Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04581

Experiment: L-Asparagine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04580 and MPMX20_04581 are separated by 28 nucleotidesMPMX20_04581 and MPMX20_04582 are separated by 44 nucleotidesMPMX20_04582 and MPMX20_04583 overlap by 4 nucleotides MPMX20_04580: MPMX20_04580 - Carboxylesterase NlhH, at 4,792,311 to 4,793,225 _04580 MPMX20_04581: MPMX20_04581 - hypothetical protein, at 4,793,254 to 4,794,195 _04581 MPMX20_04582: MPMX20_04582 - D-aminoacyl-tRNA deacylase, at 4,794,240 to 4,794,677 _04582 MPMX20_04583: MPMX20_04583 - hypothetical protein, at 4,794,674 to 4,795,555 _04583 Position (kb) 4793 4794 4795Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4792.364 kb on + strandat 4792.459 kb on - strand, within MPMX20_04580at 4792.472 kb on + strand, within MPMX20_04580at 4792.635 kb on + strand, within MPMX20_04580at 4792.640 kb on + strand, within MPMX20_04580at 4792.640 kb on + strand, within MPMX20_04580at 4792.648 kb on - strand, within MPMX20_04580at 4792.648 kb on - strand, within MPMX20_04580at 4792.648 kb on - strand, within MPMX20_04580at 4792.648 kb on - strand, within MPMX20_04580at 4792.653 kb on + strand, within MPMX20_04580at 4792.661 kb on + strand, within MPMX20_04580at 4792.669 kb on - strand, within MPMX20_04580at 4792.669 kb on - strand, within MPMX20_04580at 4792.669 kb on - strand, within MPMX20_04580at 4792.696 kb on + strand, within MPMX20_04580at 4792.709 kb on - strand, within MPMX20_04580at 4792.722 kb on + strand, within MPMX20_04580at 4792.737 kb on + strand, within MPMX20_04580at 4792.755 kb on - strand, within MPMX20_04580at 4792.757 kb on + strand, within MPMX20_04580at 4792.766 kb on - strand, within MPMX20_04580at 4792.805 kb on - strand, within MPMX20_04580at 4792.847 kb on + strand, within MPMX20_04580at 4792.860 kb on - strand, within MPMX20_04580at 4792.860 kb on - strand, within MPMX20_04580at 4792.893 kb on - strand, within MPMX20_04580at 4792.905 kb on + strand, within MPMX20_04580at 4792.929 kb on - strand, within MPMX20_04580at 4792.947 kb on - strand, within MPMX20_04580at 4793.038 kb on - strand, within MPMX20_04580at 4793.038 kb on - strand, within MPMX20_04580at 4793.067 kb on + strand, within MPMX20_04580at 4793.074 kb on + strand, within MPMX20_04580at 4793.123 kb on - strand, within MPMX20_04580at 4793.125 kb on + strand, within MPMX20_04580at 4793.133 kb on - strand, within MPMX20_04580at 4793.133 kb on - strand, within MPMX20_04580at 4793.134 kb on - strandat 4793.265 kb on + strandat 4793.277 kb on + strandat 4793.285 kb on - strandat 4793.390 kb on - strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.483 kb on - strand, within MPMX20_04581at 4793.536 