Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02475 and MPMX20_02476 overlap by 14 nucleotides MPMX20_02476 and MPMX20_02477 overlap by 1 nucleotides MPMX20_02477 and MPMX20_02478 are separated by 1 nucleotides MPMX20_02478 and MPMX20_02479 are separated by 147 nucleotides
MPMX20_02475: MPMX20_02475 - Putrescine export system permease protein SapB, at 2,615,619 to 2,616,584
_02475
MPMX20_02476: MPMX20_02476 - Putrescine export system permease protein SapC, at 2,616,571 to 2,617,461
_02476
MPMX20_02477: MPMX20_02477 - Peptide transport system ATP-binding protein SapD, at 2,617,461 to 2,618,453
_02477
MPMX20_02478: MPMX20_02478 - Putrescine export system ATP-binding protein SapF, at 2,618,455 to 2,619,261
_02478
MPMX20_02479: MPMX20_02479 - Transposon Tn10 TetC protein, at 2,619,409 to 2,619,999
_02479
Position (kb)
2617
2618
2619 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2616.542 kb on + strand at 2616.585 kb on + strand at 2616.721 kb on - strand, within MPMX20_02476 at 2616.789 kb on + strand, within MPMX20_02476 at 2616.931 kb on - strand, within MPMX20_02476 at 2616.981 kb on - strand, within MPMX20_02476 at 2617.099 kb on + strand, within MPMX20_02476 at 2617.150 kb on + strand, within MPMX20_02476 at 2617.158 kb on - strand, within MPMX20_02476 at 2617.296 kb on + strand, within MPMX20_02476 at 2617.349 kb on + strand, within MPMX20_02476 at 2617.426 kb on + strand at 2617.426 kb on + strand at 2617.426 kb on + strand at 2617.426 kb on + strand at 2617.434 kb on - strand at 2617.434 kb on - strand at 2617.540 kb on + strand at 2617.546 kb on + strand at 2617.548 kb on - strand at 2617.601 kb on - strand, within MPMX20_02477 at 2617.651 kb on + strand, within MPMX20_02477 at 2617.731 kb on - strand, within MPMX20_02477 at 2617.762 kb on + strand, within MPMX20_02477 at 2617.762 kb on + strand, within MPMX20_02477 at 2618.050 kb on - strand, within MPMX20_02477 at 2618.076 kb on - strand, within MPMX20_02477 at 2618.115 kb on - strand, within MPMX20_02477 at 2618.188 kb on + strand, within MPMX20_02477 at 2618.195 kb on + strand, within MPMX20_02477 at 2618.201 kb on - strand, within MPMX20_02477 at 2618.203 kb on - strand, within MPMX20_02477 at 2618.203 kb on - strand, within MPMX20_02477 at 2618.260 kb on + strand, within MPMX20_02477 at 2618.299 kb on + strand, within MPMX20_02477 at 2618.312 kb on + strand, within MPMX20_02477 at 2618.312 kb on - strand, within MPMX20_02477 at 2618.457 kb on + strand at 2618.485 kb on - strand at 2618.487 kb on + strand at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.555 kb on + strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.563 kb on - strand, within MPMX20_02478 at 2618.644 kb on + strand, within MPMX20_02478 at 2618.731 kb on + strand, within MPMX20_02478 at 2618.733 kb on + strand, within MPMX20_02478 at 2618.862 kb on + strand, within MPMX20_02478 at 2618.915 kb on + strand, within MPMX20_02478 at 2618.997 kb on + strand, within MPMX20_02478 at 2619.114 kb on + strand, within MPMX20_02478 at 2619.114 kb on + strand, within MPMX20_02478 at 2619.114 kb on + strand, within MPMX20_02478 