Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04333

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04332 and MPMX20_04333 overlap by 4 nucleotidesMPMX20_04333 and MPMX20_04334 are separated by 46 nucleotides MPMX20_04332: MPMX20_04332 - hypothetical protein, at 4,526,168 to 4,527,445 _04332 MPMX20_04333: MPMX20_04333 - High-affinity branched-chain amino acid transport system permease protein LivH, at 4,527,442 to 4,528,368 _04333 MPMX20_04334: MPMX20_04334 - Leucine-specific-binding protein, at 4,528,415 to 4,529,524 _04334 Position (kb) 4527 4528 4529Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4526.444 kb on - strand, within MPMX20_04332at 4526.449 kb on - strand, within MPMX20_04332at 4526.449 kb on - strand, within MPMX20_04332at 4526.532 kb on - strand, within MPMX20_04332at 4526.561 kb on + strand, within MPMX20_04332at 4526.590 kb on - strand, within MPMX20_04332at 4526.600 kb on - strand, within MPMX20_04332at 4526.610 kb on + strand, within MPMX20_04332at 4526.652 kb on - strand, within MPMX20_04332at 4526.736 kb on + strand, within MPMX20_04332at 4526.746 kb on - strand, within MPMX20_04332at 4526.776 kb on + strand, within MPMX20_04332at 4526.784 kb on - strand, within MPMX20_04332at 4526.803 kb on + strand, within MPMX20_04332at 4526.854 kb on - strand, within MPMX20_04332at 4526.854 kb on - strand, within MPMX20_04332at 4526.874 kb on - strand, within MPMX20_04332at 4526.990 kb on + strand, within MPMX20_04332at 4526.990 kb on + strand, within MPMX20_04332at 4526.991 kb on + strand, within MPMX20_04332at 4526.998 kb on - strand, within MPMX20_04332at 4526.998 kb on - strand, within MPMX20_04332at 4526.999 kb on - strand, within MPMX20_04332at 4527.018 kb on + strand, within MPMX20_04332at 4527.092 kb on + strand, within MPMX20_04332at 4527.097 kb on + strand, within MPMX20_04332at 4527.158 kb on - strand, within MPMX20_04332at 4527.158 kb on - strand, within MPMX20_04332at 4527.158 kb on - strand, within MPMX20_04332at 4527.197 kb on + strand, within MPMX20_04332at 4527.265 kb on - strand, within MPMX20_04332at 4527.281 kb on + strand, within MPMX20_04332at 4527.343 kb on + strandat 4527.351 kb on - strandat 4527.359 kb on - strandat 4527.406 kb on - strandat 4527.416 kb on - strandat 4527.456 kb on + strandat 4527.466 kb on + strandat 4527.474 kb on - strandat 4527.474 kb on - strandat 4527.474 kb on - strandat 4527.505 kb on + strandat 4527.527 kb on + strandat 4527.559 kb on - strand, within MPMX20_04333at 4527.630 kb on - strand, within MPMX20_04333at 4527.676 kb on - strand, within MPMX20_04333at 4527.710 kb on + strand, within MPMX20_04333at 4527.745 kb on + strand, within MPMX20_04333at 4527.745 kb on + strand, within MPMX20_04333at 4527.753 kb on - strand, within MPMX20_04333at 4527.753 kb on - strand, within MPMX20_04333at 4527.753 kb on - strand, within MPMX20_04333at 4527.793 kb on + strand, within MPMX20_04333at 4527.801 kb on - strand, within MPMX20_04333at 4527.885 kb on - strand, within MPMX20_04333at 4527.885 kb on - strand, within MPMX20_04333at 4527.961 kb on - strand, within MPMX20_04333at 4527.961 kb on - strand, within MPMX20_04333at 4527.961 kb on - strand, within MPMX20_04333at 4528.050 kb on - strand, within MPMX20_04333at 4528.233 kb on - strand, within MPMX20_04333at 4528.234 kb on - strand, within MPMX20_04333at 4528.247 kb on + strand, within MPMX20_04333at 4528.302 kb on + strandat 4528.325 kb on - strandat 4528.325 kb on - strandat 4528.325 kb on - strandat 4528.359 kb on + strandat 4528.359 kb on + strandat 4528.359 kb on + strandat 4528.377 kb on - strandat 4528.379 kb on + strandat 4528.527 kb on - strand, within MPMX20_04334at 4528.575 kb on + strand, within MPMX20_04334at 4528.593 kb on + strand, within MPMX20_04334at 4528.598 kb on - strand, within MPMX20_04334at 4528.664 kb on - strand, within MPMX20_04334at 4528.685 kb on - strand, within MPMX20_04334at 4528.691 kb on + strand, within MPMX20_04334at 4528.727 kb on + strand, within MPMX20_04334at 4528.727 kb on + strand, within MPMX20_04334at 4528.735 kb on - strand, within MPMX20_04334at 4528.735 kb on - strand, within MPMX20_04334at 4528.735 kb on - strand, within MPMX20_04334at 4528.828 kb on + strand, within MPMX20_04334at 4528.976 kb on + strand, within MPMX20_04334at 4528.976 kb on + strand, within MPMX20_04334at 4528.976 kb on + strand, within MPMX20_04334at 4528.976 kb on + strand, within MPMX20_04334at 4528.978 kb on + strand, within MPMX20_04334at 4528.984 kb on - strand, within MPMX20_04334at 4528.991 kb on + strand, within MPMX20_04334at 4528.991 kb on + strand, within MPMX20_04334at 4528.991 kb on + strand, within MPMX20_04334at 4528.991 kb on + strand, within MPMX20_04334at 4528.999 kb on - strand, within MPMX20_04334at 4529.026 kb on - strand, within MPMX20_04334at 4529.127 kb on - strand, within MPMX20_04334at 4529.127 kb on - strand, within MPMX20_04334at 4529.140 kb on + strand, within MPMX20_04334at 4529.140 kb on + strand, within MPMX20_04334at 4529.145 kb on + strand, within MPMX20_04334at 4529.148 kb on - strand, within MPMX20_04334at 4529.213 kb on - strand, within MPMX20_04334at 4529.217 kb on - strand, within MPMX20_04334

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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4,526,444 - MPMX20_04332 0.22 -0.4
4,526,449 - MPMX20_04332 0.22 -1.3
4,526,449 - MPMX20_04332 0.22 -0.7
4,526,532 - MPMX20_04332 0.28 -1.5
4,526,561 + MPMX20_04332 0.31 -1.0
4,526,590 - MPMX20_04332 0.33 -0.1
4,526,600 - MPMX20_04332 0.34 -3.8
4,526,610 + MPMX20_04332 0.35 -0.8
4,526,652 - MPMX20_04332 0.38 +0.2
4,526,736 + MPMX20_04332 0.44 +0.0
4,526,746 - MPMX20_04332 0.45 -1.9
4,526,776 + MPMX20_04332 0.48 -0.7
4,526,784 - MPMX20_04332 0.48 -0.6
4,526,803 + MPMX20_04332 0.50 +0.6
