Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02734

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02730 and MPMX20_02731 are separated by 23 nucleotidesMPMX20_02731 and MPMX20_02732 are separated by 74 nucleotidesMPMX20_02732 and MPMX20_02733 are separated by 159 nucleotidesMPMX20_02733 and MPMX20_02734 are separated by 64 nucleotidesMPMX20_02734 and MPMX20_02735 are separated by 178 nucleotides MPMX20_02730: MPMX20_02730 - hypothetical protein, at 2,885,137 to 2,886,126 _02730 MPMX20_02731: MPMX20_02731 - hypothetical protein, at 2,886,150 to 2,886,440 _02731 MPMX20_02732: MPMX20_02732 - PhoP/PhoQ regulator MgrB, at 2,886,515 to 2,886,658 _02732 MPMX20_02733: MPMX20_02733 - hypothetical protein, at 2,886,818 to 2,887,057 _02733 MPMX20_02734: MPMX20_02734 - Transcriptional regulator KdgR, at 2,887,122 to 2,887,913 _02734 MPMX20_02735: MPMX20_02735 - Riboflavin transporter RibZ, at 2,888,092 to 2,889,465 _02735 Position (kb) 2887 2888Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2886.133 kb on + strandat 2886.190 kb on + strand, within MPMX20_02731at 2886.193 kb on - strand, within MPMX20_02731at 2886.252 kb on - strand, within MPMX20_02731at 2886.298 kb on + strand, within MPMX20_02731at 2886.298 kb on + strand, within MPMX20_02731at 2886.317 kb on + strand, within MPMX20_02731at 2886.416 kb on + strandat 2886.416 kb on + strandat 2886.416 kb on + strandat 2886.424 kb on - strandat 2886.438 kb on + strandat 2886.471 kb on + strandat 2886.591 kb on - strand, within MPMX20_02732at 2886.593 kb on - strand, within MPMX20_02732at 2886.604 kb on + strand, within MPMX20_02732at 2886.605 kb on - strand, within MPMX20_02732at 2886.612 kb on - strand, within MPMX20_02732at 2886.622 kb on - strand, within MPMX20_02732at 2886.642 kb on - strand, within MPMX20_02732at 2886.704 kb on + strandat 2886.712 kb on - strandat 2886.715 kb on + strandat 2886.726 kb on + strandat 2886.730 kb on - strandat 2886.730 kb on - strandat 2886.730 kb on - strandat 2886.757 kb on - strandat 2886.782 kb on + strandat 2886.782 kb on + strandat 2886.782 kb on + strandat 2886.790 kb on - strandat 2886.790 kb on - strandat 2886.790 kb on - strandat 2886.848 kb on - strand, within MPMX20_02733at 2886.863 kb on - strand, within MPMX20_02733at 2886.863 kb on - strand, within MPMX20_02733at 2886.869 kb on - strand, within MPMX20_02733at 2886.882 kb on + strand, within MPMX20_02733at 2886.890 kb on - strand, within MPMX20_02733at 2886.890 kb on - strand, within MPMX20_02733at 2886.955 kb on + strand, within MPMX20_02733at 2886.963 kb on - strand, within MPMX20_02733at 2886.963 kb on - strand, within MPMX20_02733at 2886.971 kb on + strand, within MPMX20_02733at 2887.014 kb on + strand, within MPMX20_02733at 2887.014 kb on + strand, within MPMX20_02733at 2887.022 kb on - strand, within MPMX20_02733at 2887.022 kb on - strand, within MPMX20_02733at 2887.027 kb on - strand, within