Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03523

Experiment: L-Asparagine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03522 and MPMX20_03523 are separated by 79 nucleotidesMPMX20_03523 and MPMX20_03524 overlap by 4 nucleotides MPMX20_03522: MPMX20_03522 - hypothetical protein, at 3,706,718 to 3,717,892 _03522 MPMX20_03523: MPMX20_03523 - hypothetical protein, at 3,717,972 to 3,719,375 _03523 MPMX20_03524: MPMX20_03524 - Vitamin B12 import ATP-binding protein BtuD, at 3,719,372 to 3,721,570 _03524 Position (kb) 3717 3718 3719 3720Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3717.021 kb on - strandat 3717.097 kb on - strandat 3717.312 kb on + strandat 3717.394 kb on + strandat 3717.396 kb on + strandat 3717.408 kb on + strandat 3717.421 kb on + strandat 3717.443 kb on - strandat 3717.489 kb on + strandat 3717.489 kb on + strandat 3717.497 kb on - strandat 3717.497 kb on - strandat 3717.528 kb on + strandat 3717.528 kb on - strandat 3717.533 kb on + strandat 3717.536 kb on - strandat 3717.723 kb on + strandat 3717.723 kb on + strandat 3717.731 kb on - strandat 3717.731 kb on - strandat 3717.731 kb on - strandat 3717.811 kb on + strandat 3717.841 kb on + strandat 3717.841 kb on + strandat 3717.841 kb on + strandat 3717.842 kb on + strandat 3717.849 kb on - strandat 3717.849 kb on - strandat 3717.849 kb on - strandat 3717.850 kb on - strandat 3717.888 kb on + strandat 3717.963 kb on + strandat 3717.971 kb on - strandat 3718.060 kb on - strandat 3718.060 kb on - strandat 3718.060 kb on - strandat 3718.065 kb on - strandat 3718.116 kb on + strand, within MPMX20_03523at 3718.166 kb on - strand, within MPMX20_03523at 3718.230 kb on + strand, within MPMX20_03523at 3718.275 kb on + strand, within MPMX20_03523at 3718.286 kb on + strand, within MPMX20_03523at 3718.296 kb on - strand, within MPMX20_03523at 3718.360 kb on + strand, within MPMX20_03523at 3718.363 kb on - strand, within MPMX20_03523at 3718.377 kb on + strand, within MPMX20_03523at 3718.377 kb on + strand, within MPMX20_03523at 3718.377 kb on + strand, within MPMX20_03523at 3718.385 kb on - strand, within MPMX20_03523at 3718.385 kb on - strand, within MPMX20_03523at 3718.385 kb on - strand, within MPMX20_03523at 3718.421 kb on - strand, within MPMX20_03523at 3718.510 kb on + strand, within MPMX20_03523at 3718.596 kb on + strand, within MPMX20_03523at 3718.604 kb on - strand, within MPMX20_03523at 3718.604 kb on - strand, within MPMX20_03523at 3718.621 kb on - strand, within MPMX20_03523at 3718.651 kb on - strand, within MPMX20_03523at 3718.651 kb on - strand, within MPMX20_03523at 3718.653 kb on + strand, within MPMX20_03523at 3718.702 kb on + strand, within MPMX20_03523at 3718.796 kb on - strand, within MPMX20_03523at 3718.813 kb on + strand, within MPMX20_03523at 3718.816 kb on - strand, within MPMX20_03523at 3718.816 kb on - strand, within MPMX20_03523at 3718.823 kb on + strand, within MPMX20_03523at 3718.831 kb on - strand, within MPMX20_03523at 3718.900 kb on + strand, within MPMX20_03523at 3718.997 kb on + strand, within MPMX20_03523at 3718.997 kb on + strand, within MPMX20_03523at 3719.031 kb on - strand, within MPMX20_03523at 3719.061 kb on - strand, within MPMX20_03523at 3719.103 