Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03522 and MPMX20_03523 are separated by 79 nucleotides MPMX20_03523 and MPMX20_03524 overlap by 4 nucleotides
MPMX20_03522: MPMX20_03522 - hypothetical protein, at 3,706,718 to 3,717,892
_03522
MPMX20_03523: MPMX20_03523 - hypothetical protein, at 3,717,972 to 3,719,375
_03523
MPMX20_03524: MPMX20_03524 - Vitamin B12 import ATP-binding protein BtuD, at 3,719,372 to 3,721,570
_03524
Position (kb)
3717
3718
3719
3720 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3717.021 kb on - strand at 3717.097 kb on - strand at 3717.312 kb on + strand at 3717.394 kb on + strand at 3717.396 kb on + strand at 3717.408 kb on + strand at 3717.421 kb on + strand at 3717.443 kb on - strand at 3717.489 kb on + strand at 3717.489 kb on + strand at 3717.497 kb on - strand at 3717.497 kb on - strand at 3717.528 kb on + strand at 3717.528 kb on - strand at 3717.533 kb on + strand at 3717.536 kb on - strand at 3717.723 kb on + strand at 3717.723 kb on + strand at 3717.731 kb on - strand at 3717.731 kb on - strand at 3717.731 kb on - strand at 3717.811 kb on + strand at 3717.841 kb on + strand at 3717.841 kb on + strand at 3717.841 kb on + strand at 3717.842 kb on + strand at 3717.849 kb on - strand at 3717.849 kb on - strand at 3717.849 kb on - strand at 3717.850 kb on - strand at 3717.888 kb on + strand at 3717.963 kb on + strand at 3717.971 kb on - strand at 3718.060 kb on - strand at 3718.060 kb on - strand at 3718.060 kb on - strand at 3718.065 kb on - strand at 3718.116 kb on + strand, within MPMX20_03523 at 3718.166 kb on - strand, within MPMX20_03523 at 3718.230 kb on + strand, within MPMX20_03523 at 3718.275 kb on + strand, within MPMX20_03523 at 3718.286 kb on + strand, within MPMX20_03523 at 3718.296 kb on - strand, within MPMX20_03523 at 3718.360 kb on + strand, within MPMX20_03523 at 3718.363 kb on - strand, within MPMX20_03523 at 3718.377 kb on + strand, within MPMX20_03523 at 3718.377 kb on + strand, within MPMX20_03523 at 3718.377 kb on + strand, within MPMX20_03523 at 3718.385 kb on - strand, within MPMX20_03523 at 3718.385 kb on - strand, within MPMX20_03523 at 3718.385 kb on - strand, within MPMX20_03523 at 3718.421 kb on - strand, within MPMX20_03523 at 3718.510 kb on + strand, within MPMX20_03523 at 3718.596 kb on + strand, within MPMX20_03523 at 3718.604 kb on - strand, within MPMX20_03523 at 3718.604 kb on - strand, within MPMX20_03523 at 3718.621 kb on - strand, within MPMX20_03523 at 3718.651 kb on - strand, within MPMX20_03523 at 3718.651 kb on - strand, within MPMX20_03523 at 3718.653 kb on + strand, within MPMX20_03523 at 3718.702 kb on + strand, within MPMX20_03523 at 3718.796 kb on - strand, within MPMX20_03523 at 3718.813 kb on + strand, within MPMX20_03523 at 3718.816 kb on - strand, within MPMX20_03523 at 3718.816 kb on - strand, within MPMX20_03523 at 3718.823 kb on + strand, within MPMX20_03523 at 3718.831 kb on - strand, within MPMX20_03523 at 3718.900 kb on + strand, within MPMX20_03523 at 3718.997 kb on + strand, within MPMX20_03523 at 3718.997 kb on + strand, within MPMX20_03523 at 3719.031 kb on - strand, within MPMX20_03523 at 3719.061 kb on - strand, within MPMX20_03523 at 3719.103 kb on - strand, within MPMX20_03523 at 3719.105 kb on + strand, within MPMX20_03523 at 3719.105 kb on + strand, within MPMX20_03523 at 3719.120 kb on + strand, within MPMX20_03523 at 3719.163 kb on - strand, within MPMX20_03523 at 3719.182 kb on - strand, within MPMX20_03523 at 3719.213 kb on + strand, within MPMX20_03523 at 3719.221 kb on - strand, within MPMX20_03523 at 3719.221 kb on - strand, within MPMX20_03523 at 3719.221 kb on - strand, within MPMX20_03523 at 3719.221 kb on - strand, within MPMX20_03523 at 3719.263 kb on + strand at 3719.300 kb on + strand at 3719.308 kb on - strand at 3719.357 kb on - strand at 3719.358 kb on + strand at 3719.382 kb on + strand at 3719.411 kb on + strand at 3719.440 kb on - strand at 3719.483 kb on - strand at 3719.491 kb on + strand at 3719.539 kb on + strand at 3719.556 kb on + strand at 3719.710 kb on + strand, within MPMX20_03524 at 3719.710 kb on + strand, within MPMX20_03524 at 3719.710 kb on + strand, within MPMX20_03524 at 3719.710 kb on + strand, within MPMX20_03524 at 3719.718 kb on - strand, within MPMX20_03524 at 3719.719 kb on - strand, within MPMX20_03524 at 3719.743 kb on + strand, within MPMX20_03524 at 3719.824 kb on + strand, within MPMX20_03524 at 3719.888 kb on - strand, within MPMX20_03524 at 3719.892 kb on - strand, within MPMX20_03524 at 3719.908 kb on + strand, within MPMX20_03524 at 3719.928 kb on - strand, within MPMX20_03524 at 3719.938 kb on - strand, within MPMX20_03524 at 3719.971 kb on + strand, within MPMX20_03524 at 3719.971 kb on + strand, within MPMX20_03524 at 3719.971 kb on + strand, within MPMX20_03524 at 3719.971 kb on + strand, within MPMX20_03524 at 3719.979 kb on - strand, within MPMX20_03524 at 3719.979 kb on - strand, within MPMX20_03524 at 3719.979 kb on - strand, within MPMX20_03524 at 3719.979 kb on - strand, within MPMX20_03524 at 3719.979 kb on - strand, within MPMX20_03524 at 3719.979 kb on - strand, within MPMX20_03524 at 3719.979 kb on - strand, within MPMX20_03524 at 3719.979 kb on - strand, within MPMX20_03524 at 3720.020 kb on - strand, within MPMX20_03524 at 3720.040 kb on - strand, within MPMX20_03524 at 3720.055 kb on + strand, within MPMX20_03524 at 3720.063 kb on - strand, within MPMX20_03524 at 3720.125 kb on - strand, within MPMX20_03524 at 3720.165 kb on + strand, within MPMX20_03524 at 3720.180 kb on - strand, within MPMX20_03524 at 3720.185 kb on + strand, within MPMX20_03524 at 3720.207 kb on + strand, within MPMX20_03524 at 3720.294 kb on + strand, within MPMX20_03524 at 3720.316 kb on + strand, within MPMX20_03524 at 3720.326 kb on - strand, within MPMX20_03524
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 3,717,021 - -0.7 3,717,097 - -1.4 3,717,312 + +1.7 3,717,394 + -3.1 3,717,396 + -0.7 3,717,408 + +0.9 3,717,421 + -0.8 3,717,443 - -1.3 3,717,489 + -1.1 3,717,489 + -0.7 3,717,497 - +0.0 3,717,497 - +0.4 3,717,528 + -2.7 3,717,528 - -1.2 3,717,533 + -1.9 3,717,536 - -2.8 3,717,723 + -0.4 3,717,723 + -2.2 3,717,731 - +0.2 3,717,731 - -1.5 3,717,731 - +1.3 3,717,811 + -0.4 3,717,841 + -1.8 3,717,841 + -0.6 3,717,841 + -1.6 3,717,842 + -2.3 3,717,849 - -1.4 3,717,849 - -1.4 3,717,849 - -0.7 3,717,850 - -2.4 3,717,888 + -1.4 3,717,963 + +0.0 3,717,971 - +1.7 