Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00321

Experiment: Glycine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00319 and MPMX20_00320 overlap by 1 nucleotidesMPMX20_00320 and MPMX20_00321 overlap by 4 nucleotidesMPMX20_00321 and MPMX20_00322 are separated by 0 nucleotidesMPMX20_00322 and MPMX20_00323 are separated by 20 nucleotides MPMX20_00319: MPMX20_00319 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI, at 338,723 to 339,787 _00319 MPMX20_00320: MPMX20_00320 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH, at 339,787 to 340,371 _00320 MPMX20_00321: MPMX20_00321 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG, at 340,368 to 340,820 _00321 MPMX20_00322: MPMX20_00322 - putative transcriptional regulator PhnF, at 340,821 to 341,546 _00322 MPMX20_00323: MPMX20_00323 - Phosphate-import permease protein PhnE, at 341,567 to 342,346 _00323 Position (kb) 340 341Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 339.370 kb on - strand, within MPMX20_00319at 339.399 kb on - strand, within MPMX20_00319at 339.427 kb on - strand, within MPMX20_00319at 339.429 kb on + strand, within MPMX20_00319at 339.491 kb on + strand, within MPMX20_00319at 339.590 kb on - strand, within MPMX20_00319at 339.630 kb on - strand, within MPMX20_00319at 339.639 kb on + strand, within MPMX20_00319at 339.647 kb on - strand, within MPMX20_00319at 339.682 kb on + strandat 339.780 kb on + strandat 339.798 kb on + strandat 339.850 kb on - strand, within MPMX20_00320at 339.850 kb on - strand, within MPMX20_00320at 339.850 kb on - strand, within MPMX20_00320at 339.860 kb on - strand, within MPMX20_00320at 339.860 kb on - strand, within MPMX20_00320at 339.860 kb on - strand, within MPMX20_00320at 339.860 kb on - strand, within MPMX20_00320at 339.860 kb on - strand, within MPMX20_00320at 339.868 kb on + strand, within MPMX20_00320at 339.881 kb on + strand, within MPMX20_00320at 339.891 kb on + strand, within MPMX20_00320at 339.899 kb on - strand, within MPMX20_00320at 339.902 kb on + strand, within MPMX20_00320at 339.915 kb on + strand, within MPMX20_00320at 339.934 kb on - strand, within MPMX20_00320at 339.958 kb on - strand, within MPMX20_00320at 339.979 kb on + strand, within MPMX20_00320at 339.992 kb on - strand, within MPMX20_00320at 339.992 kb on - strand, within MPMX20_00320at 340.018 kb on - strand, within MPMX20_00320at 340.049 kb on + strand, within MPMX20_00320at 340.049 kb on + strand, within MPMX20_00320at 340.057 kb on - strand, within MPMX20_00320at 340.100 kb on + strand, within MPMX20_00320at 340.124 kb on + strand, within MPMX20_00320at 340.138 kb on + strand, within MPMX20_00320at 340.247 kb on + strand, within MPMX20_00320at 340.260 kb on - strand, within MPMX20_00320at 340.301 kb on + strand, within MPMX20_00320at 340.301 kb on + strand, within MPMX20_00320at 340.347 kb on + strandat 340.347 kb on + strandat 340.389 kb on - strandat 340.391 kb on + strandat 340.425 kb on + strand, within MPMX20_00321at 340.440 kb on + strand, within MPMX20_00321at 340.445 kb on + strand, within MPMX20_00321at 340.445 kb on + strand, within MPMX20_00321at 340.448 kb on - strand, within MPMX20_00321at 340.448 kb on - strand, within MPMX20_00321at 340.459 kb on + strand, within MPMX20_00321at 340.459 kb on + strand, within MPMX20_00321at 340.525 kb on + strand, within MPMX20_00321at 340.539 kb on + strand, within MPMX20_00321at 340.547 kb on - strand, within MPMX20_00321at 340.584 kb on - strand, within MPMX20_00321at 340.596 kb on + strand, within MPMX20_00321at 340.596 kb on + strand, within MPMX20_00321at 340.596 kb on + strand, within MPMX20_00321at 340.604 kb on - strand, within MPMX20_00321at 340.604 kb on - strand, within MPMX20_00321at 340.625 kb on - strand, within MPMX20_00321at 340.644 kb on + strand, within MPMX20_00321at 340.649 kb on + strand, within MPMX20_00321at 340.657 kb on - strand, within MPMX20_00321at 340.657 kb on - strand, within MPMX20_00321at 340.659 kb on + strand, within MPMX20_00321at 340.667 kb on - strand, within MPMX20_00321at 340.687 kb on - strand, within MPMX20_00321at 340.702 kb on + strand, within MPMX20_00321at 340.789 kb on - strandat 340.789 kb on - strandat 340.856 kb on + strandat 340.857 kb on + strandat 340.864 kb on - strandat 340.880 kb on - strandat 340.904 kb on + strand, within MPMX20_00322at 340.912 kb on - strand, within MPMX20_00322at 340.912 kb on - strand, within MPMX20_00322at 340.912 kb on - strand, within MPMX20_00322at 340.912 kb on - strand, within MPMX20_00322at 340.912 kb on - strand, within MPMX20_00322at 340.912 kb on - strand, within MPMX20_00322at 340.918 kb on + strand, within MPMX20_00322at 340.921 kb on - strand, within MPMX20_00322at 340.931 kb on - strand, within MPMX20_00322at 340.947 kb on + strand, within MPMX20_00322at 340.962 kb on + strand, within MPMX20_00322at 340.962 kb on + strand, within MPMX20_00322at 340.971 kb on - strand, within MPMX20_00322at 340.984 kb on + strand, within MPMX20_00322at 341.013 kb on - strand, within MPMX20_00322at 341.095 kb on + strand, within MPMX20_00322at 341.095 kb on + strand, within MPMX20_00322at 341.095 kb on + strand, within MPMX20_00322at 341.098 kb on + strand, within MPMX20_00322at 341.100 kb on + strand, within MPMX20_00322at 341.100 kb on + strand, within MPMX20_00322at 341.100 kb on + strand, within MPMX20_00322at 341.110 kb on + strand, within MPMX20_00322at 341.118 kb on - strand, within MPMX20_00322at 341.118 kb on - strand, within MPMX20_00322at 341.136 kb on - strand, within MPMX20_00322at 341.146 kb on + strand, within MPMX20_00322at 341.146 kb on + strand, within MPMX20_00322at 341.153 kb on + strand, within MPMX20_00322at 341.182 kb on - strand, within MPMX20_00322at 