Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04431 and MPMX20_04432 are separated by 356 nucleotides MPMX20_04432 and MPMX20_04433 are separated by 10 nucleotides MPMX20_04433 and MPMX20_04434 are separated by 41 nucleotides MPMX20_04434 and MPMX20_04435 overlap by 1 nucleotides
MPMX20_04431: MPMX20_04431 - 16S ribosomal RNA, at 4,631,903 to 4,633,438
_04431
MPMX20_04432: MPMX20_04432 - Protoporphyrinogen IX dehydrogenase [menaquinone], at 4,633,795 to 4,634,340
_04432
MPMX20_04433: MPMX20_04433 - Trk system potassium uptake protein TrkH, at 4,634,351 to 4,635,802
_04433
MPMX20_04434: MPMX20_04434 - IMPACT family member YigZ, at 4,635,844 to 4,636,458
_04434
MPMX20_04435: MPMX20_04435 - Xaa-Pro dipeptidase, at 4,636,458 to 4,637,789
_04435
Position (kb)
4634
4635
4636 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4634.347 kb on + strand at 4634.347 kb on + strand at 4634.365 kb on + strand at 4634.365 kb on + strand at 4634.378 kb on - strand at 4634.389 kb on + strand at 4634.396 kb on + strand at 4634.480 kb on + strand at 4634.480 kb on + strand at 4634.480 kb on + strand at 4634.485 kb on + strand at 4634.485 kb on + strand at 4634.493 kb on - strand at 4634.606 kb on + strand, within MPMX20_04433 at 4634.606 kb on + strand, within MPMX20_04433 at 4634.643 kb on + strand, within MPMX20_04433 at 4634.651 kb on - strand, within MPMX20_04433 at 4634.653 kb on + strand, within MPMX20_04433 at 4634.681 kb on + strand, within MPMX20_04433 at 4634.695 kb on + strand, within MPMX20_04433 at 4634.710 kb on + strand, within MPMX20_04433 at 4634.725 kb on + strand, within MPMX20_04433 at 4634.779 kb on + strand, within MPMX20_04433 at 4634.787 kb on - strand, within MPMX20_04433 at 4634.787 kb on - strand, within MPMX20_04433 at 4634.821 kb on + strand, within MPMX20_04433 at 4634.834 kb on - strand, within MPMX20_04433 at 4634.876 kb on - strand, within MPMX20_04433 at 4634.904 kb on + strand, within MPMX20_04433 at 4634.906 kb on + strand, within MPMX20_04433 at 4634.906 kb on + strand, within MPMX20_04433 at 4634.906 kb on + strand, within MPMX20_04433 at 4634.906 kb on + strand, within MPMX20_04433 at 4634.906 kb on + strand, within MPMX20_04433 at 4634.906 kb on + strand, within MPMX20_04433 at 4634.906 kb on + strand, within MPMX20_04433 at 4634.906 kb on + strand, within MPMX20_04433 at 4634.914 kb on - strand, within MPMX20_04433 at 4634.914 kb on - strand, within MPMX20_04433 at 4634.914 kb on - strand, within MPMX20_04433 at 4634.914 kb on - strand, within MPMX20_04433 at 4634.914 kb on - strand, within MPMX20_04433 at 4634.914 kb on - strand, within MPMX20_04433 at 4634.914 kb on - strand, within MPMX20_04433 at 4634.914 kb on - strand, within MPMX20_04433 at 4634.932 kb on + strand, within MPMX20_04433 at 4634.940 kb on - strand, within MPMX20_04433 at 4634.950 kb on - strand, within MPMX20_04433 at 4634.961 kb on - strand, within MPMX20_04433 at 4634.975 kb on - strand, within MPMX20_04433 at 4635.004 kb on + strand, within MPMX20_04433 at 4635.004 kb on + strand, within MPMX20_04433 at 4635.010 kb on + strand, within MPMX20_04433 