kb on - strand, within MPMX20_03523at 3719.105 kb on + strand, within MPMX20_03523at 3719.105 kb on + strand, within MPMX20_03523at 3719.120 kb on + strand, within MPMX20_03523at 3719.163 kb on - strand, within MPMX20_03523at 3719.182 kb on - strand, within MPMX20_03523at 3719.213 kb on + strand, within MPMX20_03523at 3719.221 kb on - strand, within MPMX20_03523at 3719.221 kb on - strand, within MPMX20_03523at 3719.221 kb on - strand, within MPMX20_03523at 3719.221 kb on - strand, within MPMX20_03523at 3719.263 kb on + strandat 3719.300 kb on + strandat 3719.308 kb on - strandat 3719.357 kb on - strandat 3719.358 kb on + strandat 3719.382 kb on + strandat 3719.411 kb on + strandat 3719.440 kb on - strandat 3719.483 kb on - strandat 3719.491 kb on + strandat 3719.539 kb on + strandat 3719.556 kb on + strandat 3719.710 kb on + strand, within MPMX20_03524at 3719.710 kb on + strand, within MPMX20_03524at 3719.710 kb on + strand, within MPMX20_03524at 3719.710 kb on + strand, within MPMX20_03524at 3719.718 kb on - strand, within MPMX20_03524at 3719.719 kb on - strand, within MPMX20_03524at 3719.743 kb on + strand, within MPMX20_03524at 3719.824 kb on + strand, within MPMX20_03524at 3719.888 kb on - strand, within MPMX20_03524at 3719.892 kb on - strand, within MPMX20_03524at 3719.908 kb on + strand, within MPMX20_03524at 3719.928 kb on - strand, within MPMX20_03524at 3719.938 kb on - strand, within MPMX20_03524at 3719.971 kb on + strand, within MPMX20_03524at 3719.971 kb on + strand, within MPMX20_03524at 3719.971 kb on + strand, within MPMX20_03524at 3719.971 kb on + strand, within MPMX20_03524at 3719.979 kb on - strand, within MPMX20_03524at 3719.979 kb on - strand, within MPMX20_03524at 3719.979 kb on - strand, within MPMX20_03524at 3719.979 kb on - strand, within MPMX20_03524at 3719.979 kb on - strand, within MPMX20_03524at 3719.979 kb on - strand, within MPMX20_03524at 3719.979 kb on - strand, within MPMX20_03524at 3719.979 kb on - strand, within MPMX20_03524at 3720.020 kb on - strand, within MPMX20_03524at 3720.040 kb on - strand, within MPMX20_03524at 3720.055 kb on + strand, within MPMX20_03524at 3720.063 kb on - strand, within MPMX20_03524at 3720.125 kb on - strand, within MPMX20_03524at 3720.165 kb on + strand, within MPMX20_03524at 3720.180 kb on - strand, within MPMX20_03524at 3720.185 kb on + strand, within MPMX20_03524at 3720.207 kb on + strand, within MPMX20_03524at 3720.294 kb on + strand, within MPMX20_03524at 3720.316 kb on + strand, within MPMX20_03524at 3720.326 kb on - strand, within MPMX20_03524

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (C)
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3,717,021 - -0.7
3,717,097 - -1.4
3,717,312 + +1.7
3,717,394 + -3.1
3,717,396 + -0.7
3,717,408 + +0.9
3,717,421 + -0.8
3,717,443 - -1.3
3,717,489 + -1.1
3,717,489 + -0.7
3,717,497 - +0.0
3,717,497 - +0.4
3,717,528 + -2.7
3,717,528 - -1.2
3,717,533 + -1.9
3,717,536 - -2.8
3,717,723 + -0.4
3,717,723 + -2.2
3,717,731 - +0.2
3,717,731 - -1.5
3,717,731 - +1.3
3,717,811 + -0.4
3,717,841 + -1.8
3,717,841 + -0.6
3,717,841 + -1.6
3,717,842 + -2.3
3,717,849 - -1.4
3,717,849 - -1.4
3,717,849 - -0.7
3,717,850 - -2.4
3,717,888 + -1.4
3,717,963 + +0.0
3,717,971 - +1.7