3,718,060 - +0.7 3,718,060 - -3.8 3,718,060 - -1.7 3,718,065 - -0.9 3,718,116 + MPMX20_03523 0.10 -1.3 3,718,166 - MPMX20_03523 0.14 +1.1 3,718,230 + MPMX20_03523 0.18 -2.9 3,718,275 + MPMX20_03523 0.22 -1.0 3,718,286 + MPMX20_03523 0.22 -3.2 3,718,296 - MPMX20_03523 0.23 -1.1 3,718,360 + MPMX20_03523 0.28 -2.2 3,718,363 - MPMX20_03523 0.28 -0.7 3,718,377 + MPMX20_03523 0.29 -2.5 3,718,377 + MPMX20_03523 0.29 +1.0 3,718,377 + MPMX20_03523 0.29 -1.7 3,718,385 - MPMX20_03523 0.29 -0.7 3,718,385 - MPMX20_03523 0.29 -0.9 3,718,385 - MPMX20_03523 0.29 -2.5 3,718,421 - MPMX20_03523 0.32 -2.4 3,718,510 + MPMX20_03523 0.38 -0.8 3,718,596 + MPMX20_03523 0.44 -1.4 3,718,604 - MPMX20_03523 0.45 -0.9 3,718,604 - MPMX20_03523 0.45 +0.5 3,718,621 - MPMX20_03523 0.46 -2.4 3,718,651 - MPMX20_03523 0.48 -1.3 3,718,651 - MPMX20_03523 0.48 -1.9 3,718,653 + MPMX20_03523 0.49 -3.0 3,718,702 + MPMX20_03523 0.52 +0.3 3,718,796 - MPMX20_03523 0.59 -3.7 3,718,813 + MPMX20_03523 0.60 -2.6 3,718,816 - MPMX20_03523 0.60 +0.3 3,718,816 - MPMX20_03523 0.60 -0.4 3,718,823 + MPMX20_03523 0.61 +0.3 3,718,831 - MPMX20_03523 0.61 -1.5 3,718,900 + MPMX20_03523 0.66 -3.9 3,718,997 + MPMX20_03523 0.73 -0.9 3,718,997 + MPMX20_03523 0.73 -1.6 3,719,031 - MPMX20_03523 0.75 -0.7 3,719,061 - MPMX20_03523 0.78 -2.9 3,719,103 - MPMX20_03523 0.81 -1.6 3,719,105 + MPMX20_03523 0.81 -0.1 3,719,105 + MPMX20_03523 0.81 -0.0 3,719,120 + MPMX20_03523 0.82 +0.4 3,719,163 - MPMX20_03523 0.85 -2.4 3,719,182 - MPMX20_03523 0.86 +0.4 3,719,213 + MPMX20_03523 0.88 -1.6 3,719,221 - MPMX20_03523 0.89 -1.6 3,719,221 - MPMX20_03523 0.89 -1.9 3,719,221 - MPMX20_03523 0.89 +0.2 3,719,221 - MPMX20_03523 0.89 -0.5 3,719,263 + +0.3 3,719,300 + -2.1 3,719,308 - -1.6 3,719,357 - -0.4 3,719,358 + +0.9 3,719,382 + -1.3 3,719,411 + +0.4 3,719,440 - -0.6 3,719,483 - -0.9 3,719,491 + -2.2 3,719,539 + -2.1 3,719,556 + -2.1 3,719,710 + MPMX20_03524 0.15 -0.7 3,719,710 + MPMX20_03524 0.15 -0.4 3,719,710 + MPMX20_03524 0.15 +0.4 3,719,710 + MPMX20_03524 0.15 +0.1 3,719,718 - MPMX20_03524 0.16 -0.9 3,719,719 - MPMX20_03524 0.16 -1.6 3,719,743 + MPMX20_03524 0.17 +0.3 3,719,824 + MPMX20_03524 0.21 -0.5 3,719,888 - MPMX20_03524 0.23 -0.9 3,719,892 - MPMX20_03524 0.24 -1.8 3,719,908 + MPMX20_03524 0.24 -1.6 3,719,928 - MPMX20_03524 0.25 -1.1 3,719,938 - MPMX20_03524 0.26 -2.1 3,719,971 + MPMX20_03524 0.27 +0.7 3,719,971 + MPMX20_03524 0.27 -3.0 3,719,971 + MPMX20_03524 0.27 -1.0 3,719,971 + MPMX20_03524 0.27 -1.6 3,719,979 - MPMX20_03524 0.28 -0.2 3,719,979 - MPMX20_03524 0.28 -0.4 3,719,979 - MPMX20_03524 0.28 -1.6 3,719,979 - MPMX20_03524 0.28 -2.4 3,719,979 - MPMX20_03524 0.28 -2.0 3,719,979 - MPMX20_03524 0.28 +0.9 3,719,979 - MPMX20_03524 0.28 -2.9 3,719,979 - MPMX20_03524 0.28 -0.5 3,720,020 - MPMX20_03524 0.29 -1.7 3,720,040 - MPMX20_03524 0.30 -0.5 3,720,055 + MPMX20_03524 0.31 -1.5 3,720,063 - MPMX20_03524 0.31 -3.1 3,720,125 - MPMX20_03524 0.34 -1.7 3,720,165 + MPMX20_03524 0.36 +0.4 3,720,180 - MPMX20_03524 0.37 +0.3 3,720,185 + MPMX20_03524 0.37 -0.5 3,720,207 + MPMX20_03524 0.38 -3.9 3,720,294 + MPMX20_03524 0.42 -0.6 3,720,316 + MPMX20_03524 0.43 +0.2 3,720,326 - MPMX20_03524 0.43 -2.6
Or see this region's nucleotide sequence