341.202 kb on + strand, within MPMX20_00322at 341.210 kb on - strand, within MPMX20_00322at 341.275 kb on - strand, within MPMX20_00322at 341.316 kb on + strand, within MPMX20_00322at 341.324 kb on - strand, within MPMX20_00322at 341.336 kb on + strand, within MPMX20_00322at 341.338 kb on + strand, within MPMX20_00322at 341.346 kb on + strand, within MPMX20_00322at 341.351 kb on + strand, within MPMX20_00322at 341.356 kb on + strand, within MPMX20_00322at 341.359 kb on - strand, within MPMX20_00322at 341.359 kb on - strand, within MPMX20_00322at 341.359 kb on - strand, within MPMX20_00322at 341.359 kb on - strand, within MPMX20_00322at 341.383 kb on - strand, within MPMX20_00322at 341.408 kb on + strand, within MPMX20_00322at 341.432 kb on + strand, within MPMX20_00322at 341.442 kb on + strand, within MPMX20_00322at 341.487 kb on - strandat 341.498 kb on + strandat 341.498 kb on + strandat 341.568 kb on + strandat 341.635 kb on + strandat 341.635 kb on + strandat 341.643 kb on - strandat 341.692 kb on + strand, within MPMX20_00323at 341.700 kb on - strand, within MPMX20_00323at 341.771 kb on - strand, within MPMX20_00323at 341.787 kb on + strand, within MPMX20_00323at 341.795 kb on - strand, within MPMX20_00323at 341.800 kb on - strand, within MPMX20_00323

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycine (C)
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339,370 - MPMX20_00319 0.61 +0.8
339,399 - MPMX20_00319 0.63 -2.4
339,427 - MPMX20_00319 0.66 +1.1
339,429 + MPMX20_00319 0.66 -0.1
339,491 + MPMX20_00319 0.72 -0.6
339,590 - MPMX20_00319 0.81 -0.3
339,630 - MPMX20_00319 0.85 -2.4
339,639 + MPMX20_00319 0.86 +1.0
339,647 - MPMX20_00319 0.87 -0.1
339,682 + +0.7
339,780 + -0.7
339,798 + +0.4
339,850 - MPMX20_00320 0.11 +1.5
339,850 - MPMX20_00320 0.11 +1.9
339,850 - MPMX20_00320 0.11 +0.4
339,860 - MPMX20_00320 0.12 +0.6
339,860 - MPMX20_00320 0.12 -3.0
339,860 - MPMX20_00320 0.12 -0.3
339,860 - MPMX20_00320 0.12 +0.9
339,860 - MPMX20_00320 0.12 -0.1
339,868 + MPMX20_00320 0.14 -0.2
339,881 + MPMX20_00320 0.16 +1.1
339,891 + MPMX20_00320 0.18 -3.1
339,899 - MPMX20_00320 0.19 -1.0
339,902 + MPMX20_00320 0.20 +1.6
339,915 + MPMX20_00320 0.22 -2.3
339,934 - MPMX20_00320 0.25 -0.5
339,958 - MPMX20_00320 0.29 +3.4
339,979 + MPMX20_00320 0.33 -0.3
339,992 - MPMX20_00320 0.35 +0.6
339,992 - MPMX20_00320 0.35 +0.0
340,018 - MPMX20_00320 0.39 +0.6
340,049 + MPMX20_00320 0.45 -0.0
340,049 + MPMX20_00320 0.45 -0.5
340,057 - MPMX20_00320 0.46 +0.5
340,100 + MPMX20_00320 0.54 +1.1
340,124 + MPMX20_00320 0.58 +1.1
340,138 + MPMX20_00320 0.60 +1.1
340,247 + MPMX20_00320 0.79 -2.9
340,260 - MPMX20_00320 0.81 +1.7
340,301 + MPMX20_00320 0.88 +0.0
340,301 + MPMX20_00320 0.88 -0.0
340,347 + -2.4
340,347 + -1.0
340,389 - -0.0
340,391 + +0.6
340,425 + MPMX20_00321 0.13 -3.0
340,440 + MPMX20_00321 0.16 +0.9
