Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02758

Experiment: L-Glutamic (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_02757 and MPMX20_02758 are separated by 339 nucleotidesMPMX20_02758 and MPMX20_02759 are separated by 124 nucleotides MPMX20_02757: MPMX20_02757 - Glucose-6-phosphate 1-dehydrogenase, at 2,912,336 to 2,913,811 _02757 MPMX20_02758: MPMX20_02758 - HTH-type transcriptional regulator HexR, at 2,914,151 to 2,915,038 _02758 MPMX20_02759: MPMX20_02759 - Pyruvate kinase II, at 2,915,163 to 2,916,605 _02759 Position (kb) 2914 2915 2916Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2913.254 kb on + strand, within MPMX20_02757at 2913.262 kb on - strand, within MPMX20_02757at 2913.296 kb on + strand, within MPMX20_02757at 2913.355 kb on - strand, within MPMX20_02757at 2913.424 kb on - strand, within MPMX20_02757at 2913.535 kb on + strand, within MPMX20_02757at 2913.623 kb on + strand, within MPMX20_02757at 2913.672 kb on - strandat 2913.785 kb on + strandat 2913.793 kb on - strandat 2913.793 kb on - strandat 2913.834 kb on + strandat 2913.834 kb on + strandat 2913.878 kb on - strandat 2913.883 kb on - strandat 2913.888 kb on - strandat 2913.888 kb on - strandat 2913.893 kb on - strandat 2913.912 kb on + strandat 2913.920 kb on - strandat 2914.019 kb on + strandat 2914.020 kb on - strandat 2914.062 kb on + strandat 2914.063 kb on + strandat 2914.068 kb on + strandat 2914.076 kb on - strandat 2914.076 kb on - strandat 2914.102 kb on - strandat 2914.153 kb on - strandat 2914.159 kb on + strandat 2914.199 kb on + strandat 2914.268 kb on + strand, within MPMX20_02758at 2914.302 kb on - strand, within MPMX20_02758at 2914.447 kb on - strand, within MPMX20_02758at 2914.486 kb on + strand, within MPMX20_02758at 2914.491 kb on + strand, within MPMX20_02758at 2914.653 kb on + strand, within MPMX20_02758at 2914.675 kb on - strand, within MPMX20_02758at 2914.675 kb on - strand, within MPMX20_02758at 2914.711 kb on - strand, within MPMX20_02758at 2914.781 kb on + strand, within MPMX20_02758at 2914.833 kb on + strand, within MPMX20_02758at 2914.839 kb on + strand, within MPMX20_02758at 2914.841 kb on - strand, within MPMX20_02758at 2914.932 kb on - strand, within MPMX20_02758at 2914.934 kb on - strand, within MPMX20_02758at 2914.961 kb on + strandat 2914.961 kb on + strandat 2914.963 kb on + strandat 2914.980 kb on - strandat 2915.081 kb on - strandat 2915.087 kb on + strandat 2915.095 kb on - strandat 2915.111 kb on - strandat 2915.131 kb on + strandat 2915.138 kb on - strandat 2915.156 kb on + strandat 2915.162 kb on - strandat 2915.164 kb on - strandat 2915.175 kb on - strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.298 kb on - strandat 2915.452 kb on + strand, within MPMX20_02759at 2915.460 kb on - strand, within MPMX20_02759at 2915.462 kb on + strand, within MPMX20_02759at 2915.462 kb on + strand, within MPMX20_02759at 2915.462 kb on + strand, within MPMX20_02759at 2915.465 kb on - strand, within MPMX20_02759at 2915.636 kb on - strand, within MPMX20_02759at 2915.666 kb on + strand, within MPMX20_02759at 2915.681 kb on - strand, within MPMX20_02759at 2915.687 kb on - strand, within MPMX20_02759at 2915.777 kb on - strand, within MPMX20_02759at 2915.959 kb on + strand, within MPMX20_02759at 2915.972 kb on - strand, within MPMX20_02759

