Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04474

Experiment: L-Glutamic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04473 and MPMX20_04474 are separated by 170 nucleotidesMPMX20_04474 and MPMX20_04475 are separated by 507 nucleotidesMPMX20_04475 and MPMX20_04476 are separated by 44 nucleotidesMPMX20_04476 and MPMX20_04477 are separated by 21 nucleotidesMPMX20_04477 and MPMX20_04478 are separated by 67 nucleotides MPMX20_04473: MPMX20_04473 - Protein HemY, at 4,678,500 to 4,679,699 _04473 MPMX20_04474: MPMX20_04474 - hypothetical protein, at 4,679,870 to 4,681,081 _04474 MPMX20_04475: MPMX20_04475 - tRNA-Pro, at 4,681,589 to 4,681,665 _04475 MPMX20_04476: MPMX20_04476 - tRNA-Leu, at 4,681,710 to 4,681,796 _04476 MPMX20_04477: MPMX20_04477 - tRNA-His, at 4,681,818 to 4,681,893 _04477 MPMX20_04478: MPMX20_04478 - tRNA-Arg, at 4,681,961 to 4,682,037 _04478 Position (kb) 4679 4680 4681 4682Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4678.896 kb on + strand, within MPMX20_04473at 4678.896 kb on + strand, within MPMX20_04473at 4678.904 kb on - strand, within MPMX20_04473at 4678.967 kb on + strand, within MPMX20_04473at 4679.044 kb on - strand, within MPMX20_04473at 4679.064 kb on - strand, within MPMX20_04473at 4679.064 kb on - strand, within MPMX20_04473at 4679.143 kb on + strand, within MPMX20_04473at 4679.146 kb on - strand, within MPMX20_04473at 4679.194 kb on + strand, within MPMX20_04473at 4679.241 kb on + strand, within MPMX20_04473at 4679.321 kb on - strand, within MPMX20_04473at 4679.326 kb on - strand, within MPMX20_04473at 4679.343 kb on + strand, within MPMX20_04473at 4679.348 kb on + strand, within MPMX20_04473at 4679.363 kb on - strand, within MPMX20_04473at 4679.378 kb on + strand, within MPMX20_04473at 4679.393 kb on + strand, within MPMX20_04473at 4679.420 kb on + strand, within MPMX20_04473at 4679.420 kb on - strand, within MPMX20_04473at 4679.433 kb on - strand, within MPMX20_04473at 4679.459 kb on + strand, within MPMX20_04473at 4679.459 kb on + strand, within MPMX20_04473at 4679.467 kb on - strand, within MPMX20_04473at 4679.467 kb on - strand, within MPMX20_04473at 4679.479 kb on + strand, within MPMX20_04473at 4679.484 kb on + strand, within MPMX20_04473at 4679.492 kb on - strand, within MPMX20_04473at 4679.494 kb on - strand, within MPMX20_04473at 4679.621 kb on + strandat 4679.621 kb on + strandat 4679.626 kb on + strandat 4679.626 kb on + strandat 4679.628 kb on + strandat 4679.663 kb on + strandat 4679.663 kb on + strandat 4679.718 kb on - strandat 4679.718 kb on - strandat 4679.754 kb on - strandat 4679.939 kb on + strandat 4679.940 kb on - strandat 4680.002 kb on + strand, within MPMX20_04474at 4680.006 kb on + strand, within MPMX20_04474at 4680.032 kb on - strand, within MPMX20_04474at 4680.093 kb on + strand, within MPMX20_04474at 4680.148 kb on + strand, within MPMX20_04474at 4680.157 kb on - strand, within MPMX20_04474at 4680.184 kb on + strand, within MPMX20_04474at 4680.234 kb on - strand, within MPMX20_04474at 4680.234 kb on - strand, within MPMX20_04474at 4680.248 kb on + strand, within MPMX20_04474at 4680.251 kb on - strand, within MPMX20_04474at 4680.257 kb on - strand, within MPMX20_04474at 4680.282 kb on + strand, within MPMX20_04474at 4680.282 kb on + strand, within MPMX20_04474at 