Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04435 and MPMX20_04436 are separated by 190 nucleotides MPMX20_04436 and MPMX20_04437 are separated by 9 nucleotides
MPMX20_04435: MPMX20_04435 - Xaa-Pro dipeptidase, at 4,636,458 to 4,637,789
_04435
MPMX20_04436: MPMX20_04436 - Fatty acid oxidation complex subunit alpha, at 4,637,980 to 4,640,169
_04436
MPMX20_04437: MPMX20_04437 - 3-ketoacyl-CoA thiolase, at 4,640,179 to 4,641,342
_04437
Position (kb)
4637
4638
4639
4640
4641 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4637.034 kb on + strand, within MPMX20_04435 at 4637.034 kb on + strand, within MPMX20_04435 at 4637.042 kb on - strand, within MPMX20_04435 at 4637.101 kb on + strand, within MPMX20_04435 at 4637.109 kb on - strand, within MPMX20_04435 at 4637.161 kb on + strand, within MPMX20_04435 at 4637.161 kb on + strand, within MPMX20_04435 at 4637.171 kb on + strand, within MPMX20_04435 at 4637.216 kb on + strand, within MPMX20_04435 at 4637.281 kb on - strand, within MPMX20_04435 at 4637.331 kb on + strand, within MPMX20_04435 at 4637.365 kb on + strand, within MPMX20_04435 at 4637.370 kb on + strand, within MPMX20_04435 at 4637.388 kb on + strand, within MPMX20_04435 at 4637.396 kb on - strand, within MPMX20_04435 at 4637.421 kb on - strand, within MPMX20_04435 at 4637.518 kb on - strand, within MPMX20_04435 at 4637.518 kb on - strand, within MPMX20_04435 at 4637.518 kb on - strand, within MPMX20_04435 at 4637.560 kb on - strand, within MPMX20_04435 at 4637.569 kb on - strand, within MPMX20_04435 at 4637.589 kb on + strand, within MPMX20_04435 at 4637.617 kb on + strand, within MPMX20_04435 at 4637.617 kb on - strand, within MPMX20_04435 at 4637.625 kb on - strand, within MPMX20_04435 at 4637.651 kb on - strand, within MPMX20_04435 at 4637.668 kb on + strand at 4637.668 kb on + strand at 4637.676 kb on - strand at 4637.676 kb on - strand at 4637.676 kb on - strand at 4637.676 kb on - strand at 4637.678 kb on + strand at 4637.686 kb on - strand at 4637.699 kb on - strand at 4637.821 kb on - strand at 4637.834 kb on - strand at 4637.834 kb on - strand at 4637.836 kb on - strand at 4637.845 kb on - strand at 4637.846 kb on - strand at 4637.849 kb on - strand at 4637.849 kb on - strand at 4637.971 kb on - strand at 4637.985 kb on + strand at 4637.999 kb on + strand at 4638.006 kb on + strand at 4638.014 kb on + strand at 4638.014 kb on - strand at 4638.039 kb on + strand at 4638.061 kb on + strand at 4638.092 kb on + strand at 4638.246 kb on - strand, within MPMX20_04436 at 4638.324 kb on - strand, within MPMX20_04436 at 4638.363 kb on + strand, within MPMX20_04436 at 4638.368 kb on + strand, within MPMX20_04436 at 4638.376 kb on - strand, within MPMX20_04436 at 4638.376 kb on - strand, within MPMX20_04436 at 4638.500 kb on + strand, within