Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04273 and MPMX20_04274 overlap by 8 nucleotides MPMX20_04274 and MPMX20_04275 overlap by 8 nucleotides MPMX20_04275 and MPMX20_04276 are separated by 41 nucleotides
MPMX20_04273: MPMX20_04273 - Tryptophan--tRNA ligase, at 4,455,935 to 4,456,939
_04273
MPMX20_04274: MPMX20_04274 - Phosphoglycolate phosphatase, at 4,456,932 to 4,457,693
_04274
MPMX20_04275: MPMX20_04275 - Ribulose-phosphate 3-epimerase, at 4,457,686 to 4,458,363
_04275
MPMX20_04276: MPMX20_04276 - DNA adenine methylase, at 4,458,405 to 4,459,217
_04276
Position (kb)
4456
4457
4458 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4455.932 kb on + strand at 4455.940 kb on - strand at 4455.972 kb on + strand at 4456.076 kb on - strand, within MPMX20_04273 at 4456.091 kb on + strand, within MPMX20_04273 at 4456.116 kb on + strand, within MPMX20_04273 at 4456.156 kb on - strand, within MPMX20_04273 at 4456.177 kb on - strand, within MPMX20_04273 at 4456.177 kb on - strand, within MPMX20_04273 at 4456.177 kb on - strand, within MPMX20_04273 at 4456.204 kb on + strand, within MPMX20_04273 at 4456.218 kb on + strand, within MPMX20_04273 at 4456.223 kb on + strand, within MPMX20_04273 at 4456.362 kb on - strand, within MPMX20_04273 at 4456.375 kb on - strand, within MPMX20_04273 at 4456.420 kb on - strand, within MPMX20_04273 at 4456.431 kb on + strand, within MPMX20_04273 at 4456.431 kb on + strand, within MPMX20_04273 at 4456.439 kb on - strand, within MPMX20_04273 at 4456.474 kb on + strand, within MPMX20_04273 at 4456.526 kb on - strand, within MPMX20_04273 at 4456.526 kb on - strand, within MPMX20_04273 at 4456.544 kb on + strand, within MPMX20_04273 at 4456.544 kb on + strand, within MPMX20_04273 at 4456.552 kb on - strand, within MPMX20_04273 at 4456.562 kb on + strand, within MPMX20_04273 at 4456.572 kb on + strand, within MPMX20_04273 at 4456.580 kb on - strand, within MPMX20_04273 at 4456.652 kb on + strand, within MPMX20_04273 at 4456.660 kb on - strand, within MPMX20_04273 at 4456.672 kb on - strand, within MPMX20_04273 at 4456.752 kb on - strand, within MPMX20_04273 at 4456.772 kb on - strand, within MPMX20_04273 at 4456.872 kb on + strand at 4456.872 kb on + strand at 4456.872 kb on + strand at 4456.880 kb on - strand at 4456.880 kb on - strand at 4456.892 kb on + strand at 4456.907 kb on - strand at 4456.924 kb on - strand at 4456.964 kb on + strand at 4457.027 kb on + strand, within MPMX20_04274 at 4457.122 kb on + strand, within MPMX20_04274 at 4457.127 kb on + strand, within MPMX20_04274 at 4457.177 kb on + strand, within MPMX20_04274 at 4457.196 kb on + strand, within MPMX20_04274 at 4457.252 kb on - strand, within MPMX20_04274 at 4457.335 kb on - strand, within MPMX20_04274 at 4457.359 kb on + strand, within MPMX20_04274 at 4457.418 kb on - strand, within MPMX20_04274 at 4457.457 kb on + strand, within MPMX20_04274 at 4457.457 kb on + strand, within MPMX20_04274 at 4457.457 kb on + strand, within MPMX20_04274 at 4457.458 kb on + strand, within MPMX20_04274 at 4457.466 kb on - strand, within MPMX20_04274 at 4457.466 kb on - strand, within MPMX20_04274 at 4457.466 kb on - strand, within MPMX20_04274 at 4457.582 kb on + strand, within MPMX20_04274 at 4457.582 kb on + strand, within MPMX20_04274 at 4457.582 kb on + strand, within MPMX20_04274 at 4457.590 kb on + strand, within MPMX20_04274 at 4457.590 kb on - strand, within MPMX20_04274 at 4457.590 kb on - strand, within MPMX20_04274 at 4457.606 kb on + strand, within MPMX20_04274 at 4457.616 kb on + strand, within MPMX20_04274 at 4457.616 kb on + strand, within MPMX20_04274 at 4457.616 kb on + strand, within MPMX20_04274 at 4457.624 kb on - strand at 4457.634 kb on + strand at 4457.693 kb on + strand at 4457.760 kb on - strand, within MPMX20_04275 at 4457.784 kb on - strand, within MPMX20_04275 