Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03525

Experiment: L-Asparagine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03524 and MPMX20_03525 overlap by 20 nucleotidesMPMX20_03525 and MPMX20_03526 are separated by 171 nucleotidesMPMX20_03526 and MPMX20_03527 overlap by 29 nucleotides MPMX20_03524: MPMX20_03524 - Vitamin B12 import ATP-binding protein BtuD, at 3,719,372 to 3,721,570 _03524 MPMX20_03525: MPMX20_03525 - Type I secretion system membrane fusion protein PrsE, at 3,721,551 to 3,722,750 _03525 MPMX20_03526: MPMX20_03526 - Nucleoside triphosphatase NudI, at 3,722,922 to 3,723,347 _03526 MPMX20_03527: MPMX20_03527 - HTH-type transcriptional regulator NimR, at 3,723,319 to 3,724,077 _03527 Position (kb) 3721 3722 3723Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 3720.571 kb on + strand, within MPMX20_03524at 3720.571 kb on + strand, within MPMX20_03524at 3720.575 kb on - strand, within MPMX20_03524at 3720.579 kb on - strand, within MPMX20_03524at 3720.579 kb on - strand, within MPMX20_03524at 3720.689 kb on - strand, within MPMX20_03524at 3720.704 kb on - strand, within MPMX20_03524at 3720.718 kb on + strand, within MPMX20_03524at 3720.747 kb on + strand, within MPMX20_03524at 3720.747 kb on + strand, within MPMX20_03524at 3720.747 kb on + strand, within MPMX20_03524at 3720.747 kb on + strand, within MPMX20_03524at 3720.755 kb on - strand, within MPMX20_03524at 3720.755 kb on - strand, within MPMX20_03524at 3720.803 kb on + strand, within MPMX20_03524at 3720.813 kb on + strand, within MPMX20_03524at 3720.844 kb on - strand, within MPMX20_03524at 3720.869 kb on + strand, within MPMX20_03524at 3720.869 kb on + strand, within MPMX20_03524at 3720.877 kb on - strand, within MPMX20_03524at 3720.877 kb on - strand, within MPMX20_03524at 3720.900 kb on - strand, within MPMX20_03524at 3721.032 kb on - strand, within MPMX20_03524at 3721.032 kb on - strand, within MPMX20_03524at 3721.094 kb on - strand, within MPMX20_03524at 3721.117 kb on - strand, within MPMX20_03524at 3721.198 kb on + strand, within MPMX20_03524at 3721.199 kb on + strand, within MPMX20_03524at 3721.199 kb on + strand, within MPMX20_03524at 3721.199 kb on + strand, within MPMX20_03524at 3721.207 kb on - strand, within MPMX20_03524at 3721.207 kb on - strand, within MPMX20_03524at 3721.207 kb on - strand, within MPMX20_03524at 3721.207 kb on - strand, within MPMX20_03524at 3721.207 kb on - strand, within MPMX20_03524at 3721.207 kb on - strand, within MPMX20_03524at 3721.225 kb on - strand, within MPMX20_03524at 3721.232 kb on + strand, within MPMX20_03524at 3721.240 kb on - strand, within MPMX20_03524at 3721.293 kb on + strand, within MPMX20_03524at 3721.293 kb on + strand, within MPMX20_03524at 3721.296 kb on - strand, within MPMX20_03524at 3721.366 kb on + strandat 3721.388 kb on - strandat 3721.530 kb on - strandat 3721.721 kb on + strand, within MPMX20_03525at 3721.779 kb on - strand, within MPMX20_03525at 3721.817 kb on + strand, within MPMX20_03525at 3721.846 kb on - strand, within MPMX20_03525at 3721.888 kb on + strand, within MPMX20_03525at 3721.909 kb on + strand, within MPMX20_03525at 3721.909 kb on - strand, within MPMX20_03525at 3722.015 kb on - strand, within MPMX20_03525at 3722.024 kb on + strand, within MPMX20_03525at 3722.032 kb on + strand, within MPMX20_03525at 3722.032 kb on - strand, within MPMX20_03525at 3722.055 kb on + strand, within MPMX20_03525at 