MPMX20_04436 at 4638.576 kb on - strand, within MPMX20_04436 at 4638.616 kb on + strand, within MPMX20_04436 at 4638.624 kb on - strand, within MPMX20_04436 at 4638.649 kb on - strand, within MPMX20_04436 at 4638.712 kb on + strand, within MPMX20_04436 at 4638.725 kb on - strand, within MPMX20_04436 at 4638.725 kb on - strand, within MPMX20_04436 at 4638.819 kb on + strand, within MPMX20_04436 at 4638.852 kb on - strand, within MPMX20_04436 at 4638.999 kb on + strand, within MPMX20_04436 at 4639.032 kb on + strand, within MPMX20_04436 at 4639.120 kb on + strand, within MPMX20_04436 at 4639.129 kb on + strand, within MPMX20_04436 at 4639.129 kb on + strand, within MPMX20_04436 at 4639.129 kb on + strand, within MPMX20_04436 at 4639.137 kb on - strand, within MPMX20_04436 at 4639.137 kb on - strand, within MPMX20_04436 at 4639.145 kb on + strand, within MPMX20_04436 at 4639.152 kb on - strand, within MPMX20_04436 at 4639.162 kb on - strand, within MPMX20_04436 at 4639.252 kb on + strand, within MPMX20_04436 at 4639.302 kb on - strand, within MPMX20_04436 at 4639.329 kb on - strand, within MPMX20_04436 at 4639.339 kb on - strand, within MPMX20_04436 at 4639.340 kb on - strand, within MPMX20_04436 at 4639.515 kb on + strand, within MPMX20_04436 at 4639.608 kb on + strand, within MPMX20_04436 at 4639.627 kb on + strand, within MPMX20_04436 at 4639.630 kb on - strand, within MPMX20_04436 at 4639.794 kb on - strand, within MPMX20_04436 at 4639.838 kb on - strand, within MPMX20_04436 at 4639.884 kb on + strand, within MPMX20_04436 at 4639.904 kb on + strand, within MPMX20_04436 at 4639.904 kb on + strand, within MPMX20_04436 at 4640.064 kb on + strand at 4640.088 kb on + strand at 4640.121 kb on - strand at 4640.123 kb on - strand at 4640.140 kb on + strand at 4640.277 kb on + strand at 4640.303 kb on + strand, within MPMX20_04437 at 4640.303 kb on - strand, within MPMX20_04437 at 4640.308 kb on + strand, within MPMX20_04437 at 4640.348 kb on + strand, within MPMX20_04437 at 4640.348 kb on + strand, within MPMX20_04437 at 4640.348 kb on + strand, within MPMX20_04437 at 4640.348 kb on + strand, within MPMX20_04437 at 4640.348 kb on + strand, within MPMX20_04437 at 4640.348 kb on + strand, within MPMX20_04437 at 4640.356 kb on - strand, within MPMX20_04437 at 4640.356 kb on - strand, within MPMX20_04437 at 4640.356 kb on - strand, within MPMX20_04437 at 4640.356 kb on - strand, within MPMX20_04437 at 4640.356 kb on - strand, within MPMX20_04437 at 4640.356 kb on - strand, within MPMX20_04437 at 4640.360 kb on + strand, within MPMX20_04437 at 4640.360 kb on + strand, within MPMX20_04437 at 4640.368 kb on - strand, within MPMX20_04437 at 4640.368 kb on - strand, within MPMX20_04437 at 4640.370 kb on + strand, within MPMX20_04437 at 4640.509 kb on - strand, within MPMX20_04437 at 