Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01142

Experiment: L-Asparagine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01141 and MPMX20_01142 are separated by 9 nucleotidesMPMX20_01142 and MPMX20_01143 overlap by 50 nucleotides MPMX20_01141: MPMX20_01141 - Multidrug resistance protein MdtA, at 1,201,216 to 1,202,277 _01141 MPMX20_01142: MPMX20_01142 - Efflux pump membrane transporter BepG, at 1,202,287 to 1,205,421 _01142 MPMX20_01143: MPMX20_01143 - Putative glutamate--cysteine ligase 2, at 1,205,372 to 1,206,493 _01143 Position (kb) 1202 1203 1204 1205 1206Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1201.326 kb on - strand, within MPMX20_01141at 1201.334 kb on - strand, within MPMX20_01141at 1201.339 kb on - strand, within MPMX20_01141at 1201.349 kb on - strand, within MPMX20_01141at 1201.387 kb on - strand, within MPMX20_01141at 1201.497 kb on + strand, within MPMX20_01141at 1201.499 kb on - strand, within MPMX20_01141at 1201.503 kb on - strand, within MPMX20_01141at 1201.505 kb on - strand, within MPMX20_01141at 1201.550 kb on + strand, within MPMX20_01141at 1201.556 kb on + strand, within MPMX20_01141at 1201.558 kb on - strand, within MPMX20_01141at 1201.558 kb on - strand, within MPMX20_01141at 1201.574 kb on - strand, within MPMX20_01141at 1201.581 kb on - strand, within MPMX20_01141at 1201.638 kb on - strand, within MPMX20_01141at 1201.638 kb on - strand, within MPMX20_01141at 1201.641 kb on + strand, within MPMX20_01141at 1201.699 kb on - strand, within MPMX20_01141at 1201.778 kb on - strand, within MPMX20_01141at 1201.778 kb on - strand, within MPMX20_01141at 1201.921 kb on + strand, within MPMX20_01141at 1202.118 kb on + strand, within MPMX20_01141at 1202.126 kb on - strand, within MPMX20_01141at 1202.229 kb on - strandat 1202.337 kb on + strandat 1202.337 kb on + strandat 1202.337 kb on + strandat 1202.340 kb on - strandat 1202.345 kb on - strandat 1202.345 kb on - strandat 1202.347 kb on - strandat 1202.405 kb on - strandat 1202.498 kb on - strandat 1202.524 kb on - strandat 1202.539 kb on - strandat 1202.582 kb on + strandat 1202.605 kb on + strand, within MPMX20_01142at 1202.702 kb on + strand, within MPMX20_01142at 1202.702 kb on + strand, within MPMX20_01142at 1202.708 kb on + strand, within MPMX20_01142at 1202.710 kb on - strand, within MPMX20_01142at 1202.716 kb on - strand, within MPMX20_01142at 1202.809 kb on + strand, within MPMX20_01142at 1202.809 kb on + strand, within MPMX20_01142at 1202.817 kb on - strand, within MPMX20_01142at 1202.873 kb on + strand, within MPMX20_01142at 1202.881 kb on - strand, within MPMX20_01142at 1202.896 kb on - strand, within MPMX20_01142at 1202.899 kb on + strand, within MPMX20_01142at 1202.906 kb on - strand, within MPMX20_01142at 1202.938 kb on + strand, within MPMX20_01142at 1202.951 kb on - strand, within MPMX20_01142at 1202.995 kb on + strand, within MPMX20_01142at 1203.061 kb on - strand, within MPMX20_01142at 1203.137 kb on + strand, within MPMX20_01142at 1203.142 kb on + strand, within