at 4635.038 kb on - strand, within MPMX20_04433 at 4635.093 kb on - strand, within MPMX20_04433 at 4635.154 kb on + strand, within MPMX20_04433 at 4635.164 kb on + strand, within MPMX20_04433 at 4635.166 kb on + strand, within MPMX20_04433 at 4635.208 kb on - strand, within MPMX20_04433 at 4635.252 kb on - strand, within MPMX20_04433 at 4635.260 kb on - strand, within MPMX20_04433 at 4635.346 kb on + strand, within MPMX20_04433 at 4635.364 kb on + strand, within MPMX20_04433 at 4635.395 kb on - strand, within MPMX20_04433 at 4635.396 kb on - strand, within MPMX20_04433 at 4635.444 kb on + strand, within MPMX20_04433 at 4635.480 kb on + strand, within MPMX20_04433 at 4635.480 kb on + strand, within MPMX20_04433 at 4635.526 kb on + strand, within MPMX20_04433 at 4635.550 kb on + strand, within MPMX20_04433 at 4635.550 kb on + strand, within MPMX20_04433 at 4635.558 kb on + strand, within MPMX20_04433 at 4635.558 kb on + strand, within MPMX20_04433 at 4635.558 kb on + strand, within MPMX20_04433 at 4635.558 kb on - strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.560 kb on + strand, within MPMX20_04433 at 4635.566 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.568 kb on - strand, within MPMX20_04433 at 4635.570 kb on + strand, within MPMX20_04433 at 4635.570 kb on + strand, within MPMX20_04433 at 4635.570 kb on + strand, within MPMX20_04433 at 4635.570 kb on + strand, within MPMX20_04433 at 4635.570 kb on + strand, within MPMX20_04433 at 4635.570 kb on + strand, within MPMX20_04433 at 4635.570 kb on + strand, within MPMX20_04433 at 4635.570 kb on + strand, within MPMX20_04433 at 4635.570 kb on + strand, within MPMX20_04433 at 4635.573 kb on - strand, within MPMX20_04433 at 4635.578 kb on - strand, within MPMX20_04433 at 4635.578 kb on - strand, within MPMX20_04433 at 4635.578 kb on - strand, within MPMX20_04433 at 4635.578 kb on - strand, within MPMX20_04433 at 4635.578 kb on - strand, within MPMX20_04433 at 4635.578 kb on - strand, within MPMX20_04433 at 4635.578 kb on - strand, within MPMX20_04433 at 4635.578 kb on - strand, within MPMX20_04433 at 4635.592 kb on + strand, within MPMX20_04433 at 4635.641 kb on + strand, within MPMX20_04433 at 4635.641 kb on + strand, within MPMX20_04433 at 4635.646 kb on + strand, within MPMX20_04433 at 4635.654 kb on - strand, within MPMX20_04433 at 4635.654 kb on - strand, within MPMX20_04433 at 4635.682 kb on + strand at 4635.682 kb on + strand at 4635.727 kb on + strand at 4635.845 kb on - strand at 4635.980 kb on + strand, within MPMX20_04434 at 4635.980 kb on + strand, within MPMX20_04434 at 4635.988 kb on - strand, within MPMX20_04434 at 4635.988 kb on - strand, within MPMX20_04434 at 4635.988 kb on - strand, within MPMX20_04434 at 4636.041 kb on - strand, within MPMX20_04434 at 4636.075 kb on - strand, within MPMX20_04434 at 4636.113 kb on - strand, within MPMX20_04434 at 4636.120 kb on - strand, within MPMX20_04434 at 4636.120 kb on - strand, within MPMX20_04434 at 4636.120 kb on - strand, within MPMX20_04434 at 4636.174 kb on + strand, within MPMX20_04434 at 4636.263 kb on + strand, within MPMX20_04434 