2.2
2,877,570 + MPMX20_02722 0.31 +0.3
2,877,577 + MPMX20_02722 0.31 +1.3
2,877,577 + MPMX20_02722 0.31 +0.8
2,877,585 - MPMX20_02722 0.32 -0.5
2,877,637 - MPMX20_02722 0.37 +0.6
2,877,725 - MPMX20_02722 0.47 -1.1
2,877,728 + MPMX20_02722 0.47 -0.0
2,877,759 + MPMX20_02722 0.50 +0.2
2,877,760 + MPMX20_02722 0.50 +1.2
2,877,797 + MPMX20_02722 0.54 -0.2
2,877,846 - MPMX20_02722 0.59 +1.4
2,877,848 - MPMX20_02722 0.59 +0.3
2,877,902 - MPMX20_02722 0.65 +0.5
2,877,933 - MPMX20_02722 0.68 -0.2
2,877,959 - MPMX20_02722 0.71 +1.0
2,877,987 + MPMX20_02722 0.74 -0.2
2,878,034 - MPMX20_02722 0.79 -0.6
2,878,066 - MPMX20_02722 0.82 +0.3
2,878,072 - MPMX20_02722 0.83 -0.5
2,878,082 + MPMX20_02722 0.84 +0.7
2,878,094 + MPMX20_02722 0.85 -0.2
2,878,126 + MPMX20_02722 0.88 -0.1
2,878,144 + -0.8
2,878,159 + -1.3
2,878,167 - -0.2
2,878,167 - +0.8
2,878,182 - +1.0
2,878,281 + +0.6
2,878,289 - -0.8
2,878,299 - -1.7
2,878,307 - -0.1
2,878,310 + +0.7
2,878,316 + -0.1
2,878,318 - -0.1
2,878,377 + MPMX20_02723 0.11 +0.3
2,878,382 + MPMX20_02723 0.12 +2.0
2,878,412 - MPMX20_02723 0.16 -0.0
2,878,446 - MPMX20_02723 0.20 +0.4
2,878,463 + MPMX20_02723 0.22 +0.2
2,878,471 - MPMX20_02723 0.23 +0.5
2,878,540 - MPMX20_02723 0.32 +0.0
2,878,540 - MPMX20_02723 0.32 +0.2
2,878,569 + MPMX20_02723 0.35 +0.6
2,878,569 + MPMX20_02723 0.35 +1.2
2,878,577 - MPMX20_02723 0.36 -0.8
2,878,599 - MPMX20_02723 0.39 +1.3
2,878,601 + MPMX20_02723 0.39 -1.0
2,878,610 - MPMX20_02723 0.40 -0.4
2,878,784 + MPMX20_02723 0.62 -3.8
2,878,784 + MPMX20_02723 0.62 -1.6
2,878,784 + MPMX20_02723 0.62 -0.7
2,878,787 - MPMX20_02723 0.63 +0.5
2,878,792 - MPMX20_02723 0.63 +1.2
2,878,792 - MPMX20_02723 0.63 -0.5
2,878,806 + MPMX20_02723 0.65 +0.1
2,878,826 + MPMX20_02723 0.67 -0.4
2,878,826 + MPMX20_02723 0.67 -0.6
2,878,826 + MPMX20_02723 0.67 -0.4
2,878,834 - MPMX20_02723 0.68 -0.1
2,878,968 + MPMX20_02723 0.85 +0.2
2,878,976 + MPMX20_02723 0.86 +1.0
2,879,002 - MPMX20_02723 0.89 -0.4
2,879,037 + +0.2
2,879,037 + -0.4
2,879,045 - +1.2
2,879,045 - -1.0
2,879,045 - -0.1
2,879,045 - +1.6
2,879,159 + -0.8
2,879,169 + +0.2
2,879,169 + +0.1
2,879,177 - +0.6
2,879,193 - MPMX20_02724 0.11 +1.0
2,879,212 - MPMX20_02724 0.13 +0.4

Or see this region's nucleotide sequence