4680.471 kb on + strand, within MPMX20_04474at 4680.506 kb on + strand, within MPMX20_04474at 4680.529 kb on - strand, within MPMX20_04474at 4680.690 kb on - strand, within MPMX20_04474at 4680.698 kb on - strand, within MPMX20_04474at 4680.831 kb on - strand, within MPMX20_04474at 4680.845 kb on - strand, within MPMX20_04474at 4680.850 kb on - strand, within MPMX20_04474at 4680.914 kb on + strand, within MPMX20_04474at 4680.942 kb on + strand, within MPMX20_04474at 4680.995 kb on + strandat 4681.005 kb on + strandat 4681.038 kb on + strandat 4681.050 kb on - strandat 4681.057 kb on + strandat 4681.060 kb on + strandat 4681.065 kb on + strandat 4681.065 kb on - strandat 4681.165 kb on - strandat 4681.280 kb on - strandat 4681.283 kb on - strandat 4681.393 kb on - strandat 4681.502 kb on + strandat 4681.588 kb on - strandat 4681.676 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (C)
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4,678,896 + MPMX20_04473 0.33 -0.3
4,678,896 + MPMX20_04473 0.33 -0.3
4,678,904 - MPMX20_04473 0.34 -2.2
4,678,967 + MPMX20_04473 0.39 +0.6
4,679,044 - MPMX20_04473 0.45 -2.7
4,679,064 - MPMX20_04473 0.47 +0.7
4,679,064 - MPMX20_04473 0.47 +1.9
4,679,143 + MPMX20_04473 0.54 -1.6
4,679,146 - MPMX20_04473 0.54 +0.7
4,679,194 + MPMX20_04473 0.58 -0.1
4,679,241 + MPMX20_04473 0.62 -0.2
4,679,321 - MPMX20_04473 0.68 -0.3
4,679,326 - MPMX20_04473 0.69 -1.2
4,679,343 + MPMX20_04473 0.70 +0.2
4,679,348 + MPMX20_04473 0.71 -0.2
4,679,363 - MPMX20_04473 0.72 -0.7
4,679,378 + MPMX20_04473 0.73 +1.0
4,679,393 + MPMX20_04473 0.74 -1.0
4,679,420 + MPMX20_04473 0.77 -0.9
4,679,420 - MPMX20_04473 0.77 -0.7
4,679,433 - MPMX20_04473 0.78 +1.9
4,679,459 + MPMX20_04473 0.80 -1.6
4,679,459 + MPMX20_04473 0.80 +3.5
4,679,467 - MPMX20_04473 0.81 +0.0
4,679,467 - MPMX20_04473 0.81 -1.5
4,679,479 + MPMX20_04473 0.82 +0.5
4,679,484 + MPMX20_04473 0.82 -0.8
4,679,492 - MPMX20_04473 0.83 +0.2
4,679,494 - MPMX20_04473 0.83 -0.6
4,679,621 + -1.3
4,679,621 + +0.8
4,679,626 + +0.3
4,679,626 + -1.4
4,679,628 + +0.2
4,679,663 + -0.1
4,679,663 + +0.8
4,679,718 - +0.6
4,679,718 - +0.9
4,679,754 - -0.1
4,679,939 + +1.0
4,679,940 - -0.2
4,680,002 + MPMX20_04474 0.11 +1.1
4,680,006 + MPMX20_04474 0.11 +0.1
4,680,032 - MPMX20_04474 0.13 +0.6
4,680,093 + MPMX20_04474 0.18 -0.3
4,680,148 + MPMX20_04474 0.23 +1.0
4,680,157 - MPMX20_04474 0.24 -0.3
4,680,184 + MPMX20_04474 0.26 -0.4
4,680,234 - MPMX20_04474 0.30 +0.9
4,680,234 - MPMX20_04474 0.30 +0.2
4,680,248 + MPMX20_04474 0.31 +0.8
4,680,251 - MPMX20_04474 0.31 +0.8
4,680,257 - MPMX20_04474 0.32 +0.1
4,680,282 + MPMX20_04474 0.34 +0.1
4,680,282 + MPMX20_04474 0.34 +1.3
4,680,471 + MPMX20_04474 0.50 -0.2
4,680,506 + MPMX20_04474 0.52 +0.3
4,680,529 - MPMX20_04474 0.54 +0.7
4,680,690 - MPMX20_04474 0.68 -0.0
4,680,698 - MPMX20_04474 0.68 +0.4
4,680,831 - MPMX20_04474 0.79 -0.5
4,680,845 - MPMX20_04474 0.80 -0.3
4,680,850 - MPMX20_04474 0.81 +1.4
4,680,914 + MPMX20_04474 0.86 -0.1
4,680,942 + MPMX20_04474 0.88 -0.5
4,680,995 + +0.2
4,681,005 + +1.8
4,681,038 + +0.5
4,681,050 - +0.6
4,681,057 + -0.1
4,681,060 + -0.7
4,681,065 + +1.2
4,681,065 - +0.1
4,681,165 - +0.5
4,681,280 - -0.9
4,681,283 - -0.6
4,681,393 - -0.3
4,681,502 + +1.3
4,681,588 - -0.6
4,681,676 - -0.8

Or see this region's nucleotide sequence