at 2619.132 kb on + strand, within MPMX20_02478 at 2619.150 kb on + strand, within MPMX20_02478 at 2619.327 kb on + strand at 2619.351 kb on + strand at 2619.371 kb on + strand at 2619.371 kb on + strand at 2619.371 kb on + strand at 2619.379 kb on - strand at 2619.401 kb on - strand at 2619.425 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 2,616,542 + -1.4 2,616,585 + -3.4 2,616,721 - MPMX20_02476 0.17 -0.7 2,616,789 + MPMX20_02476 0.24 -0.3 2,616,931 - MPMX20_02476 0.40 -1.5 2,616,981 - MPMX20_02476 0.46 -1.5 2,617,099 + MPMX20_02476 0.59 -1.7 2,617,150 + MPMX20_02476 0.65 -2.6 2,617,158 - MPMX20_02476 0.66 -1.7 2,617,296 + MPMX20_02476 0.81 +1.3 2,617,349 + MPMX20_02476 0.87 -1.3 2,617,426 + -2.6 2,617,426 + -2.0 2,617,426 + -1.0 2,617,426 + -3.1 2,617,434 - -3.1 2,617,434 - -2.0 2,617,540 + -1.5 2,617,546 + -1.7 2,617,548 - -1.0 2,617,601 - MPMX20_02477 0.14 -0.3 2,617,651 + MPMX20_02477 0.19 +1.3 2,617,731 - MPMX20_02477 0.27 -0.3 2,617,762 + MPMX20_02477 0.30 -1.0 2,617,762 + MPMX20_02477 0.30 -1.9 2,618,050 - MPMX20_02477 0.59 -2.8 2,618,076 - MPMX20_02477 0.62 -2.0 2,618,115 - MPMX20_02477 0.66 -0.3 2,618,188 + MPMX20_02477 0.73 -2.5 2,618,195 + MPMX20_02477 0.74 -0.7 2,618,201 - MPMX20_02477 0.75 -2.5 2,618,203 - MPMX20_02477 0.75 -1.9 2,618,203 - MPMX20_02477 0.75 +1.3 2,618,260 + MPMX20_02477 0.80 +0.3 2,618,299 + MPMX20_02477 0.84 -1.5 2,618,312 + MPMX20_02477 0.86 -3.1 2,618,312 - MPMX20_02477 0.86 +0.7 2,618,457 + -2.3 2,618,485 - -2.1 2,618,487 + -2.4 2,618,555 + MPMX20_02478 0.12 -2.1 2,618,555 + MPMX20_02478 0.12 -1.7 2,618,555 + MPMX20_02478 0.12 -1.0 2,618,555 + MPMX20_02478 0.12 -2.1 2,618,555 + MPMX20_02478 0.12 -2.9 2,618,555 + MPMX20_02478 0.12 -1.9 2,618,555 + MPMX20_02478 0.12 -3.0 2,618,555 + MPMX20_02478 0.12 -4.2 2,618,555 + MPMX20_02478 0.12 -1.9 2,618,555 + MPMX20_02478 0.12 -1.9 2,618,555 + MPMX20_02478 0.12 -0.9 2,618,555 + MPMX20_02478 0.12 -1.5 2,618,555 + MPMX20_02478 0.12 -3.3 2,618,555 + MPMX20_02478 0.12 -3.3 2,618,555 + MPMX20_02478 0.12 -1.0 2,618,563 - MPMX20_02478 0.13 -1.3 2,618,563 - MPMX20_02478 0.13 -2.1 2,618,563 - MPMX20_02478 0.13 -1.7 2,618,563 - MPMX20_02478 0.13 -1.3 2,618,563 - MPMX20_02478 0.13 -1.0 2,618,563 - MPMX20_02478 0.13 -0.3 2,618,563 - MPMX20_02478 0.13 -1.0 2,618,563 - MPMX20_02478 0.13 +0.3 2,618,563 - MPMX20_02478 0.13 -0.9 2,618,563 - MPMX20_02478 0.13 +0.3 2,618,563 - MPMX20_02478 0.13 -0.7 2,618,563 - MPMX20_02478 0.13 -2.7 2,618,563 - MPMX20_02478 0.13 -0.7 2,618,563 - MPMX20_02478 0.13 -0.7 2,618,563 - MPMX20_02478 0.13 -1.0 2,618,644 + MPMX20_02478 0.23 -0.7 2,618,731 + MPMX20_02478 0.34 -1.0 2,618,733 + MPMX20_02478 0.34 -1.9 2,618,862 + MPMX20_02478 0.50 -2.0 2,618,915 + MPMX20_02478 0.57 -1.5 2,618,997 + MPMX20_02478 0.67 -0.3 2,619,114 + MPMX20_02478 0.82 -1.7 2,619,114 + MPMX20_02478 0.82 -2.4 2,619,114 + MPMX20_02478 0.82 -1.4 2,619,132 + MPMX20_02478 0.84 -2.8 2,619,150 + MPMX20_02478 0.86 +0.1 2,619,327 + +0.5 2,619,351 + +0.7 2,619,371 + +0.6 2,619,371 + +0.5 2,619,371 + +0.2 2,619,379 - +1.5 2,619,401 - -0.7 2,619,425 - -0.1
Or see this region's nucleotide sequence