kb on + strand, within MPMX20_04581at 4793.544 kb on - strand, within MPMX20_04581at 4793.554 kb on - strand, within MPMX20_04581at 4793.648 kb on + strand, within MPMX20_04581at 4793.648 kb on + strand, within MPMX20_04581at 4793.648 kb on + strand, within MPMX20_04581at 4793.655 kb on + strand, within MPMX20_04581at 4793.656 kb on - strand, within MPMX20_04581at 4793.656 kb on - strand, within MPMX20_04581at 4793.656 kb on - strand, within MPMX20_04581at 4793.658 kb on - strand, within MPMX20_04581at 4793.707 kb on - strand, within MPMX20_04581at 4793.707 kb on - strand, within MPMX20_04581at 4793.713 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.726 kb on - strand, within MPMX20_04581at 4793.726 kb on - strand, within MPMX20_04581at 4793.726 kb on - strand, within MPMX20_04581at 4793.726 kb on - strand, within MPMX20_04581at 4793.831 kb on - strand, within MPMX20_04581at 4793.860 kb on + strand, within MPMX20_04581at 4793.879 kb on + strand, within MPMX20_04581at 4793.885 kb on + strand, within MPMX20_04581at 4793.936 kb on + strand, within MPMX20_04581at 4793.938 kb on + strand, within MPMX20_04581at 4793.944 kb on - strand, within MPMX20_04581at 4793.945 kb on + strand, within MPMX20_04581at 4793.953 kb on - strand, within MPMX20_04581at 4793.953 kb on - strand, within MPMX20_04581at 4793.953 kb on - strand, within MPMX20_04581at 4793.983 kb on + strand, within MPMX20_04581at 4794.032 kb on + strand, within MPMX20_04581at 4794.034 kb on + strand, within MPMX20_04581at 4794.040 kb on - strand, within MPMX20_04581at 4794.110 kb on + strandat 4794.117 kb on - strandat 4794.197 kb on + strandat 4794.197 kb on + strandat 4794.197 kb on + strandat 4794.205 kb on - strandat 4794.217 kb on - strandat 4794.238 kb on + strandat 4794.296 kb on - strand, within MPMX20_04582at 4794.330 kb on - strand, within MPMX20_04582at 4794.373 kb on - strand, within MPMX20_04582at 4794.391 kb on + strand, within MPMX20_04582at 4794.391 kb on + strand, within MPMX20_04582at 4794.400 kb on - strand, within MPMX20_04582at 4794.450 kb on - strand, within MPMX20_04582at 4794.496 kb on - strand, within MPMX20_04582at 4794.541 kb on + strand, within MPMX20_04582at 4794.583 kb on + strand, within MPMX20_04582at 4794.583 kb on + strand, within MPMX20_04582at 4794.645 kb on + strandat 4794.662 kb on + strandat 4794.662 kb on + strandat 4794.779 kb on - strand, within MPMX20_04583at 4794.825 kb on - strand, within MPMX20_04583at 4794.828 kb on + strand, within MPMX20_04583at 4794.828 kb on + strand, within MPMX20_04583at 4794.836 kb on - strand, within MPMX20_04583at 4794.836 kb on - strand, within MPMX20_04583at 4794.846 kb on + strand, within MPMX20_04583at 4794.918 kb on + strand, within