MPMX20_02733at 2887.120 kb on + strandat 2887.128 kb on - strandat 2887.158 kb on + strandat 2887.171 kb on + strandat 2887.171 kb on + strandat 2887.194 kb on - strandat 2887.205 kb on - strand, within MPMX20_02734at 2887.259 kb on + strand, within MPMX20_02734at 2887.283 kb on + strand, within MPMX20_02734at 2887.291 kb on - strand, within MPMX20_02734at 2887.300 kb on + strand, within MPMX20_02734at 2887.301 kb on - strand, within MPMX20_02734at 2887.301 kb on - strand, within MPMX20_02734at 2887.306 kb on - strand, within MPMX20_02734at 2887.335 kb on - strand, within MPMX20_02734at 2887.387 kb on - strand, within MPMX20_02734at 2887.391 kb on + strand, within MPMX20_02734at 2887.396 kb on + strand, within MPMX20_02734at 2887.399 kb on - strand, within MPMX20_02734at 2887.399 kb on - strand, within MPMX20_02734at 2887.399 kb on - strand, within MPMX20_02734at 2887.410 kb on - strand, within MPMX20_02734at 2887.418 kb on - strand, within MPMX20_02734at 2887.436 kb on - strand, within MPMX20_02734at 2887.478 kb on + strand, within MPMX20_02734at 2887.492 kb on + strand, within MPMX20_02734at 2887.493 kb on + strand, within MPMX20_02734at 2887.501 kb on - strand, within MPMX20_02734at 2887.551 kb on + strand, within MPMX20_02734at 2887.559 kb on - strand, within MPMX20_02734at 2887.564 kb on - strand, within MPMX20_02734at 2887.569 kb on - strand, within MPMX20_02734at 2887.603 kb on - strand, within MPMX20_02734at 2887.607 kb on + strand, within MPMX20_02734at 2887.622 kb on - strand, within MPMX20_02734at 2887.631 kb on + strand, within MPMX20_02734at 2887.732 kb on + strand, within MPMX20_02734at 2887.732 kb on + strand, within MPMX20_02734at 2887.732 kb on + strand, within MPMX20_02734at 2887.740 kb on - strand, within MPMX20_02734at 2887.740 kb on - strand, within MPMX20_02734at 2887.745 kb on + strand, within MPMX20_02734at 2887.745 kb on + strand, within MPMX20_02734at 2887.808 kb on + strand, within MPMX20_02734at 2887.831 kb on + strand, within MPMX20_02734at 2887.851 kb on + strandat 2887.918 kb on - strandat 2888.127 kb on - strandat 2888.130 kb on + strandat 2888.130 kb on + strandat 2888.141 kb on - strandat 2888.184 kb on - strandat 2888.184 kb on - strandat 2888.184 kb on - strandat 2888.272 kb on - strand, within MPMX20_02735at 2888.353 kb on + strand, within MPMX20_02735at 2888.381 kb on + strand, within MPMX20_02735at 2888.457 kb on - strand, within MPMX20_02735at 2888.457 kb on - strand, within MPMX20_02735at 2888.457 kb on - strand, within MPMX20_02735at 2888.457 kb on - strand, within MPMX20_02735at 2888.470 kb on + strand, within MPMX20_02735at 2888.478 kb on - strand, within MPMX20_02735at 2888.558 kb on + strand, within MPMX20_02735at 2888.558 kb on + strand, within MPMX20_02735at 2888.558 kb on + strand, within MPMX20_02735at 2888.558 kb on + strand, within MPMX20_02735at 2888.583 kb on - strand, within MPMX20_02735at 2888.643 kb on + strand, within MPMX20_02735at 2888.696 kb on + strand, within MPMX20_02735at 2888.696 kb on + strand, within MPMX20_02735at 2888.704 kb on - strand, within MPMX20_02735at 2888.704 kb on - strand, within MPMX20_02735at 2888.704 kb on - strand, within MPMX20_02735at 2888.704 kb on - strand, within MPMX20_02735at 2888.704 kb on - strand, within MPMX20_02735at 2888.724 kb on - strand, within MPMX20_02735at 2888.733 kb on - strand, within MPMX20_02735at 2888.740 kb on - strand, within MPMX20_02735at 2888.740 kb on - strand, within MPMX20_02735at 2888.740 kb on - strand, within MPMX20_02735at 2888.740 kb on - strand, within MPMX20_02735at 2888.753 kb on - strand, within MPMX20_02735at 2888.762 kb on + strand, within MPMX20_02735at 2888.762 kb on + strand, within MPMX20_02735at 2888.770 kb on - strand, within MPMX20_02735at 2888.775 kb on - strand, within MPMX20_02735at 2888.780 kb on + strand, within MPMX20_02735at 2888.780 kb on + strand, within MPMX20_02735at 2888.780 kb on + strand, within MPMX20_02735at 2888.780 kb on + strand, within MPMX20_02735at 2888.780 kb on + strand, within MPMX20_02735at 2888.781 kb on - strand, within MPMX20_02735at 2888.788 kb on - strand, within MPMX20_02735at 2888.874 kb on + strand, within MPMX20_02735

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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2,886,133 + -0.1
2,886,190 + MPMX20_02731 0.14 +0.4
2,886,193 - MPMX20_02731 0.15 +0.1
2,886,252 - MPMX20_02731 0.35 +1.0
2,886,298 + MPMX20_02731 0.51 +0.7
2,886,298 + MPMX20_02731 0.51 +0.3
2,886,317 + MPMX20_02731 0.57 -1.7
2,886,416 + -1.3
2,886,416 + +0.2
2,886,416 + -0.5
2,886,424 - -3.2
2,886,438 + +1.7
2,886,471 + -0.6
2,886,591 - MPMX20_02732 0.53 +0.9
2,886,593 - MPMX20_02732 0.54 -0.4
2,886,604 + MPMX20_02732 0.62 -0.4
2,886,605 - MPMX20_02732 0.62 -0.4
2,886,612 - MPMX20_02732 0.67 -0.9
2,886,622 - MPMX20_02732 0.74 +0.1
2,886,642 - MPMX20_02732 0.88 -0.5
2,886,704 + +0.3
2,886,712 - -1.7
2,886,715 + -1.3
2,886,726 + +1.9
2,886,730 - -1.2
2,886,730 - -0.3
2,886,730 - -1.8
2,886,757 - +0.0
2,886,782 + -0.3
2,886,782 + +1.5
2,886,782 + +0.9
2,886,790 - -0.6
2,886,790 - -0.0
2,886,790 - -0.7
2,886,848 - MPMX20_02733 0.12 -0.5
2,886,863 - MPMX20_02733 0.19 -0.3
2,886,863 - MPMX20_02733 0.19 -0.2
2,886,869 - MPMX20_02733 0.21 -0.9
2,886,882 + MPMX20_02733 0.27 +1.1
2,886,890 - MPMX20_02733 0.30 -0.8
2,886,890 - MPMX20_02733 0.30 -0.8
2,886,955 + MPMX20_02733 0.57 +0.4
2,886,963 - MPMX20_02733 0.60 +0.5
2,886,963 - MPMX20_02733 0.60 -0.1
2,886,971 + MPMX20_02733 0.64 +0.1
2,887,014 + MPMX20_02733 0.82 +0.8
2,887,014 + MPMX20_02733 0.82 -0.9
2,887,022 - MPMX20_02733 0.85 -0.1
2,887,022 - MPMX20_02733 0.85 -0.7
2,887,027 - MPMX20_02733 0.87 -0.1
2,887,120 + +0.1
2,887,128 - -0.6
2,887,158 + -1.9
2,887,171 + -0.4
2,887,171 + -1.7
2,887,194 - -2.1
2,887,205 - MPMX20_02734 0.10 -1.8
2,887,259 + MPMX20_02734 0.17 -1.4