MPMX20_01142at 1203.145 kb on - strand, within MPMX20_01142at 1203.151 kb on - strand, within MPMX20_01142at 1203.164 kb on + strand, within MPMX20_01142at 1203.164 kb on + strand, within MPMX20_01142at 1203.164 kb on + strand, within MPMX20_01142at 1203.164 kb on + strand, within MPMX20_01142at 1203.164 kb on + strand, within MPMX20_01142at 1203.164 kb on + strand, within MPMX20_01142at 1203.172 kb on - strand, within MPMX20_01142at 1203.172 kb on - strand, within MPMX20_01142at 1203.172 kb on - strand, within MPMX20_01142at 1203.179 kb on + strand, within MPMX20_01142at 1203.222 kb on - strand, within MPMX20_01142at 1203.323 kb on + strand, within MPMX20_01142at 1203.331 kb on - strand, within MPMX20_01142at 1203.379 kb on - strand, within MPMX20_01142at 1203.399 kb on + strand, within MPMX20_01142at 1203.401 kb on + strand, within MPMX20_01142at 1203.425 kb on + strand, within MPMX20_01142at 1203.425 kb on + strand, within MPMX20_01142at 1203.435 kb on + strand, within MPMX20_01142at 1203.435 kb on + strand, within MPMX20_01142at 1203.443 kb on - strand, within MPMX20_01142at 1203.443 kb on - strand, within MPMX20_01142at 1203.443 kb on - strand, within MPMX20_01142at 1203.443 kb on - strand, within MPMX20_01142at 1203.443 kb on - strand, within MPMX20_01142at 1203.443 kb on - strand, within MPMX20_01142at 1203.443 kb on - strand, within MPMX20_01142at 1203.443 kb on - strand, within MPMX20_01142at 1203.443 kb on - strand, within MPMX20_01142at 1203.443 kb on - strand, within MPMX20_01142at 1203.443 kb on - strand, within MPMX20_01142at 1203.472 kb on - strand, within MPMX20_01142at 1203.485 kb on + strand, within MPMX20_01142at 1203.520 kb on - strand, within MPMX20_01142at 1203.623 kb on + strand, within MPMX20_01142at 1203.631 kb on - strand, within MPMX20_01142at 1203.641 kb on - strand, within MPMX20_01142at 1203.708 kb on + strand, within MPMX20_01142at 1203.708 kb on + strand, within MPMX20_01142at 1203.716 kb on + strand, within MPMX20_01142at 1203.739 kb on + strand, within MPMX20_01142at 1203.739 kb on + strand, within MPMX20_01142at 1203.740 kb on + strand, within MPMX20_01142at 1203.747 kb on - strand, within MPMX20_01142at 1203.764 kb on + strand, within MPMX20_01142at 1203.847 kb on + strand, within MPMX20_01142at 1203.847 kb on + strand, within MPMX20_01142at 1203.855 kb on - strand, within MPMX20_01142at 1203.855 kb on - strand, within MPMX20_01142at 1203.855 kb on - strand, within MPMX20_01142at 1203.855 kb on - strand, within MPMX20_01142at 1203.877 kb on - strand, within MPMX20_01142at 1203.877 kb on - strand, within MPMX20_01142at 1203.935 kb on + strand, within MPMX20_01142at 1203.943 kb on - strand, within MPMX20_01142at 1203.981 kb on - strand, within MPMX20_01142at 1204.003 kb on - strand, within MPMX20_01142at 1204.039 kb on + strand, within MPMX20_01142at 1204.074 kb on - strand, within MPMX20_01142at 1204.132 kb on - strand, within MPMX20_01142at 1204.132 kb on - strand, within MPMX20_01142at 1204.173 kb on + strand, within