MPMX20_04583at 4794.955 kb on + strand, within MPMX20_04583at 4794.958 kb on - strand, within MPMX20_04583at 4794.960 kb on + strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.971 kb on - strand, within MPMX20_04583at 4795.011 kb on + strand, within MPMX20_04583at 4795.111 kb on + strand, within MPMX20_04583at 4795.111 kb on + strand, within MPMX20_04583at 4795.111 kb on + strand, within MPMX20_04583at 4795.119 kb on - strand, within MPMX20_04583at 4795.119 kb on - strand, within MPMX20_04583at 4795.119 kb on - strand, within MPMX20_04583at 4795.132 kb on + strand, within MPMX20_04583at 4795.147 kb on + strand, within MPMX20_04583at 4795.147 kb on - strand, within MPMX20_04583

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (C)
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4,792,364 + +0.7
4,792,459 - MPMX20_04580 0.16 -2.2
4,792,472 + MPMX20_04580 0.18 -0.0
4,792,635 + MPMX20_04580 0.35 +0.7
4,792,640 + MPMX20_04580 0.36 -0.3
4,792,640 + MPMX20_04580 0.36 -1.3
4,792,648 - MPMX20_04580 0.37 -1.1
4,792,648 - MPMX20_04580 0.37 +0.3
4,792,648 - MPMX20_04580 0.37 -0.7
4,792,648 - MPMX20_04580 0.37 +0.7
4,792,653 + MPMX20_04580 0.37 +0.4
4,792,661 + MPMX20_04580 0.38 +0.7
4,792,669 - MPMX20_04580 0.39 +0.2
4,792,669 - MPMX20_04580 0.39 -1.1
4,792,669 - MPMX20_04580 0.39 -1.1
4,792,696 + MPMX20_04580 0.42 +0.8
4,792,709 - MPMX20_04580 0.43 +0.6
4,792,722 + MPMX20_04580 0.45 +0.4
4,792,737 + MPMX20_04580 0.47 +1.7
4,792,755 - MPMX20_04580 0.49 -0.3
4,792,757 + MPMX20_04580 0.49 +0.0
4,792,766 - MPMX20_04580 0.50 -1.4
4,792,805 - MPMX20_04580 0.54 -0.8
4,792,847 + MPMX20_04580 0.59 +0.6
4,792,860 - MPMX20_04580 0.60 +0.1
4,792,860 - MPMX20_04580 0.60 +0.1
4,792,893 - MPMX20_04580 0.64 -1.5
4,792,905 + MPMX20_04580 0.65 +1.2
4,792,929 - MPMX20_04580 0.68 +1.9
4,792,947 - MPMX20_04580 0.70 -0.0
4,793,038 - MPMX20_04580 0.79 +1.4
4,793,038 - MPMX20_04580 0.79 +1.3
4,793,067 + MPMX20_04580 0.83 +0.1
4,793,074 + MPMX20_04580 0.83 +0.1
4,793,123 - MPMX20_04580 0.89 +0.6
4,793,125 + MPMX20_04580 0.89 -2.0
4,793,133 - MPMX20_04580 0.90 +0.9
4,793,133 - MPMX20_04580 0.90 -0.4
4,793,134 - +0.7
4,793,265 + +0.3
4,793,277 + +0.1
4,793,285 - +0.4
4,793,390 - MPMX20_04581 0.14 -0.7
4,793,448 + MPMX20_04581 0.21 -1.1
4,793,448 + MPMX20_04581 0.21 -2.7
4,793,448 + MPMX20_04581 0.21 -0.2
4,793,448 + MPMX20_04581 0.21 -1.9
4,793,448 + MPMX20_04581 0.21 -2.6
4,793,448 + MPMX20_04581 0.21 -1.8
4,793,448 + MPMX20_04581 0.21 -0.5
4,793,483 - MPMX20_04581 0.24 -1.8
4,793,536 + MPMX20_04581 0.30 +0.1
4,793,544 - MPMX20_04581 0.31 -2.4
4,793,554 - MPMX20_04581 0.32 -1.4
4,793,648 + MPMX20_04581 0.42 -2.1
4,793,648 + MPMX20_04581 0.42 -0.7
4,793,648 + MPMX20_04581 0.42 -0.4
4,793,655 + MPMX20_04581 0.43 +1.8
