Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03478 and MPMX20_03479 are separated by 18 nucleotides MPMX20_03479 and MPMX20_03480 are separated by 190 nucleotides MPMX20_03480 and MPMX20_03481 are separated by 91 nucleotides
MPMX20_03478: MPMX20_03478 - Ribosome maturation factor RimM, at 3,667,956 to 3,668,492
_03478
MPMX20_03479: MPMX20_03479 - 30S ribosomal protein S16, at 3,668,511 to 3,668,759
_03479
MPMX20_03480: MPMX20_03480 - Signal recognition particle protein, at 3,668,950 to 3,670,311
_03480
MPMX20_03481: MPMX20_03481 - Inner membrane protein YpjD, at 3,670,403 to 3,671,269
_03481
Position (kb)
3668
3669
3670
3671 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3668.538 kb on - strand, within MPMX20_03479 at 3668.538 kb on - strand, within MPMX20_03479 at 3668.538 kb on - strand, within MPMX20_03479 at 3668.900 kb on - strand at 3670.361 kb on - strand at 3670.382 kb on + strand at 3670.384 kb on - strand at 3670.418 kb on - strand at 3670.425 kb on - strand at 3670.431 kb on + strand at 3670.431 kb on + strand at 3670.431 kb on + strand at 3670.439 kb on - strand at 3670.439 kb on - strand at 3670.439 kb on - strand at 3670.521 kb on + strand, within MPMX20_03481 at 3670.536 kb on + strand, within MPMX20_03481 at 3670.536 kb on + strand, within MPMX20_03481 at 3670.536 kb on + strand, within MPMX20_03481 at 3670.539 kb on - strand, within MPMX20_03481 at 3670.544 kb on - strand, within MPMX20_03481 at 3670.670 kb on - strand, within MPMX20_03481 at 3670.754 kb on - strand, within MPMX20_03481 at 3670.771 kb on - strand, within MPMX20_03481 at 3670.771 kb on - strand, within MPMX20_03481 at 3670.780 kb on + strand, within MPMX20_03481 at 3670.780 kb on + strand, within MPMX20_03481 at 3670.793 kb on - strand, within MPMX20_03481 at 3670.793 kb on - strand, within MPMX20_03481 at 3670.824 kb on - strand, within MPMX20_03481 at 3670.855 kb on - strand, within MPMX20_03481 at 3670.865 kb on + strand, within MPMX20_03481 at 3670.875 kb on - strand, within MPMX20_03481 at 3670.889 kb on - strand, within MPMX20_03481 at 3670.908 kb on + strand, within MPMX20_03481 at 3670.908 kb on + strand, within MPMX20_03481 at 3670.929 kb on - strand, within MPMX20_03481 at 3670.929 kb on - strand, within MPMX20_03481 at 3670.959 kb on + strand, within MPMX20_03481 at 3670.984 kb on + strand, within MPMX20_03481 at 3670.996 kb on + strand, within MPMX20_03481 at 3671.020 kb on + strand, within MPMX20_03481 at 3671.025 kb on + strand, within MPMX20_03481 at 3671.028 kb on - strand, within MPMX20_03481 at 3671.028 kb on - strand, within MPMX20_03481 at 3671.040 kb on + strand, within MPMX20_03481 at 3671.040 kb on + strand, within MPMX20_03481 at 3671.040 kb on + strand, within MPMX20_03481 at 3671.040 kb on + strand, within MPMX20_03481 at 3671.052 kb on + strand, within MPMX20_03481 at 3671.057 kb on + strand, within MPMX20_03481 at 3671.057 kb on + strand, within MPMX20_03481 at 3671.058 kb on - strand, within MPMX20_03481 at 3671.113 kb on + strand, within MPMX20_03481 at 3671.144 kb on - strand, within MPMX20_03481 at 3671.202 kb on - strand at 3671.286 kb on + strand at 3671.299 kb on + strand at 3671.304 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 3,668,538 - MPMX20_03479 0.11 -2.2 3,668,538 - MPMX20_03479 0.11 +0.3 3,668,538 - MPMX20_03479 0.11 -0.3 3,668,900 - -2.0 3,670,361 - +0.4 3,670,382 + +0.1 3,670,384 - +0.2 3,670,418 - +1.3 3,670,425 - -0.7 3,670,431 + -0.3 3,670,431 + +0.4 3,670,431 + -1.0 3,670,439 - -0.4 3,670,439 - +0.6 3,670,439 - -0.4 3,670,521 + MPMX20_03481 0.14 +0.2 3,670,536 + MPMX20_03481 0.15 -2.4 3,670,536 + MPMX20_03481 0.15 -1.3 3,670,536 + MPMX20_03481 0.15 +0.9 3,670,539 - MPMX20_03481 0.16 -1.5 3,670,544 - MPMX20_03481 0.16 -0.3 3,670,670 - MPMX20_03481 0.31 -0.3 3,670,754 - MPMX20_03481 0.40 +0.0 3,670,771 - MPMX20_03481 0.42 -1.4 3,670,771 - MPMX20_03481 0.42 -3.3 3,670,780 + MPMX20_03481 0.43 -1.1 3,670,780 + MPMX20_03481 0.43 -3.9 3,670,793 - MPMX20_03481 0.45 -0.6 3,670,793 - MPMX20_03481 0.45 -0.3 3,670,824 - MPMX20_03481 0.49 +0.2 3,670,855 - MPMX20_03481 0.52 -1.1 3,670,865 + MPMX20_03481 0.53 -0.4 3,670,875 - MPMX20_03481 0.54 +0.2 3,670,889 - MPMX20_03481 0.56 -0.5 3,670,908 + MPMX20_03481 0.58 -0.1 3,670,908 + MPMX20_03481 0.58 -2.8 3,670,929 - MPMX20_03481 0.61 -0.6 3,670,929 - MPMX20_03481 0.61 +1.7 3,670,959 + MPMX20_03481 0.64 -1.2 3,670,984 + MPMX20_03481 0.67 -1.4 3,670,996 + MPMX20_03481 0.68 -1.9 3,671,020 + MPMX20_03481 0.71 -1.5 3,671,025 + MPMX20_03481 0.72 -1.7 3,671,028 - MPMX20_03481 0.72 -2.8 3,671,028 - MPMX20_03481 0.72 -1.0 3,671,040 + MPMX20_03481 0.73 +0.3 3,671,040 + MPMX20_03481 0.73 -1.5 3,671,040 + MPMX20_03481 0.73 -1.9 3,671,040 + MPMX20_03481 0.73 +0.1 3,671,052 + MPMX20_03481 0.75 -1.8 3,671,057 + MPMX20_03481 0.75 -0.6 3,671,057 + MPMX20_03481 0.75 -0.4 3,671,058 - MPMX20_03481 0.76 -1.9 3,671,113 + MPMX20_03481 0.82 +0.5 3,671,144 - MPMX20_03481 0.85 -1.5 3,671,202 - +0.1 3,671,286 + +0.7 3,671,299 + -0.0 3,671,304 + -0.6
Or see this region's nucleotide sequence