MPMX20_01142at 1204.177 kb on - strand, within MPMX20_01142at 1204.200 kb on + strand, within MPMX20_01142at 1204.200 kb on + strand, within MPMX20_01142at 1204.261 kb on + strand, within MPMX20_01142at 1204.261 kb on - strand, within MPMX20_01142at 1204.281 kb on + strand, within MPMX20_01142at 1204.295 kb on + strand, within MPMX20_01142at 1204.309 kb on + strand, within MPMX20_01142at 1204.354 kb on + strand, within MPMX20_01142at 1204.477 kb on - strand, within MPMX20_01142at 1204.643 kb on - strand, within MPMX20_01142at 1204.643 kb on - strand, within MPMX20_01142at 1204.653 kb on - strand, within MPMX20_01142at 1204.667 kb on - strand, within MPMX20_01142at 1204.673 kb on + strand, within MPMX20_01142at 1204.780 kb on + strand, within MPMX20_01142at 1204.888 kb on + strand, within MPMX20_01142at 1204.891 kb on - strand, within MPMX20_01142at 1204.891 kb on - strand, within MPMX20_01142at 1204.896 kb on - strand, within MPMX20_01142at 1204.940 kb on - strand, within MPMX20_01142at 1204.946 kb on - strand, within MPMX20_01142at 1205.245 kb on + strandat 1205.285 kb on - strandat 1205.335 kb on + strandat 1205.350 kb on - strandat 1205.453 kb on + strandat 1205.466 kb on + strandat 1205.466 kb on + strandat 1205.466 kb on + strandat 1205.466 kb on + strandat 1205.468 kb on - strandat 1205.474 kb on - strandat 1205.474 kb on - strandat 1205.474 kb on - strandat 1205.474 kb on - strandat 1205.491 kb on - strand, within MPMX20_01143at 1205.577 kb on + strand, within MPMX20_01143at 1205.585 kb on - strand, within MPMX20_01143at 1205.585 kb on - strand, within MPMX20_01143at 1205.585 kb on - strand, within MPMX20_01143at 1205.585 kb on - strand, within MPMX20_01143at 1205.594 kb on + strand, within MPMX20_01143at 1205.657 kb on - strand, within MPMX20_01143at 1205.754 kb on + strand, within MPMX20_01143at 1205.780 kb on + strand, within MPMX20_01143at 1205.788 kb on - strand, within MPMX20_01143at 1205.863 kb on + strand, within MPMX20_01143at 1205.939 kb on + strand, within MPMX20_01143at 1205.978 kb on - strand, within MPMX20_01143at 1205.995 kb on - strand, within MPMX20_01143at 1206.082 kb on - strand, within MPMX20_01143at 1206.141 kb on + strand, within MPMX20_01143at 1206.166 kb on + strand, within MPMX20_01143at 1206.166 kb on + strand, within MPMX20_01143at 1206.166 kb on + strand, within MPMX20_01143at 1206.174 kb on - strand, within MPMX20_01143at 1206.174 kb on - strand, within MPMX20_01143at 1206.212 kb on + strand, within MPMX20_01143at 1206.237 kb on - strand, within MPMX20_01143at 1206.239 kb on + strand, within MPMX20_01143at 1206.242 kb on - strand, within MPMX20_01143at 1206.283 kb on + strand, within MPMX20_01143at 1206.336 kb on - strand, within MPMX20_01143at 1206.362 kb on - strand, within MPMX20_01143at 1206.390 kb on + strandat 1206.393 kb on - strandat 1206.393 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (C)
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1,201,326 - MPMX20_01141 0.10 -1.8
1,201,334 - MPMX20_01141 0.11 +0.1