4,526,854 - MPMX20_04332 0.54 -1.2
4,526,854 - MPMX20_04332 0.54 -0.2
4,526,874 - MPMX20_04332 0.55 -0.5
4,526,990 + MPMX20_04332 0.64 -0.7
4,526,990 + MPMX20_04332 0.64 +0.1
4,526,991 + MPMX20_04332 0.64 +0.1
4,526,998 - MPMX20_04332 0.65 +0.1
4,526,998 - MPMX20_04332 0.65 -0.8
4,526,999 - MPMX20_04332 0.65 -1.0
4,527,018 + MPMX20_04332 0.67 -0.8
4,527,092 + MPMX20_04332 0.72 -0.2
4,527,097 + MPMX20_04332 0.73 -1.9
4,527,158 - MPMX20_04332 0.77 -1.7
4,527,158 - MPMX20_04332 0.77 -0.8
4,527,158 - MPMX20_04332 0.77 -0.2
4,527,197 + MPMX20_04332 0.81 +0.1
4,527,265 - MPMX20_04332 0.86 -1.8
4,527,281 + MPMX20_04332 0.87 +0.2
4,527,343 + -1.6
4,527,351 - +0.1
4,527,359 - -0.4
4,527,406 - -0.4
4,527,416 - -1.2
4,527,456 + -2.3
4,527,466 + +0.0
4,527,474 - -1.7
4,527,474 - -0.1
4,527,474 - -0.9
4,527,505 + +1.2
4,527,527 + -2.1
4,527,559 - MPMX20_04333 0.13 +1.3
4,527,630 - MPMX20_04333 0.20 +0.5
4,527,676 - MPMX20_04333 0.25 -0.6
4,527,710 + MPMX20_04333 0.29 -0.3
4,527,745 + MPMX20_04333 0.33 -2.4
4,527,745 + MPMX20_04333 0.33 -1.1
4,527,753 - MPMX20_04333 0.34 -0.7
4,527,753 - MPMX20_04333 0.34 -1.0
4,527,753 - MPMX20_04333 0.34 -0.7
4,527,793 + MPMX20_04333 0.38 +0.0
4,527,801 - MPMX20_04333 0.39 -0.3
4,527,885 - MPMX20_04333 0.48 -0.6
4,527,885 - MPMX20_04333 0.48 -1.1
4,527,961 - MPMX20_04333 0.56 -1.3
4,527,961 - MPMX20_04333 0.56 +0.6
4,527,961 - MPMX20_04333 0.56 -1.1
4,528,050 - MPMX20_04333 0.66 -0.5
4,528,233 - MPMX20_04333 0.85 -0.2
4,528,234 - MPMX20_04333 0.85 -2.0
4,528,247 + MPMX20_04333 0.87 +0.0
4,528,302 + -0.7
4,528,325 - -1.2
4,528,325 - -0.7
4,528,325 - -0.5
4,528,359 + -1.0
4,528,359 + -0.1
4,528,359 + +0.0
4,528,377 - -1.6
4,528,379 + -1.0
4,528,527 - MPMX20_04334 0.10 -0.7
4,528,575 + MPMX20_04334 0.14 -0.9
4,528,593 + MPMX20_04334 0.16 -1.8
4,528,598 - MPMX20_04334 0.16 -1.2
4,528,664 - MPMX20_04334 0.22 +0.2
4,528,685 - MPMX20_04334 0.24 +0.1
4,528,691 + MPMX20_04334 0.25 +0.0
4,528,727 + MPMX20_04334 0.28 -2.3
4,528,727 + MPMX20_04334 0.28 -0.9
4,528,735 - MPMX20_04334 0.29 -0.3
4,528,735 - MPMX20_04334 0.29 +0.6
4,528,735 - MPMX20_04334 0.29 -0.6
4,528,828 + MPMX20_04334 0.37 +0.1
4,528,976 + MPMX20_04334 0.51 -1.2
4,528,976 + MPMX20_04334 0.51 +0.7
4,528,976 + MPMX20_04334 0.51 +0.8
4,528,976 + MPMX20_04334 0.51 -0.4
4,528,978 + MPMX20_04334 0.51 +0.5
4,528,984 - MPMX20_04334 0.51 +0.0
4,528,991 + MPMX20_04334 0.52 -0.9
4,528,991 + MPMX20_04334 0.52 -1.8
4,528,991 + MPMX20_04334 0.52 +0.1
4,528,991 + MPMX20_04334 0.52 +2.0
4,528,999 - MPMX20_04334 0.53 -0.7
4,529,026 - MPMX20_04334 0.55 -1.0
4,529,127 - MPMX20_04334 0.64 +0.1
4,529,127 - MPMX20_04334 0.64 -2.0
4,529,140 + MPMX20_04334 0.65 -1.7
4,529,140 + MPMX20_04334 0.65 -2.3
4,529,145 + MPMX20_04334 0.66 -0.0
4,529,148 - MPMX20_04334 0.66 -0.3
4,529,213 - MPMX20_04334 0.72 +0.1
4,529,217 - MPMX20_04334 0.72 -0.8

Or see this region's nucleotide sequence