340,445 + MPMX20_00321 0.17 -1.0
340,445 + MPMX20_00321 0.17 -0.9
340,448 - MPMX20_00321 0.18 +1.4
340,448 - MPMX20_00321 0.18 +1.6
340,459 + MPMX20_00321 0.20 +2.0
340,459 + MPMX20_00321 0.20 +0.5
340,525 + MPMX20_00321 0.35 +0.6
340,539 + MPMX20_00321 0.38 -1.0
340,547 - MPMX20_00321 0.40 -0.3
340,584 - MPMX20_00321 0.48 -1.0
340,596 + MPMX20_00321 0.50 +0.6
340,596 + MPMX20_00321 0.50 +0.7
340,596 + MPMX20_00321 0.50 -1.5
340,604 - MPMX20_00321 0.52 -0.3
340,604 - MPMX20_00321 0.52 +1.3
340,625 - MPMX20_00321 0.57 +1.1
340,644 + MPMX20_00321 0.61 -3.2
340,649 + MPMX20_00321 0.62 +0.5
340,657 - MPMX20_00321 0.64 -2.8
340,657 - MPMX20_00321 0.64 -1.7
340,659 + MPMX20_00321 0.64 +0.1
340,667 - MPMX20_00321 0.66 +1.7
340,687 - MPMX20_00321 0.70 -3.0
340,702 + MPMX20_00321 0.74 -1.4
340,789 - +0.5
340,789 - -1.4
340,856 + -0.2
340,857 + -0.7
340,864 - +0.3
340,880 - +0.5
340,904 + MPMX20_00322 0.11 +0.7
340,912 - MPMX20_00322 0.13 -0.8
340,912 - MPMX20_00322 0.13 -0.4
340,912 - MPMX20_00322 0.13 -0.1
340,912 - MPMX20_00322 0.13 +0.4
340,912 - MPMX20_00322 0.13 +0.1
340,912 - MPMX20_00322 0.13 -2.0
340,918 + MPMX20_00322 0.13 -1.8
340,921 - MPMX20_00322 0.14 -3.6
340,931 - MPMX20_00322 0.15 -1.4
340,947 + MPMX20_00322 0.17 +0.5
340,962 + MPMX20_00322 0.19 +0.2
340,962 + MPMX20_00322 0.19 -2.5
340,971 - MPMX20_00322 0.21 -1.1
340,984 + MPMX20_00322 0.22 -2.2
341,013 - MPMX20_00322 0.26 -0.6
341,095 + MPMX20_00322 0.38 +0.3
341,095 + MPMX20_00322 0.38 -0.3
341,095 + MPMX20_00322 0.38 +2.3
341,098 + MPMX20_00322 0.38 +0.4
341,100 + MPMX20_00322 0.38 -1.2
341,100 + MPMX20_00322 0.38 +0.6
341,100 + MPMX20_00322 0.38 +2.2
341,110 + MPMX20_00322 0.40 -0.2
341,118 - MPMX20_00322 0.41 +0.6
341,118 - MPMX20_00322 0.41 -0.4
341,136 - MPMX20_00322 0.43 -0.8
341,146 + MPMX20_00322 0.45 -0.7
341,146 + MPMX20_00322 0.45 -0.7
341,153 + MPMX20_00322 0.46 +0.7
341,182 - MPMX20_00322 0.50 -0.3
341,202 + MPMX20_00322 0.52 +1.3
341,210 - MPMX20_00322 0.54 -0.4
341,275 - MPMX20_00322 0.63 -3.5
341,316 + MPMX20_00322 0.68 -1.0
341,324 - MPMX20_00322 0.69 +1.6
341,336 + MPMX20_00322 0.71 +1.5
341,338 + MPMX20_00322 0.71 +1.2
341,346 + MPMX20_00322 0.72 -1.7
341,351 + MPMX20_00322 0.73 -2.4
341,356 + MPMX20_00322 0.74 +1.2
341,359 - MPMX20_00322 0.74 +0.6
341,359 - MPMX20_00322 0.74 +1.4
341,359 - MPMX20_00322 0.74 -0.9
341,359 - MPMX20_00322 0.74 +0.9
341,383 - MPMX20_00322 0.77 +0.8
341,408 + MPMX20_00322 0.81 -0.6
341,432 + MPMX20_00322 0.84 -1.4
341,442 + MPMX20_00322 0.86 -0.4
341,487 - +1.4
341,498 + +0.4
341,498 + -2.1
341,568 + +0.7
341,635 + +0.3
341,635 + +2.3
341,643 - +0.1
341,692 + MPMX20_00323 0.16 +1.3
341,700 - MPMX20_00323 0.17 +1.2
341,771 - MPMX20_00323 0.26 -1.3
341,787 + MPMX20_00323 0.28 +1.2
341,795 - MPMX20_00323 0.29 +0.5
341,800 - MPMX20_00323 0.30 -0.3

Or see this region's nucleotide sequence