1,201,339 - MPMX20_01141 0.12 +1.2
1,201,349 - MPMX20_01141 0.13 +0.5
1,201,387 - MPMX20_01141 0.16 -0.7
1,201,497 + MPMX20_01141 0.26 -0.9
1,201,499 - MPMX20_01141 0.27 +0.9
1,201,503 - MPMX20_01141 0.27 +1.5
1,201,505 - MPMX20_01141 0.27 -1.4
1,201,550 + MPMX20_01141 0.31 +0.7
1,201,556 + MPMX20_01141 0.32 +1.3
1,201,558 - MPMX20_01141 0.32 +0.4
1,201,558 - MPMX20_01141 0.32 -0.9
1,201,574 - MPMX20_01141 0.34 -0.1
1,201,581 - MPMX20_01141 0.34 +1.5
1,201,638 - MPMX20_01141 0.40 -0.1
1,201,638 - MPMX20_01141 0.40 +0.2
1,201,641 + MPMX20_01141 0.40 +0.4
1,201,699 - MPMX20_01141 0.45 +0.6
1,201,778 - MPMX20_01141 0.53 +0.3
1,201,778 - MPMX20_01141 0.53 +1.0
1,201,921 + MPMX20_01141 0.66 +0.4
1,202,118 + MPMX20_01141 0.85 +0.4
1,202,126 - MPMX20_01141 0.86 +0.5
1,202,229 - +0.9
1,202,337 + +0.7
1,202,337 + -0.2
1,202,337 + -0.9
1,202,340 - +0.4
1,202,345 - +1.4
1,202,345 - +0.2
1,202,347 - -0.8
1,202,405 - +0.9
1,202,498 - -0.3
1,202,524 - +0.1
1,202,539 - -0.5
1,202,582 + +0.9
1,202,605 + MPMX20_01142 0.10 -0.8
1,202,702 + MPMX20_01142 0.13 +0.5
1,202,702 + MPMX20_01142 0.13 -0.1
1,202,708 + MPMX20_01142 0.13 -0.4
1,202,710 - MPMX20_01142 0.13 +1.6
1,202,716 - MPMX20_01142 0.14 -0.2
1,202,809 + MPMX20_01142 0.17 +0.3
1,202,809 + MPMX20_01142 0.17 +1.5
1,202,817 - MPMX20_01142 0.17 -2.5
1,202,873 + MPMX20_01142 0.19 -0.1
1,202,881 - MPMX20_01142 0.19 -0.2
1,202,896 - MPMX20_01142 0.19 +1.2
1,202,899 + MPMX20_01142 0.20 +0.4
1,202,906 - MPMX20_01142 0.20 -1.1
1,202,938 + MPMX20_01142 0.21 -2.6
1,202,951 - MPMX20_01142 0.21 +1.1
1,202,995 + MPMX20_01142 0.23 +0.6
1,203,061 - MPMX20_01142 0.25 +0.4
1,203,137 + MPMX20_01142 0.27 +0.2
1,203,142 + MPMX20_01142 0.27 +0.7
1,203,145 - MPMX20_01142 0.27 -3.6
1,203,151 - MPMX20_01142 0.28 -0.1
1,203,164 + MPMX20_01142 0.28 -3.1
1,203,164 + MPMX20_01142 0.28 +1.6
1,203,164 + MPMX20_01142 0.28 +0.4
1,203,164 + MPMX20_01142 0.28 +0.4
1,203,164 + MPMX20_01142 0.28 +0.8
1,203,164 + MPMX20_01142 0.28 -0.4
1,203,172 - MPMX20_01142 0.28 +0.6
1,203,172 - MPMX20_01142 0.28 -1.9
1,203,172 - MPMX20_01142 0.28 +1.4
1,203,179 + MPMX20_01142 0.28 +0.0
1,203,222 - MPMX20_01142 0.30 -0.2
1,203,323 + MPMX20_01142 0.33 -0.3
1,203,331 - MPMX20_01142 0.33 +0.6
1,203,379 - MPMX20_01142 0.35 +0.7
1,203,399 + MPMX20_01142 0.35 +0.7
1,203,401 + MPMX20_01142 0.36 +0.9
1,203,425 + MPMX20_01142 0.36 +0.8
1,203,425 + MPMX20_01142 0.36 +1.2
1,203,435 + MPMX20_01142 0.37 +1.1
1,203,435 + MPMX20_01142 0.37 +0.0
1,203,443 - MPMX20_01142 0.37 +2.9
1,203,443 - MPMX20_01142 0.37 +1.9
1,203,443 - MPMX20_01142 0.37 -0.4
1,203,443 - MPMX20_01142 0.37 +1.1
1,203,443 - MPMX20_01142 0.37 +0.5
1,203,443 - MPMX20_01142 0.37 +0.0
1,203,443 - MPMX20_01142 0.37 +0.2
1,203,443 - MPMX20_01142 0.37 +0.6
1,203,443 - MPMX20_01142 0.37 +0.5
1,203,443 - MPMX20_01142 0.37 -0.4
1,203,443 - MPMX20_01142 0.37 +0.5
1,203,472 - MPMX20_01142 0.38 +0.4
1,203,485 + MPMX20_01142 0.38 -0.1
1,203,520 - MPMX20_01142 0.39 +0.4
1,203,623 + MPMX20_01142 0.43 +1.4
1,203,631 - MPMX20_01142 0.43 -0.1
