Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04316

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04315 and MPMX20_04316 are separated by 177 nucleotidesMPMX20_04316 and MPMX20_04317 are separated by 50 nucleotides MPMX20_04315: MPMX20_04315 - Aspartate-semialdehyde dehydrogenase, at 4,509,576 to 4,510,679 _04315 MPMX20_04316: MPMX20_04316 - hypothetical protein, at 4,510,857 to 4,511,450 _04316 MPMX20_04317: MPMX20_04317 - Low-affinity gluconate transporter, at 4,511,501 to 4,512,841 _04317 Position (kb) 4510 4511 4512Strain fitness (log2 ratio) -2 -1 0 1 2at 4510.705 kb on + strandat 4510.747 kb on - strandat 4510.838 kb on - strandat 4510.838 kb on - strandat 4510.873 kb on - strandat 4510.913 kb on - strandat 4510.940 kb on + strand, within MPMX20_04316at 4510.953 kb on + strand, within MPMX20_04316at 4510.961 kb on - strand, within MPMX20_04316at 4510.988 kb on + strand, within MPMX20_04316at 4511.055 kb on - strand, within MPMX20_04316at 4511.062 kb on + strand, within MPMX20_04316at 4511.086 kb on + strand, within MPMX20_04316at 4511.232 kb on - strand, within MPMX20_04316at 4511.323 kb on - strand, within MPMX20_04316at 4511.329 kb on - strand, within MPMX20_04316at 4511.406 kb on + strandat 4511.421 kb on + strandat 4511.438 kb on + strandat 4511.438 kb on + strandat 4511.504 kb on + strandat 4511.525 kb on + strandat 4511.623 kb on + strandat 4511.656 kb on + strand, within MPMX20_04317at 4511.664 kb on - strand, within MPMX20_04317at 4511.686 kb on - strand, within MPMX20_04317at 4511.701 kb on - strand, within MPMX20_04317at 4511.743 kb on - strand, within MPMX20_04317at 4511.743 kb on - strand, within MPMX20_04317at 4511.743 kb on - strand, within MPMX20_04317at 4511.774 kb on + strand, within MPMX20_04317at 4511.774 kb on + strand, within MPMX20_04317at 4511.782 kb on - strand, within MPMX20_04317at 4511.782 kb on - strand, within MPMX20_04317at 4511.782 kb on - strand, within MPMX20_04317at 4511.782 kb on - strand, within MPMX20_04317at 4511.801 kb on - strand, within MPMX20_04317at 4511.825 kb on + strand, within MPMX20_04317at 4511.825 kb on + strand, within MPMX20_04317at 4511.830 kb on + strand, within MPMX20_04317at 4511.830 kb on + strand, within MPMX20_04317at 4511.838 kb on - strand, within MPMX20_04317at 4511.838 kb on - strand, within MPMX20_04317at 4511.838 kb on - strand, within MPMX20_04317at 4511.838 kb on - strand, within MPMX20_04317at 4511.840 kb on + strand, within MPMX20_04317at 4511.847 kb on + strand, within MPMX20_04317at 4511.848 kb on - strand, within MPMX20_04317at 4511.858 kb on + strand, within MPMX20_04317at 4511.944 kb on + strand, within MPMX20_04317at 4512.013 kb on + strand, within MPMX20_04317at 4512.076 kb on + strand, within MPMX20_04317at 4512.084 kb on - strand, within MPMX20_04317at 4512.084 kb on - strand, within MPMX20_04317at 4512.156 kb on - strand, within MPMX20_04317at 4512.256 kb on - strand, within MPMX20_04317at 4512.282 kb on - strand, within MPMX20_04317at 4512.293 kb on - strand, within MPMX20_04317at 4512.352 kb on + strand, within MPMX20_04317at 4512.357 kb on + strand, within MPMX20_04317

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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4,510,705 + -0.8
4,510,747 - -0.5
4,510,838 - -1.5
4,510,838 - -1.2
4,510,873 - -0.8
4,510,913 - -0.2
4,510,940 + MPMX20_04316 0.14 -0.2
4,510,953 + MPMX20_04316 0.16 +0.2
4,510,961 - MPMX20_04316 0.18 +1.0
4,510,988 + MPMX20_04316 0.22 +0.2
4,511,055 - MPMX20_04316 0.33 -0.5
4,511,062 + MPMX20_04316 0.35 -0.8
4,511,086 + MPMX20_04316 0.39 +0.2
4,511,232 - MPMX20_04316 0.63 -0.1
4,511,323 - MPMX20_04316 0.78 -0.3
4,511,329 - MPMX20_04316 0.79 -1.1
4,511,406 + -0.4
4,511,421 + -0.9
4,511,438 + -0.6
4,511,438 + +0.3
4,511,504 + +1.1
4,511,525 + -0.7
4,511,623 + -0.7
4,511,656 + MPMX20_04317 0.12 +1.8
4,511,664 - MPMX20_04317 0.12 -0.3
4,511,686 - MPMX20_04317 0.14 -0.0
4,511,701 - MPMX20_04317 0.15 +0.1
4,511,743 - MPMX20_04317 0.18 +0.0
4,511,743 - MPMX20_04317 0.18 -2.5
4,511,743 - MPMX20_04317 0.18 -0.5
4,511,774 + MPMX20_04317 0.20 -0.3
4,511,774 + MPMX20_04317 0.20 +0.5
4,511,782 - MPMX20_04317 0.21 -0.7
4,511,782 - MPMX20_04317 0.21 +0.2
4,511,782 - MPMX20_04317 0.21 -0.6
4,511,782 - MPMX20_04317 0.21 +0.1
4,511,801 - MPMX20_04317 0.22 +0.4
4,511,825 + MPMX20_04317 0.24 +0.2
4,511,825 + MPMX20_04317 0.24 +0.1
4,511,830 + MPMX20_04317 0.25 +0.7
4,511,830 + MPMX20_04317 0.25 +0.2
4,511,838 - MPMX20_04317 0.25 +0.4
4,511,838 - MPMX20_04317 0.25 +0.5
4,511,838 - MPMX20_04317 0.25 +0.3
4,511,838 - MPMX20_04317 0.25 -0.0
4,511,840 + MPMX20_04317 0.25 -0.1
4,511,847 + MPMX20_04317 0.26 -1.0
4,511,848 - MPMX20_04317 0.26 +0.5
4,511,858 + MPMX20_04317 0.27 +1.3
4,511,944 + MPMX20_04317 0.33 -0.6
4,512,013 + MPMX20_04317 0.38 +0.0
4,512,076 + MPMX20_04317 0.43 -0.3
4,512,084 - MPMX20_04317 0.43 -0.2
4,512,084 - MPMX20_04317 0.43 +0.8
4,512,156 - MPMX20_04317 0.49 -0.5
4,512,256 - MPMX20_04317 0.56 +0.5
4,512,282 - MPMX20_04317 0.58 -0.6
4,512,293 - MPMX20_04317 0.59 -0.2
4,512,352 + MPMX20_04317 0.63 +0.3
4,512,357 + MPMX20_04317 0.64 -1.0

Or see this region's nucleotide sequence