Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03423 and MPMX20_03424 overlap by 4 nucleotides MPMX20_03424 and MPMX20_03425 are separated by 1 nucleotides
MPMX20_03423: MPMX20_03423 - Transcriptional regulatory protein QseF, at 3,607,948 to 3,609,285
_03423
MPMX20_03424: MPMX20_03424 - Quorum-sensing regulator protein G, at 3,609,282 to 3,610,031
_03424
MPMX20_03425: MPMX20_03425 - Sensor histidine kinase QseE, at 3,610,033 to 3,611,415
_03425
Position (kb)
3609
3610
3611 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3608.291 kb on + strand, within MPMX20_03423 at 3608.299 kb on - strand, within MPMX20_03423 at 3608.299 kb on - strand, within MPMX20_03423 at 3608.322 kb on - strand, within MPMX20_03423 at 3608.398 kb on + strand, within MPMX20_03423 at 3608.540 kb on + strand, within MPMX20_03423 at 3608.548 kb on - strand, within MPMX20_03423 at 3608.566 kb on - strand, within MPMX20_03423 at 3608.670 kb on + strand, within MPMX20_03423 at 3608.695 kb on - strand, within MPMX20_03423 at 3608.746 kb on + strand, within MPMX20_03423 at 3608.746 kb on + strand, within MPMX20_03423 at 3608.768 kb on - strand, within MPMX20_03423 at 3608.827 kb on + strand, within MPMX20_03423 at 3608.929 kb on + strand, within MPMX20_03423 at 3608.929 kb on + strand, within MPMX20_03423 at 3608.936 kb on + strand, within MPMX20_03423 at 3608.936 kb on + strand, within MPMX20_03423 at 3608.936 kb on + strand, within MPMX20_03423 at 3608.936 kb on + strand, within MPMX20_03423 at 3608.959 kb on - strand, within MPMX20_03423 at 3608.969 kb on + strand, within MPMX20_03423 at 3608.992 kb on - strand, within MPMX20_03423 at 3609.190 kb on + strand at 3609.195 kb on + strand at 3609.198 kb on - strand at 3609.234 kb on + strand at 3609.277 kb on - strand at 3609.296 kb on - strand at 3609.304 kb on - strand at 3609.346 kb on - strand at 3609.450 kb on + strand, within MPMX20_03424 at 3609.453 kb on - strand, within MPMX20_03424 at 3609.546 kb on + strand, within MPMX20_03424 at 3609.559 kb on + strand, within MPMX20_03424 at 3609.559 kb on + strand, within MPMX20_03424 at 3609.567 kb on - strand, within MPMX20_03424 at 3609.567 kb on - strand, within MPMX20_03424 at 3609.783 kb on - strand, within MPMX20_03424 at 3609.903 kb on + strand, within MPMX20_03424 at 3609.914 kb on + strand, within MPMX20_03424 at 3609.932 kb on + strand, within MPMX20_03424 at 3609.940 kb on - strand, within MPMX20_03424 at 3609.950 kb on - strand, within MPMX20_03424 at 3610.004 kb on + strand at 3610.012 kb on - strand at 3610.067 kb on - strand at 3610.067 kb on - strand at 3610.067 kb on - strand at 3610.067 kb on - strand at 3610.067 kb on - strand at 3610.072 kb on + strand at 3610.120 kb on - strand at 3610.144 kb on + strand at 3610.314 kb on + strand, within MPMX20_03425 at 3610.317 kb on + strand, within MPMX20_03425 at 3610.330 kb on - strand, within MPMX20_03425 at 3610.363 kb on + strand, within MPMX20_03425 at 3610.369 kb on - strand, within MPMX20_03425 at 3610.439 kb on + strand, within MPMX20_03425 at 3610.444 kb on + strand, within MPMX20_03425 at 3610.452 kb on - strand, within MPMX20_03425 at 3610.466 kb on + strand, within MPMX20_03425 at 3610.529 kb on + strand, within MPMX20_03425 at 3610.539 kb on - strand, within MPMX20_03425 at 