4640.509 kb on - strand, within MPMX20_04437 at 4640.514 kb on - strand, within MPMX20_04437 at 4640.519 kb on - strand, within MPMX20_04437 at 4640.528 kb on + strand, within MPMX20_04437 at 4640.548 kb on + strand, within MPMX20_04437 at 4640.581 kb on + strand, within MPMX20_04437 at 4640.581 kb on + strand, within MPMX20_04437 at 4640.589 kb on - strand, within MPMX20_04437 at 4640.589 kb on - strand, within MPMX20_04437 at 4640.589 kb on - strand, within MPMX20_04437 at 4640.686 kb on - strand, within MPMX20_04437 at 4640.795 kb on - strand, within MPMX20_04437 at 4640.800 kb on + strand, within MPMX20_04437 at 4640.800 kb on + strand, within MPMX20_04437 at 4640.842 kb on - strand, within MPMX20_04437 at 4640.880 kb on + strand, within MPMX20_04437 at 4640.881 kb on - strand, within MPMX20_04437 at 4640.896 kb on + strand, within MPMX20_04437 at 4640.965 kb on - strand, within MPMX20_04437 at 4641.072 kb on - strand, within MPMX20_04437 at 4641.100 kb on + strand, within MPMX20_04437 at 4641.129 kb on - strand, within MPMX20_04437 at 4641.139 kb on + strand, within MPMX20_04437
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 4,637,034 + MPMX20_04435 0.43 -0.9 4,637,034 + MPMX20_04435 0.43 +0.5 4,637,042 - MPMX20_04435 0.44 +1.5 4,637,101 + MPMX20_04435 0.48 -1.2 4,637,109 - MPMX20_04435 0.49 -0.9 4,637,161 + MPMX20_04435 0.53 -0.4 4,637,161 + MPMX20_04435 0.53 +0.2 4,637,171 + MPMX20_04435 0.54 +0.8 4,637,216 + MPMX20_04435 0.57 +1.6 4,637,281 - MPMX20_04435 0.62 -0.7 4,637,331 + MPMX20_04435 0.66 -2.6 4,637,365 + MPMX20_04435 0.68 -0.5 4,637,370 + MPMX20_04435 0.68 +0.9 4,637,388 + MPMX20_04435 0.70 -1.2 4,637,396 - MPMX20_04435 0.70 +2.4 4,637,421 - MPMX20_04435 0.72 +0.7 4,637,518 - MPMX20_04435 0.80 -0.8 4,637,518 - MPMX20_04435 0.80 -2.8 4,637,518 - MPMX20_04435 0.80 +0.8 4,637,560 - MPMX20_04435 0.83 +0.1 4,637,569 - MPMX20_04435 0.83 +0.5 4,637,589 + MPMX20_04435 0.85 +1.6 4,637,617 + MPMX20_04435 0.87 -1.9 4,637,617 - MPMX20_04435 0.87 -0.2 4,637,625 - MPMX20_04435 0.88 +1.2 4,637,651 - MPMX20_04435 0.90 -0.2 4,637,668 + +0.2 4,637,668 + +0.5 4,637,676 - +0.1 4,637,676 - +0.3 4,637,676 - -0.3 4,637,676 - -1.1 4,637,678 + +1.3 4,637,686 - -0.3 4,637,699 - -1.0 4,637,821 - -1.5 4,637,834 - -1.0 4,637,834 - -1.1 4,637,836 - -0.5 4,637,845 - +1.0 4,637,846 - +0.9 4,637,849 - +0.1 4,637,849 - -0.7 4,637,971 - -0.7 4,637,985 + -0.7 4,637,999 + -1.0 4,638,006 + -1.7 4,638,014 + -1.4 4,638,014 - +1.4 4,638,039 + -1.2 4,638,061 + -0.2 4,638,092 + +0.5 4,638,246 - MPMX20_04436 0.12 -2.4 4,638,324 - MPMX20_04436 0.16 +0.7 4,638,363 + MPMX20_04436 0.17 -0.7 4,638,368 + MPMX20_04436 0.18 +0.7 4,638,376 - MPMX20_04436 0.18 -1.0 4,638,376 - MPMX20_04436 0.18 -0.5 4,638,500 + MPMX20_04436 0.24 -0.4 4,638,576 - MPMX20_04436 0.27 -1.2 4,638,616 + MPMX20_04436 