Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03621 and MPMX20_03622 overlap by 11 nucleotides MPMX20_03622 and MPMX20_03623 are separated by 171 nucleotides MPMX20_03623 and MPMX20_03624 overlap by 4 nucleotides MPMX20_03624 and MPMX20_03625 are separated by 107 nucleotides
MPMX20_03621: MPMX20_03621 - Phenolic acid decarboxylase, at 3,811,087 to 3,812,514
_03621
MPMX20_03622: MPMX20_03622 - putative UbiX-like flavin prenyltransferase, at 3,812,504 to 3,813,106
_03622
MPMX20_03623: MPMX20_03623 - Transcriptional regulator HosA, at 3,813,278 to 3,813,685
_03623
MPMX20_03624: MPMX20_03624 - HTH-type transcriptional regulator DmlR, at 3,813,682 to 3,814,569
_03624
MPMX20_03625: MPMX20_03625 - Putative multidrug resistance protein MdtD, at 3,814,677 to 3,815,885
_03625
Position (kb)
3813
3814 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3812.280 kb on + strand, within MPMX20_03621 at 3812.296 kb on - strand, within MPMX20_03621 at 3812.328 kb on - strand, within MPMX20_03621 at 3812.331 kb on + strand, within MPMX20_03621 at 3812.341 kb on + strand, within MPMX20_03621 at 3812.401 kb on + strand at 3812.480 kb on - strand at 3812.492 kb on - strand at 3812.502 kb on - strand at 3812.623 kb on - strand, within MPMX20_03622 at 3812.648 kb on + strand, within MPMX20_03622 at 3812.687 kb on + strand, within MPMX20_03622 at 3812.732 kb on - strand, within MPMX20_03622 at 3812.793 kb on + strand, within MPMX20_03622 at 3812.803 kb on - strand, within MPMX20_03622 at 3812.803 kb on - strand, within MPMX20_03622 at 3812.818 kb on - strand, within MPMX20_03622 at 3812.818 kb on - strand, within MPMX20_03622 at 3812.943 kb on + strand, within MPMX20_03622 at 3812.951 kb on - strand, within MPMX20_03622 at 3812.951 kb on - strand, within MPMX20_03622 at 3812.966 kb on - strand, within MPMX20_03622 at 3812.966 kb on - strand, within MPMX20_03622 at 3813.060 kb on - strand at 3813.306 kb on + strand at 3813.391 kb on - strand, within MPMX20_03623 at 3813.420 kb on + strand, within MPMX20_03623 at 3813.447 kb on + strand, within MPMX20_03623 at 3813.455 kb on - strand, within MPMX20_03623 at 3813.499 kb on + strand, within MPMX20_03623 at 3813.507 kb on - strand, within MPMX20_03623 at 3813.579 kb on + strand, within MPMX20_03623 at 3813.587 kb on - strand, within MPMX20_03623 at 3813.587 kb on - strand, within MPMX20_03623 at 3813.587 kb on - strand, within MPMX20_03623 at 3813.587 kb on - strand, within MPMX20_03623 at 3813.608 kb on - strand, within MPMX20_03623 at 3813.769 kb on - strand at 3813.781 kb on + strand, within MPMX20_03624 at 3813.781 kb on + strand, within MPMX20_03624 at 3813.782 kb on - strand, within MPMX20_03624 at 3813.789 kb on - strand, within MPMX20_03624 at 3813.860 kb on - strand, within MPMX20_03624 at 3813.881 kb on + strand, within MPMX20_03624 at 3813.899 kb on - strand, within MPMX20_03624 at 3813.899 kb on - strand, within MPMX20_03624 at 3814.007 kb on - strand, within MPMX20_03624 at 3814.034 kb on - strand, within MPMX20_03624 at 3814.209 kb on + strand, within MPMX20_03624 at 3814.217 kb on - strand, within MPMX20_03624 at 3814.218 kb on - strand, within MPMX20_03624 at 3814.229 kb on + strand, within MPMX20_03624 at 3814.420 kb on + strand, within MPMX20_03624 at 3814.436 kb on - strand, within MPMX20_03624 at 3814.442 kb on - strand, within MPMX20_03624 at 3814.469 kb on - strand, within MPMX20_03624 at 3814.488 kb on + strand at 3814.492 kb on + strand at 3814.543 kb on - strand at 3814.658 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 3,812,280 + MPMX20_03621 0.84 +0.0 3,812,296 - MPMX20_03621 0.85 -0.1 3,812,328 - MPMX20_03621 0.87 +0.5 3,812,331 + MPMX20_03621 0.87 -0.6 3,812,341 + MPMX20_03621 0.88 +0.0 3,812,401 + +1.0 3,812,480 - +0.4 3,812,492 - +0.1 3,812,502 - -2.1 3,812,623 - MPMX20_03622 0.20 -0.3 3,812,648 + MPMX20_03622 0.24 +0.3 3,812,687 + MPMX20_03622 0.30 +0.6 3,812,732 - MPMX20_03622 0.38 -0.9 3,812,793 + MPMX20_03622 0.48 -0.3 3,812,803 - MPMX20_03622 0.50 +3.1 3,812,803 - MPMX20_03622 0.50 -0.1 3,812,818 - MPMX20_03622 0.52 +0.9 3,812,818 - MPMX20_03622 0.52 -1.5 3,812,943 + MPMX20_03622 0.73 +0.8 3,812,951 - MPMX20_03622 0.74 -0.5 3,812,951 - MPMX20_03622 0.74 -0.0 3,812,966 - MPMX20_03622 0.77 +0.2 3,812,966 - MPMX20_03622 0.77 -0.5 3,813,060 - -0.5 3,813,306 + +0.3 3,813,391 - MPMX20_03623 0.28 -0.6 3,813,420 + MPMX20_03623 0.35 +0.4 3,813,447 + MPMX20_03623 0.41 +0.0 3,813,455 - MPMX20_03623 0.43 -0.6 3,813,499 + MPMX20_03623 0.54 +1.4 3,813,507 - MPMX20_03623 0.56 +0.6 3,813,579 + MPMX20_03623 0.74 -0.1 3,813,587 - MPMX20_03623 0.76 -0.0 3,813,587 - MPMX20_03623 0.76 -0.2 3,813,587 - MPMX20_03623 0.76 -0.6 3,813,587 - MPMX20_03623 0.76 -0.4 3,813,608 - MPMX20_03623 0.81 -1.0 3,813,769 - +0.7 3,813,781 + MPMX20_03624 0.11 +1.3 3,813,781 + MPMX20_03624 0.11 +0.5 3,813,782 - MPMX20_03624 0.11 +1.1 3,813,789 - MPMX20_03624 0.12 +0.3 3,813,860 - MPMX20_03624 0.20 -0.2 3,813,881 + MPMX20_03624 0.22 -0.2 3,813,899 - MPMX20_03624 0.24 +0.6 3,813,899 - MPMX20_03624 0.24 +0.2 3,814,007 - MPMX20_03624 0.37 -0.8 3,814,034 - MPMX20_03624 0.40 -0.6 3,814,209 + MPMX20_03624 0.59 +0.9 3,814,217 - MPMX20_03624 0.60 +0.6 3,814,218 - MPMX20_03624 0.60 -0.4 3,814,229 + MPMX20_03624 0.62 +0.5 3,814,420 + MPMX20_03624 0.83 +0.7 3,814,436 - MPMX20_03624 0.85 +1.2 3,814,442 - MPMX20_03624 0.86 +0.9 3,814,469 - MPMX20_03624 0.89 -0.3 3,814,488 + +0.3 3,814,492 + +1.3 3,814,543 - +0.9 3,814,658 - +0.1
Or see this region's nucleotide sequence