3722.063 kb on - strand, within MPMX20_03525at 3722.131 kb on - strand, within MPMX20_03525at 3722.187 kb on + strand, within MPMX20_03525at 3722.199 kb on + strand, within MPMX20_03525at 3722.205 kb on - strand, within MPMX20_03525at 3722.214 kb on + strand, within MPMX20_03525at 3722.375 kb on + strand, within MPMX20_03525at 3722.383 kb on - strand, within MPMX20_03525at 3722.447 kb on - strand, within MPMX20_03525at 3722.481 kb on + strand, within MPMX20_03525at 3722.528 kb on - strand, within MPMX20_03525at 3722.535 kb on - strand, within MPMX20_03525at 3722.544 kb on + strand, within MPMX20_03525at 3722.544 kb on + strand, within MPMX20_03525at 3722.544 kb on + strand, within MPMX20_03525at 3722.544 kb on + strand, within MPMX20_03525at 3722.568 kb on - strand, within MPMX20_03525at 3722.598 kb on + strand, within MPMX20_03525at 3722.598 kb on + strand, within MPMX20_03525at 3722.598 kb on + strand, within MPMX20_03525at 3722.603 kb on + strand, within MPMX20_03525at 3722.603 kb on + strand, within MPMX20_03525at 3722.606 kb on - strand, within MPMX20_03525at 3722.611 kb on - strand, within MPMX20_03525at 3722.623 kb on - strand, within MPMX20_03525at 3722.641 kb on - strandat 3722.641 kb on - strandat 3722.669 kb on + strandat 3722.677 kb on - strandat 3722.677 kb on - strandat 3722.696 kb on + strandat 3722.722 kb on - strandat 3722.752 kb on - strandat 3722.757 kb on - strandat 3722.790 kb on - strandat 3722.800 kb on - strandat 3722.801 kb on - strandat 3722.820 kb on + strandat 3722.830 kb on + strandat 3722.830 kb on + strandat 3722.830 kb on + strandat 3722.838 kb on - strandat 3722.858 kb on + strandat 3722.866 kb on - strandat 3723.037 kb on + strand, within MPMX20_03526at 3723.045 kb on - strand, within MPMX20_03526at 3723.098 kb on - strand, within MPMX20_03526at 3723.098 kb on - strand, within MPMX20_03526at 3723.105 kb on + strand, within MPMX20_03526at 3723.119 kb on + strand, within MPMX20_03526at 3723.120 kb on + strand, within MPMX20_03526at 3723.125 kb on + strand, within MPMX20_03526at 3723.128 kb on - strand, within MPMX20_03526at 3723.214 kb on + strand, within MPMX20_03526at 3723.258 kb on - strand, within MPMX20_03526at 3723.282 kb on - strand, within MPMX20_03526at 3723.305 kb on - strandat 3723.309 kb on + strandat 3723.419 kb on + strand, within MPMX20_03527at 3723.468 kb on + strand, within MPMX20_03527at 3723.543 kb on + strand, within MPMX20_03527at 3723.580 kb on + strand, within MPMX20_03527at 3723.588 kb on - strand, within MPMX20_03527at 3723.588 kb on - strand, within MPMX20_03527at 3723.588 kb on - strand, within MPMX20_03527at 3723.677 kb on + strand, within MPMX20_03527at 3723.683 kb on - strand, within MPMX20_03527at 3723.702 kb on + strand, within MPMX20_03527

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (C)
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3,720,571 + MPMX20_03524 0.55 -0.7
3,720,571 + MPMX20_03524 0.55 -0.7
3,720,575 - MPMX20_03524 0.55 +0.5
3,720,579 - MPMX20_03524 0.55 -1.2
3,720,579 - MPMX20_03524 0.55 -1.1
3,720,689 - MPMX20_03524 0.60 +0.3
3,720,704 - MPMX20_03524 0.61 -0.1
3,720,718 + MPMX20_03524 0.61 +0.5
3,720,747 + MPMX20_03524 0.63 -1.5
3,720,747 + MPMX20_03524 0.63 -1.8
3,720,747 + MPMX20_03524 0.63 +0.6
3,720,747 + MPMX20_03524 0.63 -0.5
3,720,755 - MPMX20_03524 0.63 -1.6
3,720,755 - MPMX20_03524 0.63 -1.7
3,720,803 + MPMX20_03524 0.65 -1.2
3,720,813 + MPMX20_03524 0.66 -1.2