3610.681 kb on - strand, within MPMX20_03425 at 3610.726 kb on - strand, within MPMX20_03425 at 3610.761 kb on + strand, within MPMX20_03425 at 3610.761 kb on + strand, within MPMX20_03425 at 3610.769 kb on - strand, within MPMX20_03425 at 3610.769 kb on - strand, within MPMX20_03425 at 3610.828 kb on - strand, within MPMX20_03425 at 3610.863 kb on + strand, within MPMX20_03425 at 3610.885 kb on - strand, within MPMX20_03425 at 3610.893 kb on - strand, within MPMX20_03425 at 3610.920 kb on - strand, within MPMX20_03425 at 3610.971 kb on + strand, within MPMX20_03425 at 3610.979 kb on - strand, within MPMX20_03425 at 3610.995 kb on - strand, within MPMX20_03425 at 3611.014 kb on - strand, within MPMX20_03425
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 3,608,291 + MPMX20_03423 0.26 +0.4 3,608,299 - MPMX20_03423 0.26 -0.2 3,608,299 - MPMX20_03423 0.26 -0.6 3,608,322 - MPMX20_03423 0.28 -0.8 3,608,398 + MPMX20_03423 0.34 -0.4 3,608,540 + MPMX20_03423 0.44 -0.2 3,608,548 - MPMX20_03423 0.45 -1.5 3,608,566 - MPMX20_03423 0.46 -0.4 3,608,670 + MPMX20_03423 0.54 -0.8 3,608,695 - MPMX20_03423 0.56 -1.4 3,608,746 + MPMX20_03423 0.60 -0.6 3,608,746 + MPMX20_03423 0.60 -0.1 3,608,768 - MPMX20_03423 0.61 -0.0 3,608,827 + MPMX20_03423 0.66 -0.6 3,608,929 + MPMX20_03423 0.73 -1.6 3,608,929 + MPMX20_03423 0.73 -0.4 3,608,936 + MPMX20_03423 0.74 +0.1 3,608,936 + MPMX20_03423 0.74 -0.1 3,608,936 + MPMX20_03423 0.74 -1.0 3,608,936 + MPMX20_03423 0.74 -0.9 3,608,959 - MPMX20_03423 0.76 -0.5 3,608,969 + MPMX20_03423 0.76 -0.0 3,608,992 - MPMX20_03423 0.78 +0.8 3,609,190 + +0.1 3,609,195 + -0.8 3,609,198 - -0.5 3,609,234 + -0.6 3,609,277 - +0.4 3,609,296 - -0.3 3,609,304 - +0.9 3,609,346 - -0.4 3,609,450 + MPMX20_03424 0.22 +0.7 3,609,453 - MPMX20_03424 0.23 -0.7 3,609,546 + MPMX20_03424 0.35 +0.6 3,609,559 + MPMX20_03424 0.37 -0.8 3,609,559 + MPMX20_03424 0.37 -0.2 3,609,567 - MPMX20_03424 0.38 -0.7 3,609,567 - MPMX20_03424 0.38 -0.1 3,609,783 - MPMX20_03424 0.67 -0.6 3,609,903 + MPMX20_03424 0.83 -1.1 3,609,914 + MPMX20_03424 0.84 -0.6 3,609,932 + MPMX20_03424 0.87 -0.6 3,609,940 - MPMX20_03424 0.88 -1.4 3,609,950 - MPMX20_03424 0.89 -0.5 3,610,004 + +0.2 3,610,012 - -1.3 3,610,067 - -0.2 3,610,067 - +0.2 3,610,067 - +2.4 3,610,067 - -0.5 3,610,067 - -0.1 3,610,072 + -0.9 3,610,120 - -1.3 3,610,144 + -0.6 3,610,314 + MPMX20_03425 0.20 -1.7 3,610,317 + MPMX20_03425 0.21 -0.3 3,610,330 - MPMX20_03425 0.21 +0.4 3,610,363 + MPMX20_03425 0.24 +0.6 3,610,369 - MPMX20_03425 0.24 +0.5 3,610,439 + MPMX20_03425 0.29 -0.5 3,610,444 + MPMX20_03425 0.30 -0.4 3,610,452 - MPMX20_03425 0.30 -1.6 3,610,466 + MPMX20_03425 0.31 +0.1 3,610,529 + MPMX20_03425 0.36 +0.0 3,610,539 - MPMX20_03425 0.37 -0.2 3,610,681 - MPMX20_03425 0.47 -0.1 3,610,726 - MPMX20_03425 0.50 -0.2 3,610,761 + MPMX20_03425 0.53 -0.6 3,610,761 + MPMX20_03425 0.53 -0.2 3,610,769 - MPMX20_03425 0.53 -0.4 3,610,769 - MPMX20_03425 0.53 -0.0 3,610,828 - MPMX20_03425 0.57 -1.2 3,610,863 + MPMX20_03425 0.60 -0.2 3,610,885 - MPMX20_03425 0.62 +1.0 3,610,893 - MPMX20_03425 0.62 -0.0 3,610,920 - MPMX20_03425 0.64 -1.6 3,610,971 + MPMX20_03425 0.68 -1.2 3,610,979 - MPMX20_03425 0.68 +0.7 3,610,995 - MPMX20_03425 0.70 -1.9 3,611,014 - MPMX20_03425 0.71 -2.3
Or see this region's nucleotide sequence