1,203,641 - MPMX20_01142 0.43 +1.6
1,203,708 + MPMX20_01142 0.45 +0.5
1,203,708 + MPMX20_01142 0.45 -0.2
1,203,716 + MPMX20_01142 0.46 +0.4
1,203,739 + MPMX20_01142 0.46 -0.9
1,203,739 + MPMX20_01142 0.46 +0.9
1,203,740 + MPMX20_01142 0.46 +0.5
1,203,747 - MPMX20_01142 0.47 -0.9
1,203,764 + MPMX20_01142 0.47 -1.2
1,203,847 + MPMX20_01142 0.50 -0.5
1,203,847 + MPMX20_01142 0.50 +2.4
1,203,855 - MPMX20_01142 0.50 -0.0
1,203,855 - MPMX20_01142 0.50 -0.0
1,203,855 - MPMX20_01142 0.50 +1.7
1,203,855 - MPMX20_01142 0.50 +0.3
1,203,877 - MPMX20_01142 0.51 +0.3
1,203,877 - MPMX20_01142 0.51 +0.1
1,203,935 + MPMX20_01142 0.53 +0.1
1,203,943 - MPMX20_01142 0.53 +1.0
1,203,981 - MPMX20_01142 0.54 +0.8
1,204,003 - MPMX20_01142 0.55 +0.2
1,204,039 + MPMX20_01142 0.56 -1.2
1,204,074 - MPMX20_01142 0.57 -0.2
1,204,132 - MPMX20_01142 0.59 -0.0
1,204,132 - MPMX20_01142 0.59 -2.6
1,204,173 + MPMX20_01142 0.60 +0.6
1,204,177 - MPMX20_01142 0.60 +0.2
1,204,200 + MPMX20_01142 0.61 -0.4
1,204,200 + MPMX20_01142 0.61 +2.5
1,204,261 + MPMX20_01142 0.63 -0.1
1,204,261 - MPMX20_01142 0.63 +1.4
1,204,281 + MPMX20_01142 0.64 -0.1
1,204,295 + MPMX20_01142 0.64 -0.3
1,204,309 + MPMX20_01142 0.64 -0.2
1,204,354 + MPMX20_01142 0.66 +0.7
1,204,477 - MPMX20_01142 0.70 +0.3
1,204,643 - MPMX20_01142 0.75 -0.7
1,204,643 - MPMX20_01142 0.75 +0.4
1,204,653 - MPMX20_01142 0.75 -0.4
1,204,667 - MPMX20_01142 0.76 +1.2
1,204,673 + MPMX20_01142 0.76 -0.0
1,204,780 + MPMX20_01142 0.80 +0.7
1,204,888 + MPMX20_01142 0.83 +0.6
1,204,891 - MPMX20_01142 0.83 -0.1
1,204,891 - MPMX20_01142 0.83 +1.4
1,204,896 - MPMX20_01142 0.83 +0.8
1,204,940 - MPMX20_01142 0.85 +0.3
1,204,946 - MPMX20_01142 0.85 -1.5
1,205,245 + +0.1
1,205,285 - -2.0
1,205,335 + -0.4
1,205,350 - +1.7
1,205,453 + -0.9
1,205,466 + +0.2
1,205,466 + -1.1
1,205,466 + -0.1
1,205,466 + +1.1
1,205,468 - -0.4
1,205,474 - -0.2
1,205,474 - +0.5
1,205,474 - -1.8
1,205,474 - -0.4
1,205,491 - MPMX20_01143 0.11 -0.1
1,205,577 + MPMX20_01143 0.18 +0.0
1,205,585 - MPMX20_01143 0.19 -0.0
1,205,585 - MPMX20_01143 0.19 -1.4
1,205,585 - MPMX20_01143 0.19 +0.3
1,205,585 - MPMX20_01143 0.19 +0.9
1,205,594 + MPMX20_01143 0.20 -0.4
1,205,657 - MPMX20_01143 0.25 +0.4
1,205,754 + MPMX20_01143 0.34 -2.0
1,205,780 + MPMX20_01143 0.36 -0.9
1,205,788 - MPMX20_01143 0.37 -0.3
1,205,863 + MPMX20_01143 0.44 +0.0
1,205,939 + MPMX20_01143 0.51 +1.5
1,205,978 - MPMX20_01143 0.54 +0.6
1,205,995 - MPMX20_01143 0.56 +0.7
1,206,082 - MPMX20_01143 0.63 -0.7
1,206,141 + MPMX20_01143 0.69 +1.6
1,206,166 + MPMX20_01143 0.71 -0.1
1,206,166 + MPMX20_01143 0.71 -0.3
1,206,166 + MPMX20_01143 0.71 +0.2
1,206,174 - MPMX20_01143 0.71 -0.2
1,206,174 - MPMX20_01143 0.71 -1.2
1,206,212 + MPMX20_01143 0.75 +0.4
1,206,237 - MPMX20_01143 0.77 -0.7
1,206,239 + MPMX20_01143 0.77 -0.5
1,206,242 - MPMX20_01143 0.78 +0.1
1,206,283 + MPMX20_01143 0.81 -1.0
1,206,336 - MPMX20_01143 0.86 +2.0
1,206,362 - MPMX20_01143 0.88 +1.4
1,206,390 + -0.1
1,206,393 - +0.3
1,206,393 - +0.5

Or see this region's nucleotide sequence