0.29 -1.4 4,638,624 - MPMX20_04436 0.29 +0.1 4,638,649 - MPMX20_04436 0.31 -0.5 4,638,712 + MPMX20_04436 0.33 -0.9 4,638,725 - MPMX20_04436 0.34 -0.9 4,638,725 - MPMX20_04436 0.34 -0.5 4,638,819 + MPMX20_04436 0.38 -1.6 4,638,852 - MPMX20_04436 0.40 +0.4 4,638,999 + MPMX20_04436 0.47 -0.1 4,639,032 + MPMX20_04436 0.48 -2.8 4,639,120 + MPMX20_04436 0.52 +2.4 4,639,129 + MPMX20_04436 0.52 -0.9 4,639,129 + MPMX20_04436 0.52 -0.8 4,639,129 + MPMX20_04436 0.52 -2.2 4,639,137 - MPMX20_04436 0.53 -0.3 4,639,137 - MPMX20_04436 0.53 +0.5 4,639,145 + MPMX20_04436 0.53 -1.5 4,639,152 - MPMX20_04436 0.54 -1.6 4,639,162 - MPMX20_04436 0.54 -3.1 4,639,252 + MPMX20_04436 0.58 -1.2 4,639,302 - MPMX20_04436 0.60 -3.2 4,639,329 - MPMX20_04436 0.62 -2.0 4,639,339 - MPMX20_04436 0.62 -0.0 4,639,340 - MPMX20_04436 0.62 +0.4 4,639,515 + MPMX20_04436 0.70 -1.4 4,639,608 + MPMX20_04436 0.74 +0.0 4,639,627 + MPMX20_04436 0.75 -0.9 4,639,630 - MPMX20_04436 0.75 +0.3 4,639,794 - MPMX20_04436 0.83 -1.8 4,639,838 - MPMX20_04436 0.85 -3.0 4,639,884 + MPMX20_04436 0.87 -1.5 4,639,904 + MPMX20_04436 0.88 -1.0 4,639,904 + MPMX20_04436 0.88 -1.1 4,640,064 + -0.5 4,640,088 + +0.5 4,640,121 - +0.2 4,640,123 - -0.5 4,640,140 + -0.7 4,640,277 + -0.7 4,640,303 + MPMX20_04437 0.11 -2.2 4,640,303 - MPMX20_04437 0.11 -0.1 4,640,308 + MPMX20_04437 0.11 -1.2 4,640,348 + MPMX20_04437 0.15 -0.3 4,640,348 + MPMX20_04437 0.15 +1.8 4,640,348 + MPMX20_04437 0.15 -0.4 4,640,348 + MPMX20_04437 0.15 -0.8 4,640,348 + MPMX20_04437 0.15 -1.0 4,640,348 + MPMX20_04437 0.15 +1.3 4,640,356 - MPMX20_04437 0.15 -2.2 4,640,356 - MPMX20_04437 0.15 -1.1 4,640,356 - MPMX20_04437 0.15 -0.4 4,640,356 - MPMX20_04437 0.15 -0.2 4,640,356 - MPMX20_04437 0.15 -1.4 4,640,356 - MPMX20_04437 0.15 -1.5 4,640,360 + MPMX20_04437 0.16 +0.3 4,640,360 + MPMX20_04437 0.16 +0.1 4,640,368 - MPMX20_04437 0.16 +0.2 4,640,368 - MPMX20_04437 0.16 +0.1 4,640,370 + MPMX20_04437 0.16 +0.2 4,640,509 - MPMX20_04437 0.28 -1.1 4,640,509 - MPMX20_04437 0.28 +0.4 4,640,514 - MPMX20_04437 0.29 -1.7 4,640,519 - MPMX20_04437 0.29 -1.0 4,640,528 + MPMX20_04437 0.30 +1.0 4,640,548 + MPMX20_04437 0.32 -2.2 4,640,581 + MPMX20_04437 0.35 +0.5 4,640,581 + MPMX20_04437 0.35 -0.1 4,640,589 - MPMX20_04437 0.35 -1.0 4,640,589 - MPMX20_04437 0.35 -1.6 4,640,589 - MPMX20_04437 0.35 -0.2 4,640,686 - MPMX20_04437 0.44 +0.3 4,640,795 - MPMX20_04437 0.53 -2.2 4,640,800 + MPMX20_04437 0.53 +0.8 4,640,800 + MPMX20_04437 0.53 +0.6 4,640,842 - MPMX20_04437 0.57 +0.7 4,640,880 + MPMX20_04437 0.60 +1.1 4,640,881 - MPMX20_04437 0.60 -0.9 4,640,896 + MPMX20_04437 0.62 +0.8 4,640,965 - MPMX20_04437 0.68 +1.2 4,641,072 - MPMX20_04437 0.77 +1.1 4,641,100 + MPMX20_04437 0.79 -0.7 4,641,129 - MPMX20_04437 0.82 -0.9 4,641,139 + MPMX20_04437 0.82 +1.9
Or see this region's nucleotide sequence