3,720,844 - MPMX20_03524 0.67 -1.6
3,720,869 + MPMX20_03524 0.68 +0.4
3,720,869 + MPMX20_03524 0.68 -0.8
3,720,877 - MPMX20_03524 0.68 -1.5
3,720,877 - MPMX20_03524 0.68 -1.1
3,720,900 - MPMX20_03524 0.69 +0.2
3,721,032 - MPMX20_03524 0.75 -1.3
3,721,032 - MPMX20_03524 0.75 +0.1
3,721,094 - MPMX20_03524 0.78 +0.3
3,721,117 - MPMX20_03524 0.79 -0.7
3,721,198 + MPMX20_03524 0.83 -0.5
3,721,199 + MPMX20_03524 0.83 -0.8
3,721,199 + MPMX20_03524 0.83 -0.9
3,721,199 + MPMX20_03524 0.83 -3.2
3,721,207 - MPMX20_03524 0.83 -2.2
3,721,207 - MPMX20_03524 0.83 -0.6
3,721,207 - MPMX20_03524 0.83 -0.7
3,721,207 - MPMX20_03524 0.83 -0.8
3,721,207 - MPMX20_03524 0.83 +0.5
3,721,207 - MPMX20_03524 0.83 -1.7
3,721,225 - MPMX20_03524 0.84 -0.1
3,721,232 + MPMX20_03524 0.85 -0.9
3,721,240 - MPMX20_03524 0.85 -1.2
3,721,293 + MPMX20_03524 0.87 +1.2
3,721,293 + MPMX20_03524 0.87 -0.9
3,721,296 - MPMX20_03524 0.87 +1.7
3,721,366 + -1.0
3,721,388 - -0.8
3,721,530 - -0.5
3,721,721 + MPMX20_03525 0.14 -2.4
3,721,779 - MPMX20_03525 0.19 -0.7
3,721,817 + MPMX20_03525 0.22 +0.2
3,721,846 - MPMX20_03525 0.25 -1.3
3,721,888 + MPMX20_03525 0.28 -0.7
3,721,909 + MPMX20_03525 0.30 +0.1
3,721,909 - MPMX20_03525 0.30 -3.2
3,722,015 - MPMX20_03525 0.39 -1.3
3,722,024 + MPMX20_03525 0.39 -0.4
3,722,032 + MPMX20_03525 0.40 -2.4
3,722,032 - MPMX20_03525 0.40 -1.6
3,722,055 + MPMX20_03525 0.42 -0.7
3,722,063 - MPMX20_03525 0.43 -0.9
3,722,131 - MPMX20_03525 0.48 -0.7
3,722,187 + MPMX20_03525 0.53 -1.0
3,722,199 + MPMX20_03525 0.54 +0.6
3,722,205 - MPMX20_03525 0.55 -1.4
3,722,214 + MPMX20_03525 0.55 -3.3
3,722,375 + MPMX20_03525 0.69 +0.5
3,722,383 - MPMX20_03525 0.69 -0.9
3,722,447 - MPMX20_03525 0.75 -1.5
3,722,481 + MPMX20_03525 0.78 -2.7
3,722,528 - MPMX20_03525 0.81 -0.9
3,722,535 - MPMX20_03525 0.82 -0.6
3,722,544 + MPMX20_03525 0.83 -0.8
3,722,544 + MPMX20_03525 0.83 -2.0
3,722,544 + MPMX20_03525 0.83 -1.7
3,722,544 + MPMX20_03525 0.83 -0.1
3,722,568 - MPMX20_03525 0.85 -3.2
3,722,598 + MPMX20_03525 0.87 -1.9
3,722,598 + MPMX20_03525 0.87 -0.6
3,722,598 + MPMX20_03525 0.87 -3.6
3,722,603 + MPMX20_03525 0.88 -2.1
3,722,603 + MPMX20_03525 0.88 -0.8
3,722,606 - MPMX20_03525 0.88 -1.9
3,722,611 - MPMX20_03525 0.88 -0.9
3,722,623 - MPMX20_03525 0.89 -0.9
3,722,641 - -1.2
3,722,641 - -1.6
3,722,669 + -1.0
3,722,677 - -0.6
3,722,677 - -2.1
3,722,696 + -1.8
3,722,722 - -1.4
3,722,752 - -2.6
3,722,757 - +0.9
3,722,790 - +1.5
3,722,800 - -0.2
3,722,801 - +0.2
3,722,820 + -2.0
3,722,830 + -0.0
3,722,830 + +1.1
3,722,830 + -1.3
3,722,838 - -1.1
3,722,858 + +0.1
3,722,866 - -1.3
3,723,037 + MPMX20_03526 0.27 +1.3
3,723,045 - MPMX20_03526 0.29 -0.4
3,723,098 - MPMX20_03526 0.41 +5.5
3,723,098 - MPMX20_03526 0.41 -0.3
3,723,105 + MPMX20_03526 0.43 +0.5
3,723,119 + MPMX20_03526 0.46 +0.1
3,723,120 + MPMX20_03526 0.46 +0.0
3,723,125 + MPMX20_03526 0.48 -0.6
3,723,128 - MPMX20_03526 0.48 +1.0
3,723,214 + MPMX20_03526 0.69 +1.6
3,723,258 - MPMX20_03526 0.79 +1.1
3,723,282 - MPMX20_03526 0.85 -0.2
3,723,305 - -1.3
3,723,309 + -1.6
3,723,419 + MPMX20_03527 0.13 +0.7
3,723,468 + MPMX20_03527 0.20 +0.5
3,723,543 + MPMX20_03527 0.30 -0.5
3,723,580 + MPMX20_03527 0.34 +0.1
3,723,588 - MPMX20_03527 0.35 +0.6
3,723,588 - MPMX20_03527 0.35 -1.1
3,723,588 - MPMX20_03527 0.35 +1.5
3,723,677 + MPMX20_03527 0.47 -0.9
3,723,683 - MPMX20_03527 0.48 +1.3
3,723,702 + MPMX20_03527 0.50 -1.5

Or see this region's nucleotide sequence