at 4636.263 kb on + strand, within MPMX20_04434 at 4636.303 kb on + strand, within MPMX20_04434 at 4636.359 kb on + strand, within MPMX20_04434 at 4636.373 kb on + strand, within MPMX20_04434 at 4636.402 kb on - strand at 4636.416 kb on + strand at 4636.466 kb on + strand at 4636.466 kb on + strand at 4636.569 kb on + strand at 4636.569 kb on + strand at 4636.575 kb on - strand at 4636.626 kb on + strand, within MPMX20_04435 at 4636.644 kb on + strand, within MPMX20_04435 at 4636.649 kb on + strand, within MPMX20_04435 at 4636.661 kb on + strand, within MPMX20_04435 at 4636.693 kb on - strand, within MPMX20_04435 at 4636.712 kb on + strand, within MPMX20_04435 at 4636.723 kb on + strand, within MPMX20_04435 at 4636.731 kb on - strand, within MPMX20_04435 at 4636.765 kb on - strand, within MPMX20_04435
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 4,634,347 + -0.5 4,634,347 + -2.8 4,634,365 + -1.4 4,634,365 + -2.0 4,634,378 - -0.4 4,634,389 + +0.2 4,634,396 + -2.6 4,634,480 + +0.3 4,634,480 + -1.7 4,634,480 + -3.6 4,634,485 + -2.4 4,634,485 + -1.4 4,634,493 - -2.9 4,634,606 + MPMX20_04433 0.18 -2.8 4,634,606 + MPMX20_04433 0.18 -0.6 4,634,643 + MPMX20_04433 0.20 -1.1 4,634,651 - MPMX20_04433 0.21 -3.5 4,634,653 + MPMX20_04433 0.21 -1.1 4,634,681 + MPMX20_04433 0.23 -1.4 4,634,695 + MPMX20_04433 0.24 -2.4 4,634,710 + MPMX20_04433 0.25 -0.2 4,634,725 + MPMX20_04433 0.26 -1.5 4,634,779 + MPMX20_04433 0.29 -1.7 4,634,787 - MPMX20_04433 0.30 -1.2 4,634,787 - MPMX20_04433 0.30 -0.9 4,634,821 + MPMX20_04433 0.32 -3.0 4,634,834 - MPMX20_04433 0.33 +1.0 4,634,876 - MPMX20_04433 0.36 -3.1 4,634,904 + MPMX20_04433 0.38 -0.9 4,634,906 + MPMX20_04433 0.38 -2.6 4,634,906 + MPMX20_04433 0.38 -2.7 4,634,906 + MPMX20_04433 0.38 -0.8 4,634,906 + MPMX20_04433 0.38 -1.6 4,634,906 + MPMX20_04433 0.38 -1.9 4,634,906 + MPMX20_04433 0.38 -0.4 4,634,906 + MPMX20_04433 0.38 -0.6 4,634,906 + MPMX20_04433 0.38 -2.3 4,634,914 - MPMX20_04433 0.39 -1.9 4,634,914 - MPMX20_04433 0.39 -2.9 4,634,914 - MPMX20_04433 0.39 -1.5 4,634,914 - MPMX20_04433 0.39 -1.3 4,634,914 - MPMX20_04433 0.39 -3.0 4,634,914 - MPMX20_04433 0.39 -1.7 4,634,914 - MPMX20_04433 0.39 -1.1 4,634,914 - MPMX20_04433 0.39 -0.8 4,634,932 + MPMX20_04433 0.40 -2.4 4,634,940 - MPMX20_04433 0.41 -0.7 4,634,950 - MPMX20_04433 0.41 -0.3 4,634,961 - MPMX20_04433 0.42 -1.4 4,634,975 - MPMX20_04433 0.43 -3.3 4,635,004 + MPMX20_04433 0.45 -1.7 4,635,004 + MPMX20_04433 0.45 -1.3 4,635,010 + MPMX20_04433 0.45 -3.7 4,635,038 - MPMX20_04433 0.47 -1.2 4,635,093 - MPMX20_04433 0.51 -0.4 4,635,154 + MPMX20_04433 0.55 +0.7 4,635,164 + MPMX20_04433 0.56 +0.4 4,635,166 + MPMX20_04433 0.56 +0.5 4,635,208 - MPMX20_04433 0.59 -1.7 4,635,252 - MPMX20_04433 0.62 -0.4 4,635,260 - MPMX20_04433 0.63 -1.4 4,635,346 + MPMX20_04433 0.69 -3.0 4,635,364 + MPMX20_04433 0.70 -2.1 4,635,395 - MPMX20_04433 0.72 +0.1 4,635,396 - MPMX20_04433 0.72 +1.7 4,635,444 + MPMX20_04433 0.75 -1.8 4,635,480 + MPMX20_04433 0.78 -0.2 4,635,480 + MPMX20_04433 0.78 -0.6 4,635,526 + MPMX20_04433 0.81 -0.5 4,635,550 + MPMX20_04433 0.83 -1.4 4,635,550 + MPMX20_04433 