Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03418

Experiment: L-Glutamic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03417 and MPMX20_03418 are separated by 0 nucleotidesMPMX20_03418 and MPMX20_03419 are separated by 173 nucleotidesMPMX20_03419 and MPMX20_03420 are separated by 54 nucleotides MPMX20_03417: MPMX20_03417 - hypothetical protein, at 3,601,618 to 3,602,895 _03417 MPMX20_03418: MPMX20_03418 - putative 3-phenylpropionic acid transporter, at 3,602,896 to 3,604,035 _03418 MPMX20_03419: MPMX20_03419 - Inner membrane protein YphA, at 3,604,209 to 3,604,631 _03419 MPMX20_03420: MPMX20_03420 - Serine hydroxymethyltransferase, at 3,604,686 to 3,605,939 _03420 Position (kb) 3602 3603 3604 3605Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 3601.896 kb on + strand, within MPMX20_03417at 3601.898 kb on - strand, within MPMX20_03417at 3601.906 kb on - strand, within MPMX20_03417at 3601.930 kb on + strand, within MPMX20_03417at 3601.940 kb on - strand, within MPMX20_03417at 3601.940 kb on - strand, within MPMX20_03417at 3601.968 kb on + strand, within MPMX20_03417at 3601.981 kb on + strand, within MPMX20_03417at 3602.011 kb on + strand, within MPMX20_03417at 3602.088 kb on + strand, within MPMX20_03417at 3602.096 kb on - strand, within MPMX20_03417at 3602.140 kb on - strand, within MPMX20_03417at 3602.142 kb on + strand, within MPMX20_03417at 3602.142 kb on + strand, within MPMX20_03417at 3602.150 kb on - strand, within MPMX20_03417at 3602.256 kb on + strand, within MPMX20_03417at 3602.259 kb on + strand, within MPMX20_03417at 3602.259 kb on + strand, within MPMX20_03417at 3602.271 kb on + strand, within MPMX20_03417at 3602.271 kb on + strand, within MPMX20_03417at 3602.284 kb on - strand, within MPMX20_03417at 3602.284 kb on - strand, within MPMX20_03417at 3602.285 kb on - strand, within MPMX20_03417at 3602.315 kb on - strand, within MPMX20_03417at 3602.332 kb on - strand, within MPMX20_03417at 3602.378 kb on + strand, within MPMX20_03417at 3602.378 kb on - strand, within MPMX20_03417at 3602.433 kb on - strand, within MPMX20_03417at 3602.477 kb on + strand, within MPMX20_03417at 3602.495 kb on - strand, within MPMX20_03417at 3602.569 kb on + strand, within MPMX20_03417at 3602.575 kb on + strand, within MPMX20_03417at 3602.646 kb on + strand, within MPMX20_03417at 3602.658 kb on + strand, within MPMX20_03417at 3602.737 kb on + strand, within MPMX20_03417at 3602.737 kb on + strand, within MPMX20_03417at 3602.745 kb on - strand, within MPMX20_03417at 3602.789 kb on + strandat 3602.789 kb on - strandat 3602.797 kb on - strandat 3602.797 kb on - strandat 3602.797 kb on - strandat 3602.814 kb on + strandat 3602.814 kb on + strandat 3602.993 kb on - strandat 3603.087 kb on + strand, within MPMX20_03418at 3603.095 kb on - strand, within MPMX20_03418at 3603.100 kb on - strand, within MPMX20_03418at 3603.198 kb on + strand, within MPMX20_03418at 3603.198 kb on + strand, within MPMX20_03418at 3603.204 kb on - strand, within MPMX20_03418at 3603.206 kb on - strand, within MPMX20_03418at 3603.206 kb on - strand, within MPMX20_03418at 3603.206 kb on - strand, within MPMX20_03418at 3603.240 kb on + strand, within MPMX20_03418at 3603.359 kb on + strand, within MPMX20_03418at 