at 4457.851 kb on + strand, within MPMX20_04275 at 4457.995 kb on - strand, within MPMX20_04275 at 4458.049 kb on + strand, within MPMX20_04275 at 4458.070 kb on - strand, within MPMX20_04275 at 4458.072 kb on + strand, within MPMX20_04275 at 4458.210 kb on + strand, within MPMX20_04275 at 4458.244 kb on - strand, within MPMX20_04275 at 4458.301 kb on + strand at 4458.309 kb on - strand at 4458.411 kb on - strand at 4458.411 kb on - strand at 4458.411 kb on - strand at 4458.502 kb on + strand, within MPMX20_04276 at 4458.521 kb on + strand, within MPMX20_04276 at 4458.529 kb on - strand, within MPMX20_04276 at 4458.600 kb on - strand, within MPMX20_04276 at 4458.619 kb on - strand, within MPMX20_04276 at 4458.627 kb on + strand, within MPMX20_04276 at 4458.654 kb on + strand, within MPMX20_04276 at 4458.682 kb on - strand, within MPMX20_04276
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 4,455,932 + -0.7 4,455,940 - -0.7 4,455,972 + -1.1 4,456,076 - MPMX20_04273 0.14 +1.0 4,456,091 + MPMX20_04273 0.16 -1.1 4,456,116 + MPMX20_04273 0.18 -1.5 4,456,156 - MPMX20_04273 0.22 +0.4 4,456,177 - MPMX20_04273 0.24 +0.1 4,456,177 - MPMX20_04273 0.24 -0.5 4,456,177 - MPMX20_04273 0.24 +1.0 4,456,204 + MPMX20_04273 0.27 -0.6 4,456,218 + MPMX20_04273 0.28 +0.6 4,456,223 + MPMX20_04273 0.29 -0.2 4,456,362 - MPMX20_04273 0.42 +0.1 4,456,375 - MPMX20_04273 0.44 -0.1 4,456,420 - MPMX20_04273 0.48 -1.1 4,456,431 + MPMX20_04273 0.49 -1.7 4,456,431 + MPMX20_04273 0.49 -0.6 4,456,439 - MPMX20_04273 0.50 -0.6 4,456,474 + MPMX20_04273 0.54 +0.0 4,456,526 - MPMX20_04273 0.59 +1.5 4,456,526 - MPMX20_04273 0.59 -0.9 4,456,544 + MPMX20_04273 0.61 -0.8 4,456,544 + MPMX20_04273 0.61 -0.3 4,456,552 - MPMX20_04273 0.61 -0.1 4,456,562 + MPMX20_04273 0.62 -1.4 4,456,572 + MPMX20_04273 0.63 -1.1 4,456,580 - MPMX20_04273 0.64 +0.2 4,456,652 + MPMX20_04273 0.71 -0.5 4,456,660 - MPMX20_04273 0.72 -1.7 4,456,672 - MPMX20_04273 0.73 +0.2 4,456,752 - MPMX20_04273 0.81 -0.8 4,456,772 - MPMX20_04273 0.83 -0.1 4,456,872 + -0.1 4,456,872 + -1.0 4,456,872 + +0.5 4,456,880 - -0.7 4,456,880 - -2.4 4,456,892 + -1.0 4,456,907 - -2.3 4,456,924 - -1.1 4,456,964 + -0.5 4,457,027 + MPMX20_04274 0.12 +0.1 4,457,122 + MPMX20_04274 0.25 -0.1 4,457,127 + MPMX20_04274 0.26 +0.7 4,457,177 + MPMX20_04274 0.32 -0.5 4,457,196 + MPMX20_04274 0.35 +0.9 4,457,252 - MPMX20_04274 0.42 -0.1 4,457,335 - MPMX20_04274 0.53 +0.8 4,457,359 + MPMX20_04274 0.56 -0.3 4,457,418 - MPMX20_04274 0.64 -1.0 4,457,457 + MPMX20_04274 0.69 +0.3 4,457,457 + MPMX20_04274 0.69 -0.9 4,457,457 + MPMX20_04274 0.69 -1.6 4,457,458 + MPMX20_04274 0.69 -0.1 4,457,466 - MPMX20_04274 0.70 +0.3 4,457,466 - MPMX20_04274 0.70 -0.8 4,457,466 - MPMX20_04274 0.70 +0.6 4,457,582 + MPMX20_04274 0.85 -1.7 4,457,582 + MPMX20_04274 0.85 -0.3 4,457,582 + MPMX20_04274 0.85 +1.6 4,457,590 + MPMX20_04274 0.86 -0.3 4,457,590 - MPMX20_04274 0.86 +0.0 4,457,590 - MPMX20_04274 0.86 +0.1 4,457,606 + MPMX20_04274 0.88 -0.1 4,457,616 + MPMX20_04274 0.90 +0.3 4,457,616 + MPMX20_04274 0.90 +0.3 4,457,616 + MPMX20_04274 0.90 +0.1 4,457,624 - -1.2 4,457,634 + +0.1 4,457,693 + -1.6 4,457,760 - MPMX20_04275 0.11 -1.5 4,457,784 - MPMX20_04275 0.14 -1.7 4,457,851 + MPMX20_04275 0.24 -1.1 4,457,995 - MPMX20_04275 0.46 -1.5 4,458,049 + MPMX20_04275 0.54 -1.1 4,458,070 - MPMX20_04275 0.57 -0.5 4,458,072 + MPMX20_04275 0.57 -0.5 4,458,210 + MPMX20_04275 0.77 -1.1 4,458,244 - MPMX20_04275 0.82 -2.9 4,458,301 + -2.1 4,458,309 - -0.1 4,458,411 - +1.0 4,458,411 - +0.2 4,458,411 - -0.1 4,458,502 + MPMX20_04276 0.12 -2.1 4,458,521 + MPMX20_04276 0.14 -0.7 4,458,529 - MPMX20_04276 0.15 +2.3 4,458,600 - MPMX20_04276 0.24 -1.5 4,458,619 - MPMX20_04276 0.26 -3.5 4,458,627 + MPMX20_04276 0.27 +0.3 4,458,654 + MPMX20_04276 0.31 -1.6 4,458,682 - MPMX20_04276 0.34 -0.7
Or see this region's nucleotide sequence