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (C)
remove
2,913,254 + MPMX20_02757 0.62 -0.9
2,913,262 - MPMX20_02757 0.63 +0.5
2,913,296 + MPMX20_02757 0.65 -0.5
2,913,355 - MPMX20_02757 0.69 +0.0
2,913,424 - MPMX20_02757 0.74 -1.9
2,913,535 + MPMX20_02757 0.81 -0.2
2,913,623 + MPMX20_02757 0.87 -0.8
2,913,672 - +1.1
2,913,785 + -0.9
2,913,793 - -1.0
2,913,793 - -1.7
2,913,834 + -1.0
2,913,834 + -0.7
2,913,878 - +1.4
2,913,883 - -0.1
2,913,888 - -1.6
2,913,888 - +0.7
2,913,893 - -0.9
2,913,912 + +0.5
2,913,920 - -0.3
2,914,019 + -0.1
2,914,020 - -0.6
2,914,062 + +0.9
2,914,063 + +0.1
2,914,068 + -0.0
2,914,076 - -2.3
2,914,076 - -0.6
2,914,102 - +2.1
2,914,153 - -1.1
2,914,159 + -2.0
2,914,199 + -3.1
2,914,268 + MPMX20_02758 0.13 -0.4
2,914,302 - MPMX20_02758 0.17 +0.1
2,914,447 - MPMX20_02758 0.33 -0.4
2,914,486 + MPMX20_02758 0.38 -0.7
2,914,491 + MPMX20_02758 0.38 -0.2
2,914,653 + MPMX20_02758 0.57 +0.1
2,914,675 - MPMX20_02758 0.59 -1.4
2,914,675 - MPMX20_02758 0.59 -2.5
2,914,711 - MPMX20_02758 0.63 -1.4
2,914,781 + MPMX20_02758 0.71 -0.4
2,914,833 + MPMX20_02758 0.77 +1.0
2,914,839 + MPMX20_02758 0.77 -0.6
2,914,841 - MPMX20_02758 0.78 -0.9
2,914,932 - MPMX20_02758 0.88 -1.2
2,914,934 - MPMX20_02758 0.88 -1.7
2,914,961 + -1.3
2,914,961 + +1.0
2,914,963 + +1.1
2,914,980 - -2.6
2,915,081 - +0.2
2,915,087 + -1.3
2,915,095 - -1.1
2,915,111 - +0.9
2,915,131 + -1.9
2,915,138 - -2.4
2,915,156 + -2.0
2,915,162 - -2.6
2,915,164 - -0.8
2,915,175 - -0.4
2,915,200 + -2.0
2,915,200 + -3.1
2,915,200 + -0.8
2,915,200 + -1.3
2,915,200 + -0.6
2,915,200 + -1.2
2,915,200 + -0.7
2,915,200 + -0.1
2,915,200 + -0.4
2,915,208 - +0.1
2,915,208 - -1.4
2,915,208 - -2.6
2,915,208 - -0.5
2,915,208 - -2.8
2,915,208 - -1.8
2,915,208 - -1.4
2,915,208 - -2.2
2,915,208 - -1.7
2,915,208 - -2.7
2,915,208 - -1.1
2,915,208 - -0.5
2,915,298 - -1.2
2,915,452 + MPMX20_02759 0.20 -0.8
2,915,460 - MPMX20_02759 0.21 -0.2
2,915,462 + MPMX20_02759 0.21 -2.5
2,915,462 + MPMX20_02759 0.21 -1.1
2,915,462 + MPMX20_02759 0.21 +0.6
2,915,465 - MPMX20_02759 0.21 -2.8
2,915,636 - MPMX20_02759 0.33 -1.9
2,915,666 + MPMX20_02759 0.35 -1.6
2,915,681 - MPMX20_02759 0.36 -0.4
2,915,687 - MPMX20_02759 0.36 -1.7
2,915,777 - MPMX20_02759 0.43 +0.8
2,915,959 + MPMX20_02759 0.55 -1.2
2,915,972 - MPMX20_02759 0.56 -0.7

Or see this region's nucleotide sequence