3,718,060 - +0.7
3,718,060 - -3.8
3,718,060 - -1.7
3,718,065 - -0.9
3,718,116 + MPMX20_03523 0.10 -1.3
3,718,166 - MPMX20_03523 0.14 +1.1
3,718,230 + MPMX20_03523 0.18 -2.9
3,718,275 + MPMX20_03523 0.22 -1.0
3,718,286 + MPMX20_03523 0.22 -3.2
3,718,296 - MPMX20_03523 0.23 -1.1
3,718,360 + MPMX20_03523 0.28 -2.2
3,718,363 - MPMX20_03523 0.28 -0.7
3,718,377 + MPMX20_03523 0.29 -2.5
3,718,377 + MPMX20_03523 0.29 +1.0
3,718,377 + MPMX20_03523 0.29 -1.7
3,718,385 - MPMX20_03523 0.29 -0.7
3,718,385 - MPMX20_03523 0.29 -0.9
3,718,385 - MPMX20_03523 0.29 -2.5
3,718,421 - MPMX20_03523 0.32 -2.4
3,718,510 + MPMX20_03523 0.38 -0.8
3,718,596 + MPMX20_03523 0.44 -1.4
3,718,604 - MPMX20_03523 0.45 -0.9
3,718,604 - MPMX20_03523 0.45 +0.5
3,718,621 - MPMX20_03523 0.46 -2.4
3,718,651 - MPMX20_03523 0.48 -1.3
3,718,651 - MPMX20_03523 0.48 -1.9
3,718,653 + MPMX20_03523 0.49 -3.0
3,718,702 + MPMX20_03523 0.52 +0.3
3,718,796 - MPMX20_03523 0.59 -3.7
3,718,813 + MPMX20_03523 0.60 -2.6
3,718,816 - MPMX20_03523 0.60 +0.3
3,718,816 - MPMX20_03523 0.60 -0.4
3,718,823 + MPMX20_03523 0.61 +0.3
3,718,831 - MPMX20_03523 0.61 -1.5
3,718,900 + MPMX20_03523 0.66 -3.9
3,718,997 + MPMX20_03523 0.73 -0.9
3,718,997 + MPMX20_03523 0.73 -1.6
3,719,031 - MPMX20_03523 0.75 -0.7
3,719,061 - MPMX20_03523 0.78 -2.9
3,719,103 - MPMX20_03523 0.81 -1.6
3,719,105 + MPMX20_03523 0.81 -0.1
3,719,105 + MPMX20_03523 0.81 -0.0
3,719,120 + MPMX20_03523 0.82 +0.4
3,719,163 - MPMX20_03523 0.85 -2.4
3,719,182 - MPMX20_03523 0.86 +0.4
3,719,213 + MPMX20_03523 0.88 -1.6
3,719,221 - MPMX20_03523 0.89 -1.6
3,719,221 - MPMX20_03523 0.89 -1.9
3,719,221 - MPMX20_03523 0.89 +0.2
3,719,221 - MPMX20_03523 0.89 -0.5
3,719,263 + +0.3
3,719,300 + -2.1
3,719,308 - -1.6
3,719,357 - -0.4
3,719,358 + +0.9
3,719,382 + -1.3
3,719,411 + +0.4
3,719,440 - -0.6
3,719,483 - -0.9
3,719,491 + -2.2
3,719,539 + -2.1
3,719,556 + -2.1
3,719,710 + MPMX20_03524 0.15 -0.7
3,719,710 + MPMX20_03524 0.15 -0.4
3,719,710 + MPMX20_03524 0.15 +0.4
3,719,710 + MPMX20_03524 0.15 +0.1
3,719,718 - MPMX20_03524 0.16 -0.9
3,719,719 - MPMX20_03524 0.16 -1.6
3,719,743 + MPMX20_03524 0.17 +0.3
3,719,824 + MPMX20_03524 0.21 -0.5
3,719,888 - MPMX20_03524 0.23 -0.9
3,719,892 - MPMX20_03524 0.24 -1.8
3,719,908 + MPMX20_03524 0.24 -1.6
3,719,928 - MPMX20_03524 0.25 -1.1
3,719,938 - MPMX20_03524 0.26 -2.1
3,719,971 + MPMX20_03524 0.27 +0.7
3,719,971 + MPMX20_03524 0.27 -3.0
3,719,971 + MPMX20_03524 0.27 -1.0
3,719,971 + MPMX20_03524 0.27 -1.6
3,719,979 - MPMX20_03524 0.28 -0.2
3,719,979 - MPMX20_03524 0.28 -0.4
3,719,979 - MPMX20_03524 0.28 -1.6
3,719,979 - MPMX20_03524 0.28 -2.4
3,719,979 - MPMX20_03524 0.28 -2.0
3,719,979 - MPMX20_03524 0.28 +0.9
3,719,979 - MPMX20_03524 0.28 -2.9
3,719,979 - MPMX20_03524 0.28 -0.5
3,720,020 - MPMX20_03524 0.29 -1.7
3,720,040 - MPMX20_03524 0.30 -0.5
3,720,055 + MPMX20_03524 0.31 -1.5
3,720,063 - MPMX20_03524 0.31 -3.1
3,720,125 - MPMX20_03524 0.34 -1.7
3,720,165 + MPMX20_03524 0.36 +0.4
3,720,180 - MPMX20_03524 0.37 +0.3
3,720,185 + MPMX20_03524 0.37 -0.5
3,720,207 + MPMX20_03524 0.38 -3.9
3,720,294 + MPMX20_03524 0.42 -0.6
3,720,316 + MPMX20_03524 0.43 +0.2
3,720,326 - MPMX20_03524 0.43 -2.6

Or see this region's nucleotide sequence