3603.478 kb on + strand, within MPMX20_03418at 3603.493 kb on - strand, within MPMX20_03418at 3603.547 kb on - strand, within MPMX20_03418at 3603.600 kb on + strand, within MPMX20_03418at 3603.600 kb on + strand, within MPMX20_03418at 3603.600 kb on + strand, within MPMX20_03418at 3603.608 kb on - strand, within MPMX20_03418at 3603.608 kb on - strand, within MPMX20_03418at 3603.608 kb on - strand, within MPMX20_03418at 3603.608 kb on - strand, within MPMX20_03418at 3603.654 kb on - strand, within MPMX20_03418at 3603.677 kb on + strand, within MPMX20_03418at 3603.689 kb on + strand, within MPMX20_03418at 3603.698 kb on + strand, within MPMX20_03418at 3603.723 kb on + strand, within MPMX20_03418at 3603.723 kb on + strand, within MPMX20_03418at 3603.785 kb on + strand, within MPMX20_03418at 3603.793 kb on - strand, within MPMX20_03418at 3603.796 kb on + strand, within MPMX20_03418at 3603.821 kb on + strand, within MPMX20_03418at 3603.896 kb on + strand, within MPMX20_03418at 3603.896 kb on + strand, within MPMX20_03418at 3603.939 kb on + strandat 3603.939 kb on + strandat 3603.944 kb on + strandat 3603.953 kb on + strandat 3603.998 kb on + strandat 3604.005 kb on + strandat 3604.005 kb on + strandat 3604.032 kb on - strandat 3604.041 kb on - strandat 3604.137 kb on + strandat 3604.145 kb on - strandat 3604.150 kb on - strandat 3604.150 kb on - strandat 3604.243 kb on + strandat 3604.243 kb on + strandat 3604.259 kb on - strand, within MPMX20_03419at 3604.267 kb on - strand, within MPMX20_03419at 3604.267 kb on - strand, within MPMX20_03419at 3604.306 kb on + strand, within MPMX20_03419at 3604.306 kb on + strand, within MPMX20_03419at 3604.306 kb on + strand, within MPMX20_03419at 3604.316 kb on + strand, within MPMX20_03419at 3604.322 kb on + strand, within MPMX20_03419at 3604.348 kb on - strand, within MPMX20_03419at 3604.355 kb on + strand, within MPMX20_03419at 3604.355 kb on + strand, within MPMX20_03419at 3604.355 kb on + strand, within MPMX20_03419at 3604.355 kb on + strand, within MPMX20_03419at 3604.355 kb on + strand, within MPMX20_03419at 3604.355 kb on + strand, within MPMX20_03419at 3604.355 kb on + strand, within MPMX20_03419at 3604.355 kb on + strand, within MPMX20_03419at 3604.355 kb on + strand, within MPMX20_03419at 3604.355 kb on + strand, within MPMX20_03419at 3604.355 kb on + strand, within MPMX20_03419at 3604.357 kb on + strand, within MPMX20_03419at 3604.360 kb on - strand, within MPMX20_03419at 3604.362 kb on + strand, within MPMX20_03419at 3604.363 kb on - strand, within MPMX20_03419at 3604.363 kb on - strand, within MPMX20_03419at 3604.363 kb on - strand, within MPMX20_03419at 3604.363 kb on - strand, within MPMX20_03419at 3604.363 kb on - strand, within MPMX20_03419at 3604.363 kb on - strand, within MPMX20_03419at 3604.363 kb on - strand, within MPMX20_03419at 3604.363 kb on - strand, within MPMX20_03419at 3604.369 kb on - strand, within MPMX20_03419at 3604.370 kb on - strand, within MPMX20_03419at 3604.394 kb on + strand, within MPMX20_03419at 3604.396 kb on + strand, within MPMX20_03419at 3604.401 kb on - strand, within MPMX20_03419at 3604.411 kb on + strand, within MPMX20_03419at 3604.445 kb on + strand, within MPMX20_03419at 3604.460 kb on - strand, within MPMX20_03419at 3604.460 kb on - strand, within MPMX20_03419at 3604.460 kb on - strand, within MPMX20_03419at 3604.465 kb on - strand, within MPMX20_03419at 3604.494 kb on + strand, within MPMX20_03419at 3604.499 kb on + strand, within MPMX20_03419at 3604.502 kb on + strand, within MPMX20_03419at 3604.504 kb on + strand, within MPMX20_03419at 3604.507 kb on - strand, within MPMX20_03419at 3604.519 kb on + strand, within MPMX20_03419at 3604.519 kb on + strand, within MPMX20_03419at 3604.544 kb on - strand, within MPMX20_03419at 3604.575 kb on + strand, within MPMX20_03419at 3604.615 kb on + strandat 3604.615 kb on + strandat 3604.615 kb on + strandat 3604.615 kb on + strandat 3604.618 kb on - strandat 3604.623 kb on - strandat 3604.623 kb on - strandat 3604.623 kb on - strandat 3604.623 kb on - strandat 3604.623 kb on - strandat 3604.623 kb on - strandat 3604.623 kb on - strandat 3604.625 kb on + strandat 3604.625 kb on + strandat 3604.625 kb on + strandat 3604.625 kb on + strandat 3604.633 kb on - strandat 3604.633 kb on - strandat 3604.633 kb on - strandat 3604.633 kb on - strandat 3604.633 kb on - strandat 3604.633 kb on - strandat 3604.633 kb on - strandat 3604.692 kb on - strandat 3604.697 kb on - strandat 3604.704 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (C)
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3,601,896 + MPMX20_03417 0.22 +2.0
3,601,898 - MPMX20_03417 0.22 +0.7
3,601,906 - MPMX20_03417 0.23 +1.2
3,601,930 + MPMX20_03417 0.24 +2.5
3,601,940 - MPMX20_03417 0.25 -0.7
3,601,940 - MPMX20_03417 0.25 +2.2
3,601,968 + MPMX20_03417 0.27 +2.2
3,601,981 + MPMX20_03417 0.28 +2.2
3,602,011 + MPMX20_03417 0.31 +2.3
3,602,088 + MPMX20_03417 0.37 +2.1
3,602,096 - MPMX20_03417 0.37 +2.1
3,602,140 - MPMX20_03417 0.41 +2.6
3,602,142 + MPMX20_03417 0.41 +1.4
3,602,142 + MPMX20_03417 0.41 +2.0
3,602,150 - MPMX20_03417 0.42 +2.2
3,602,256 + MPMX20_03417 0.50 +1.9
3,602,259 + MPMX20_03417 0.50 +2.4
3,602,259 + MPMX20_03417 0.50 +3.2
3,602,271 + MPMX20_03417 0.51 +2.9
3,602,271 + MPMX20_03417 0.51 +2.0
3,602,284 - MPMX20_03417 0.52 +3.1
3,602,284 - MPMX20_03417 0.52 +3.8
3,602,285 - MPMX20_03417 0.52 +1.9
3,602,315 - MPMX20_03417 0.55 +1.9
3,602,332 - MPMX20_03417 0.56 +1.4
3,602,378 + MPMX20_03417 0.59 +2.5
3,602,378 - MPMX20_03417 0.59 +0.9
3,602,433 - MPMX20_03417 0.64 +0.8
3,602,477 + MPMX20_03417 0.67 +2.8
3,602,495 - MPMX20_03417 0.69 +2.6
3,602,569 + MPMX20_03417 0.74 +2.6
3,602,575 + MPMX20_03417 0.75 +2.2
3,602,646 + MPMX20_03417 0.80 +2.4
3,602,658 + MPMX20_03417 0.81 +1.6
3,602,737 + MPMX20_03417 0.88 +2.6
3,602,737 + MPMX20_03417 0.88 +1.1
3,602,745 - MPMX20_03417 0.88 +2.8
3,602,789 + +2.0
3,602,789 - +0.9
3,602,797 - +2.0
3,602,797 - +1.6
3,602,797 - +2.1
3,602,814 + -0.1
3,602,814 + +1.9
3,602,993 - -1.8
3,603,087 + MPMX20_03418 0.17 -1.0
3,603,095 - MPMX20_03418 0.17 -0.9
3,603,100 - MPMX20_03418 0.18 +0.6
3,603,198 + MPMX20_03418 0.26 -1.7
3,603,198 + MPMX20_03418 0.26 -0.2
3,603,204 - MPMX20_03418 0.27 -2.1
3,603,206 - MPMX20_03418 0.27 -1.3
3,603,206 - MPMX20_03418 0.27 -0.2
3,603,206 - MPMX20_03418 0.27 -0.1
3,603,240 + MPMX20_03418 0.30 +0.5
3,603,359 + MPMX20_03418 0.41 -0.1
3,603,478 + MPMX20_03418 0.51 -0.2
3,603,493 - MPMX20_03418 0.52 +1.6
