Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02712

Experiment: Glycine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02711 and MPMX20_02712 are separated by 169 nucleotidesMPMX20_02712 and MPMX20_02713 are separated by 37 nucleotidesMPMX20_02713 and MPMX20_02714 are separated by 66 nucleotides MPMX20_02711: MPMX20_02711 - Long-chain-fatty-acid--CoA ligase, at 2,864,121 to 2,865,839 _02711 MPMX20_02712: MPMX20_02712 - Outer membrane protein Slp, at 2,866,009 to 2,866,590 _02712 MPMX20_02713: MPMX20_02713 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 2,866,628 to 2,867,323 _02713 MPMX20_02714: MPMX20_02714 - putative ATP-dependent DNA helicase YoaA, at 2,867,390 to 2,869,300 _02714 Position (kb) 2866 2867Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2865.096 kb on - strand, within MPMX20_02711at 2865.106 kb on - strand, within MPMX20_02711at 2865.117 kb on + strand, within MPMX20_02711at 2865.125 kb on + strand, within MPMX20_02711at 2865.147 kb on - strand, within MPMX20_02711at 2865.210 kb on + strand, within MPMX20_02711at 2865.218 kb on - strand, within MPMX20_02711at 2865.312 kb on + strand, within MPMX20_02711at 2865.318 kb on - strand, within MPMX20_02711at 2865.334 kb on + strand, within MPMX20_02711at 2865.506 kb on - strand, within MPMX20_02711at 2865.527 kb on - strand, within MPMX20_02711at 2865.544 kb on - strand, within MPMX20_02711at 2865.605 kb on - strand, within MPMX20_02711at 2865.639 kb on + strand, within MPMX20_02711at 2865.686 kb on - strandat 2865.692 kb on + strandat 2865.700 kb on - strandat 2865.705 kb on - strandat 2865.705 kb on - strandat 2865.746 kb on + strandat 2865.751 kb on + strandat 2865.751 kb on + strandat 2865.751 kb on + strandat 2865.751 kb on + strandat 2865.784 kb on + strandat 2865.786 kb on - strandat 2865.790 kb on + strandat 2865.790 kb on + strandat 2865.798 kb on - strandat 2865.814 kb on + strandat 2865.822 kb on - strandat 2865.822 kb on - strandat 2865.908 kb on + strandat 2866.040 kb on + strandat 2866.040 kb on + strandat 2866.040 kb on + strandat 2866.040 kb on + strandat 2866.040 kb on + strandat 2866.040 kb on + strandat 2866.043 kb on - strandat 2866.048 kb on - strandat 2866.094 kb on - strand, within MPMX20_02712at 2866.107 kb on - strand, within MPMX20_02712at 2866.223 kb on - strand, within MPMX20_02712at 2866.246 kb on + strand, within MPMX20_02712at 2866.254 kb on - strand, within MPMX20_02712at 2866.348 kb on - strand, within MPMX20_02712at 2866.390 kb on + strand, within MPMX20_02712at 2866.443 kb on + strand, within MPMX20_02712at 2866.451 kb on - strand, within MPMX20_02712at 2866.482 kb on + strand, within MPMX20_02712at 2866.533 kb on + strandat 2866.541 kb on - strandat 2866.541 kb on - strandat 2866.543 kb on - strandat 2866.564 kb on - strandat 2866.571 kb on + strandat 2866.571 kb on + strandat 2866.571 kb on + strandat 2866.579 kb on - strandat 2866.623 kb on - strandat 2867.489 kb on - strandat 2867.511 kb on + strandat 2867.546 kb on + strandat 2867.563 kb on - strandat 2867.563 kb on - strandat 2867.573 kb on + strandat 2867.574 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycine (C)
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2,865,096 - MPMX20_02711 0.57 -3.0
2,865,106 - MPMX20_02711 0.57 -0.3
2,865,117 + MPMX20_02711 0.58 -2.2
2,865,125 + MPMX20_02711 0.58 +1.0
2,865,147 - MPMX20_02711 0.60 -3.3
2,865,210 + MPMX20_02711 0.63 -1.8
2,865,218 - MPMX20_02711 0.64 -2.0
2,865,312 + MPMX20_02711 0.69 -2.2
2,865,318 - MPMX20_02711 0.70 +0.5
2,865,334 + MPMX20_02711 0.71 -1.7
2,865,506 - MPMX20_02711 0.81 -1.1
2,865,527 - MPMX20_02711 0.82 +0.3
2,865,544 - MPMX20_02711 0.83 -1.2
2,865,605 - MPMX20_02711 0.86 -0.5
2,865,639 + MPMX20_02711 0.88 -0.7
2,865,686 - -0.6
2,865,692 + -1.8
2,865,700 - -1.5
2,865,705 - +1.2
2,865,705 - -0.1
2,865,746 + -3.3
2,865,751 + -1.7
2,865,751 + +0.4
2,865,751 + -0.5
2,865,751 + -2.2
2,865,784 + -1.3
2,865,786 - +0.5
2,865,790 + -0.2
2,865,790 + -0.1
2,865,798 - +2.2
2,865,814 + +0.4
2,865,822 - +0.1
2,865,822 - -1.6
2,865,908 + +1.2
2,866,040 + +0.2
2,866,040 + -1.7
2,866,040 + -0.8
2,866,040 + +0.1
2,866,040 + +2.2
2,866,040 + +0.2
2,866,043 - +2.3
2,866,048 - -1.1
2,866,094 - MPMX20_02712 0.15 +0.6
2,866,107 - MPMX20_02712 0.17 -0.2
2,866,223 - MPMX20_02712 0.37 -1.8
2,866,246 + MPMX20_02712 0.41 -0.7
2,866,254 - MPMX20_02712 0.42 +0.5
2,866,348 - MPMX20_02712 0.58 -2.4
2,866,390 + MPMX20_02712 0.65 -1.1
2,866,443 + MPMX20_02712 0.75 -0.4
2,866,451 - MPMX20_02712 0.76 -1.0
2,866,482 + MPMX20_02712 0.81 +0.6
2,866,533 + +0.5
2,866,541 - -0.3
2,866,541 - -3.6
2,866,543 - +0.7
2,866,564 - +0.8
2,866,571 + -0.3
2,866,571 + -0.5
2,866,571 + +0.5
2,866,579 - -1.6
2,866,623 - -0.4
2,867,489 - -1.8
2,867,511 + -0.3
2,867,546 + +1.5
2,867,563 - +1.2
2,867,563 - +1.0
2,867,573 + -0.8
2,867,574 - +0.8

Or see this region's nucleotide sequence