4,793,656 - MPMX20_04581 0.43 -4.0
4,793,656 - MPMX20_04581 0.43 -2.1
4,793,656 - MPMX20_04581 0.43 -0.9
4,793,658 - MPMX20_04581 0.43 -1.2
4,793,707 - MPMX20_04581 0.48 -0.5
4,793,707 - MPMX20_04581 0.48 +0.1
4,793,713 + MPMX20_04581 0.49 -1.3
4,793,718 + MPMX20_04581 0.49 +0.6
4,793,718 + MPMX20_04581 0.49 +0.2
4,793,718 + MPMX20_04581 0.49 -3.1
4,793,718 + MPMX20_04581 0.49 -2.7
4,793,718 + MPMX20_04581 0.49 -0.6
4,793,718 + MPMX20_04581 0.49 -1.0
4,793,726 - MPMX20_04581 0.50 -0.3
4,793,726 - MPMX20_04581 0.50 +0.1
4,793,726 - MPMX20_04581 0.50 -1.1
4,793,726 - MPMX20_04581 0.50 +1.0
4,793,831 - MPMX20_04581 0.61 +0.7
4,793,860 + MPMX20_04581 0.64 -1.1
4,793,879 + MPMX20_04581 0.66 -0.2
4,793,885 + MPMX20_04581 0.67 -3.5
4,793,936 + MPMX20_04581 0.72 -1.1
4,793,938 + MPMX20_04581 0.73 +0.0
4,793,944 - MPMX20_04581 0.73 -1.7
4,793,945 + MPMX20_04581 0.73 -0.9
4,793,953 - MPMX20_04581 0.74 -2.1
4,793,953 - MPMX20_04581 0.74 -2.2
4,793,953 - MPMX20_04581 0.74 +0.1
4,793,983 + MPMX20_04581 0.77 +0.6
4,794,032 + MPMX20_04581 0.83 -1.3
4,794,034 + MPMX20_04581 0.83 -0.9
4,794,040 - MPMX20_04581 0.83 -1.5
4,794,110 + -1.9
4,794,117 - -1.2
4,794,197 + -0.9
4,794,197 + +0.7
4,794,197 + +0.8
4,794,205 - -0.4
4,794,217 - -0.7
4,794,238 + -0.4
4,794,296 - MPMX20_04582 0.13 -0.5
4,794,330 - MPMX20_04582 0.21 +0.2
4,794,373 - MPMX20_04582 0.30 -0.8
4,794,391 + MPMX20_04582 0.34 -1.5
4,794,391 + MPMX20_04582 0.34 -0.1
4,794,400 - MPMX20_04582 0.37 +0.4
4,794,450 - MPMX20_04582 0.48 +0.4
4,794,496 - MPMX20_04582 0.58 +0.4
4,794,541 + MPMX20_04582 0.69 -1.2
4,794,583 + MPMX20_04582 0.78 +0.1
4,794,583 + MPMX20_04582 0.78 -1.8
4,794,645 + -0.3
4,794,662 + -2.3
4,794,662 + -2.6
4,794,779 - MPMX20_04583 0.12 +0.4
4,794,825 - MPMX20_04583 0.17 +1.2
4,794,828 + MPMX20_04583 0.17 -1.3
4,794,828 + MPMX20_04583 0.17 -0.4
4,794,836 - MPMX20_04583 0.18 +1.5
4,794,836 - MPMX20_04583 0.18 +0.5
4,794,846 + MPMX20_04583 0.20 -0.4
4,794,918 + MPMX20_04583 0.28 -1.1
4,794,955 + MPMX20_04583 0.32 +0.1
4,794,958 - MPMX20_04583 0.32 -0.3
4,794,960 + MPMX20_04583 0.32 +0.2
4,794,963 - MPMX20_04583 0.33 +1.8
4,794,963 - MPMX20_04583 0.33 +1.9
4,794,963 - MPMX20_04583 0.33 +0.7
4,794,963 - MPMX20_04583 0.33 +0.6
4,794,963 - MPMX20_04583 0.33 +2.1
4,794,963 - MPMX20_04583 0.33 +0.5
4,794,971 - MPMX20_04583 0.34 +2.2
4,795,011 + MPMX20_04583 0.38 -2.4
4,795,111 + MPMX20_04583 0.50 -0.3
4,795,111 + MPMX20_04583 0.50 +0.3
4,795,111 + MPMX20_04583 0.50 -0.7
4,795,119 - MPMX20_04583 0.50 +0.6
4,795,119 - MPMX20_04583 0.50 -0.4
4,795,119 - MPMX20_04583 0.50 +0.2
4,795,132 + MPMX20_04583 0.52 -0.3
4,795,147 + MPMX20_04583 0.54 -1.1
4,795,147 - MPMX20_04583 0.54 +0.2

Or see this region's nucleotide sequence