3,603,547 - MPMX20_03418 0.57 -0.4
3,603,600 + MPMX20_03418 0.62 +0.5
3,603,600 + MPMX20_03418 0.62 +0.1
3,603,600 + MPMX20_03418 0.62 -0.3
3,603,608 - MPMX20_03418 0.62 -0.4
3,603,608 - MPMX20_03418 0.62 -0.7
3,603,608 - MPMX20_03418 0.62 -2.3
3,603,608 - MPMX20_03418 0.62 -0.7
3,603,654 - MPMX20_03418 0.66 -0.9
3,603,677 + MPMX20_03418 0.69 -0.7
3,603,689 + MPMX20_03418 0.70 -0.2
3,603,698 + MPMX20_03418 0.70 -0.8
3,603,723 + MPMX20_03418 0.73 -0.0
3,603,723 + MPMX20_03418 0.73 +1.4
3,603,785 + MPMX20_03418 0.78 +1.1
3,603,793 - MPMX20_03418 0.79 -0.2
3,603,796 + MPMX20_03418 0.79 -0.3
3,603,821 + MPMX20_03418 0.81 +0.1
3,603,896 + MPMX20_03418 0.88 +0.3
3,603,896 + MPMX20_03418 0.88 -0.7
3,603,939 + +0.4
3,603,939 + +0.9
3,603,944 + +1.2
3,603,953 + -1.2
3,603,998 + +0.6
3,604,005 + -0.5
3,604,005 + +0.6
3,604,032 - -0.5
3,604,041 - +0.2
3,604,137 + +0.6
3,604,145 - +0.2
3,604,150 - -2.3
3,604,150 - -0.5
3,604,243 + +0.7
3,604,243 + +0.7
3,604,259 - MPMX20_03419 0.12 -1.5
3,604,267 - MPMX20_03419 0.14 +0.5
3,604,267 - MPMX20_03419 0.14 +0.8
3,604,306 + MPMX20_03419 0.23 +1.1
3,604,306 + MPMX20_03419 0.23 +0.5
3,604,306 + MPMX20_03419 0.23 +1.1
3,604,316 + MPMX20_03419 0.25 +1.5
3,604,322 + MPMX20_03419 0.27 +0.1
3,604,348 - MPMX20_03419 0.33 +0.7
3,604,355 + MPMX20_03419 0.35 +0.5
3,604,355 + MPMX20_03419 0.35 -0.3
3,604,355 + MPMX20_03419 0.35 -1.1
3,604,355 + MPMX20_03419 0.35 +1.3
3,604,355 + MPMX20_03419 0.35 +1.0
3,604,355 + MPMX20_03419 0.35 +0.2
3,604,355 + MPMX20_03419 0.35 -0.0
3,604,355 + MPMX20_03419 0.35 -1.5
3,604,355 + MPMX20_03419 0.35 +0.2
3,604,355 + MPMX20_03419 0.35 -0.1
3,604,355 + MPMX20_03419 0.35 +0.9
3,604,357 + MPMX20_03419 0.35 -0.7
3,604,360 - MPMX20_03419 0.36 -0.4
3,604,362 + MPMX20_03419 0.36 -1.7
3,604,363 - MPMX20_03419 0.36 +0.2
3,604,363 - MPMX20_03419 0.36 +1.1
3,604,363 - MPMX20_03419 0.36 +2.1
3,604,363 - MPMX20_03419 0.36 +0.6
3,604,363 - MPMX20_03419 0.36 +0.3
3,604,363 - MPMX20_03419 0.36 -0.1
3,604,363 - MPMX20_03419 0.36 +0.1
3,604,363 - MPMX20_03419 0.36 +0.3
3,604,369 - MPMX20_03419 0.38 -0.0
3,604,370 - MPMX20_03419 0.38 +0.3
3,604,394 + MPMX20_03419 0.44 -0.4
3,604,396 + MPMX20_03419 0.44 -0.4
3,604,401 - MPMX20_03419 0.45 +0.1
3,604,411 + MPMX20_03419 0.48 -0.5
3,604,445 + MPMX20_03419 0.56 +0.7
3,604,460 - MPMX20_03419 0.59 +0.3
3,604,460 - MPMX20_03419 0.59 -1.1
3,604,460 - MPMX20_03419 0.59 +2.6
3,604,465 - MPMX20_03419 0.61 -0.1
3,604,494 + MPMX20_03419 0.67 -1.0
3,604,499 + MPMX20_03419 0.69 -1.5
3,604,502 + MPMX20_03419 0.69 +0.5
3,604,504 + MPMX20_03419 0.70 +0.7
3,604,507 - MPMX20_03419 0.70 +0.1
3,604,519 + MPMX20_03419 0.73 +0.4
3,604,519 + MPMX20_03419 0.73 -0.7
3,604,544 - MPMX20_03419 0.79 +1.4
3,604,575 + MPMX20_03419 0.87 +0.6
3,604,615 + +0.1
3,604,615 + -0.8
3,604,615 + +0.7
3,604,615 + -2.4
3,604,618 - -1.1
3,604,623 - -0.5
3,604,623 - +0.0
3,604,623 - -0.1
3,604,623 - -0.2
3,604,623 - -0.3
3,604,623 - +1.6
3,604,623 - -1.9
3,604,625 + +0.2
3,604,625 + +1.1
3,604,625 + -0.7
3,604,625 + -3.6
3,604,633 - -0.3
3,604,633 - +0.6
3,604,633 - -0.9
3,604,633 - +0.1
3,604,633 - -0.7
3,604,633 - -0.4
3,604,633 - +0.7
3,604,692 - +0.4
3,604,697 - -1.3
3,604,704 - -0.7

Or see this region's nucleotide sequence