2,887,283 + MPMX20_02734 0.20 -1.6
2,887,291 - MPMX20_02734 0.21 +0.4
2,887,300 + MPMX20_02734 0.22 -1.0
2,887,301 - MPMX20_02734 0.23 -2.0
2,887,301 - MPMX20_02734 0.23 -2.3
2,887,306 - MPMX20_02734 0.23 -2.4
2,887,335 - MPMX20_02734 0.27 -2.6
2,887,387 - MPMX20_02734 0.33 -0.2
2,887,391 + MPMX20_02734 0.34 -1.4
2,887,396 + MPMX20_02734 0.35 -1.6
2,887,399 - MPMX20_02734 0.35 -0.6
2,887,399 - MPMX20_02734 0.35 +0.3
2,887,399 - MPMX20_02734 0.35 -1.9
2,887,410 - MPMX20_02734 0.36 -2.2
2,887,418 - MPMX20_02734 0.37 +0.3
2,887,436 - MPMX20_02734 0.40 -1.9
2,887,478 + MPMX20_02734 0.45 -1.1
2,887,492 + MPMX20_02734 0.47 -0.5
2,887,493 + MPMX20_02734 0.47 -1.0
2,887,501 - MPMX20_02734 0.48 -1.9
2,887,551 + MPMX20_02734 0.54 -2.1
2,887,559 - MPMX20_02734 0.55 +0.8
2,887,564 - MPMX20_02734 0.56 -1.3
2,887,569 - MPMX20_02734 0.56 -2.9
2,887,603 - MPMX20_02734 0.61 -1.7
2,887,607 + MPMX20_02734 0.61 -1.2
2,887,622 - MPMX20_02734 0.63 -1.9
2,887,631 + MPMX20_02734 0.64 -2.7
2,887,732 + MPMX20_02734 0.77 -1.7
2,887,732 + MPMX20_02734 0.77 +0.1
2,887,732 + MPMX20_02734 0.77 -2.3
2,887,740 - MPMX20_02734 0.78 -2.1
2,887,740 - MPMX20_02734 0.78 -2.4
2,887,745 + MPMX20_02734 0.79 -0.9
2,887,745 + MPMX20_02734 0.79 -1.3
2,887,808 + MPMX20_02734 0.87 -2.3
2,887,831 + MPMX20_02734 0.90 -2.8
2,887,851 + -2.0
2,887,918 - -1.2
2,888,127 - -0.6
2,888,130 + -0.7
2,888,130 + +0.4
2,888,141 - +0.6
2,888,184 - -0.9
2,888,184 - -0.7
2,888,184 - -0.1
2,888,272 - MPMX20_02735 0.13 -0.0
2,888,353 + MPMX20_02735 0.19 -0.5
2,888,381 + MPMX20_02735 0.21 -1.3
2,888,457 - MPMX20_02735 0.27 -1.9
2,888,457 - MPMX20_02735 0.27 +0.7
2,888,457 - MPMX20_02735 0.27 -0.4
2,888,457 - MPMX20_02735 0.27 +1.4
2,888,470 + MPMX20_02735 0.28 +0.8
2,888,478 - MPMX20_02735 0.28 -0.7
2,888,558 + MPMX20_02735 0.34 -2.4
2,888,558 + MPMX20_02735 0.34 +0.6
2,888,558 + MPMX20_02735 0.34 -0.2
2,888,558 + MPMX20_02735 0.34 +0.1
2,888,583 - MPMX20_02735 0.36 -1.2
2,888,643 + MPMX20_02735 0.40 -0.6
2,888,696 + MPMX20_02735 0.44 +0.3
2,888,696 + MPMX20_02735 0.44 +1.5
2,888,704 - MPMX20_02735 0.45 -2.9
2,888,704 - MPMX20_02735 0.45 +0.4
2,888,704 - MPMX20_02735 0.45 +0.1
2,888,704 - MPMX20_02735 0.45 +1.6
2,888,704 - MPMX20_02735 0.45 -1.4
2,888,724 - MPMX20_02735 0.46 +1.1
2,888,733 - MPMX20_02735 0.47 -0.4
2,888,740 - MPMX20_02735 0.47 +0.5
2,888,740 - MPMX20_02735 0.47 -1.0
2,888,740 - MPMX20_02735 0.47 -1.1
2,888,740 - MPMX20_02735 0.47 +0.4
2,888,753 - MPMX20_02735 0.48 +0.7
2,888,762 + MPMX20_02735 0.49 +0.5
2,888,762 + MPMX20_02735 0.49 -1.1
2,888,770 - MPMX20_02735 0.49 -0.1
2,888,775 - MPMX20_02735 0.50 -1.0
2,888,780 + MPMX20_02735 0.50 +0.3
2,888,780 + MPMX20_02735 0.50 -0.4
2,888,780 + MPMX20_02735 0.50 +0.2
2,888,780 + MPMX20_02735 0.50 +1.7
2,888,780 + MPMX20_02735 0.50 -0.2
2,888,781 - MPMX20_02735 0.50 +0.4
2,888,788 - MPMX20_02735 0.51 -0.4
2,888,874 + MPMX20_02735 0.57 +0.0

Or see this region's nucleotide sequence