0.83 +0.2 4,635,558 + MPMX20_04433 0.83 -2.7 4,635,558 + MPMX20_04433 0.83 -1.8 4,635,558 + MPMX20_04433 0.83 -1.4 4,635,558 - MPMX20_04433 0.83 +0.1 4,635,560 + MPMX20_04433 0.83 -0.7 4,635,560 + MPMX20_04433 0.83 -2.9 4,635,560 + MPMX20_04433 0.83 -3.8 4,635,560 + MPMX20_04433 0.83 -0.6 4,635,560 + MPMX20_04433 0.83 -3.5 4,635,560 + MPMX20_04433 0.83 -2.0 4,635,560 + MPMX20_04433 0.83 -2.9 4,635,560 + MPMX20_04433 0.83 -1.3 4,635,560 + MPMX20_04433 0.83 -0.6 4,635,560 + MPMX20_04433 0.83 -2.2 4,635,560 + MPMX20_04433 0.83 -3.8 4,635,560 + MPMX20_04433 0.83 -2.0 4,635,560 + MPMX20_04433 0.83 -2.5 4,635,560 + MPMX20_04433 0.83 -1.7 4,635,566 - MPMX20_04433 0.84 -0.7 4,635,568 - MPMX20_04433 0.84 -3.7 4,635,568 - MPMX20_04433 0.84 -1.5 4,635,568 - MPMX20_04433 0.84 -1.4 4,635,568 - MPMX20_04433 0.84 -3.0 4,635,568 - MPMX20_04433 0.84 -1.7 4,635,568 - MPMX20_04433 0.84 -0.1 4,635,568 - MPMX20_04433 0.84 -1.6 4,635,568 - MPMX20_04433 0.84 -1.1 4,635,568 - MPMX20_04433 0.84 -1.2 4,635,568 - MPMX20_04433 0.84 -1.2 4,635,568 - MPMX20_04433 0.84 -3.1 4,635,568 - MPMX20_04433 0.84 -0.5 4,635,568 - MPMX20_04433 0.84 -1.9 4,635,570 + MPMX20_04433 0.84 +0.0 4,635,570 + MPMX20_04433 0.84 -0.7 4,635,570 + MPMX20_04433 0.84 -3.3 4,635,570 + MPMX20_04433 0.84 -2.4 4,635,570 + MPMX20_04433 0.84 +0.2 4,635,570 + MPMX20_04433 0.84 -3.6 4,635,570 + MPMX20_04433 0.84 -2.2 4,635,570 + MPMX20_04433 0.84 -1.1 4,635,570 + MPMX20_04433 0.84 -1.8 4,635,573 - MPMX20_04433 0.84 +0.5 4,635,578 - MPMX20_04433 0.85 -3.1 4,635,578 - MPMX20_04433 0.85 -2.3 4,635,578 - MPMX20_04433 0.85 -0.8 4,635,578 - MPMX20_04433 0.85 -0.9 4,635,578 - MPMX20_04433 0.85 -1.2 4,635,578 - MPMX20_04433 0.85 -0.9 4,635,578 - MPMX20_04433 0.85 -2.9 4,635,578 - MPMX20_04433 0.85 -0.1 4,635,592 + MPMX20_04433 0.85 -2.2 4,635,641 + MPMX20_04433 0.89 -1.0 4,635,641 + MPMX20_04433 0.89 -1.6 4,635,646 + MPMX20_04433 0.89 -3.3 4,635,654 - MPMX20_04433 0.90 -1.6 4,635,654 - MPMX20_04433 0.90 -1.1 4,635,682 + -0.5 4,635,682 + -0.9 4,635,727 + -2.5 4,635,845 - +0.4 4,635,980 + MPMX20_04434 0.22 +0.5 4,635,980 + MPMX20_04434 0.22 -0.8 4,635,988 - MPMX20_04434 0.23 +1.0 4,635,988 - MPMX20_04434 0.23 +0.3 4,635,988 - MPMX20_04434 0.23 +0.5 4,636,041 - MPMX20_04434 0.32 -0.6 4,636,075 - MPMX20_04434 0.38 +0.6 4,636,113 - MPMX20_04434 0.44 +0.7 4,636,120 - MPMX20_04434 0.45 -0.1 4,636,120 - MPMX20_04434 0.45 +0.7 4,636,120 - MPMX20_04434 0.45 +0.8 4,636,174 + MPMX20_04434 0.54 +0.2 4,636,263 + MPMX20_04434 0.68 -0.2 4,636,263 + MPMX20_04434 0.68 +0.4 4,636,303 + MPMX20_04434 0.75 +1.7 4,636,359 + MPMX20_04434 0.84 +0.2 4,636,373 + MPMX20_04434 0.86 -0.4 4,636,402 - +0.3 4,636,416 + -1.8 4,636,466 + +0.5 4,636,466 + +0.3 4,636,569 + -0.8 4,636,569 + +0.1 4,636,575 - +0.1 4,636,626 + MPMX20_04435 0.13 +0.4 4,636,644 + MPMX20_04435 0.14 -2.8 4,636,649 + MPMX20_04435 0.14 +0.7 4,636,661 + MPMX20_04435 0.15 -0.9 4,636,693 - MPMX20_04435 0.18 -1.6 4,636,712 + MPMX20_04435 0.19 +0.8 4,636,723 + MPMX20_04435 0.20 +1.9 4,636,731 - MPMX20_04435 0.20 -0.1 4,636,765 - MPMX20_04435 0.23 -0.9
Or see this region's nucleotide sequence