Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02405 and MPMX20_02406 are separated by 347 nucleotides MPMX20_02406 and MPMX20_02407 are separated by 71 nucleotides
MPMX20_02405: MPMX20_02405 - Aerotaxis receptor, at 2,536,712 to 2,538,265
_02405
MPMX20_02406: MPMX20_02406 - L-asparagine permease 2, at 2,538,613 to 2,540,109
_02406
MPMX20_02407: MPMX20_02407 - putative protein YncE, at 2,540,181 to 2,541,242
_02407
Position (kb)
2538
2539
2540
2541 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2537.715 kb on + strand, within MPMX20_02405 at 2537.811 kb on - strand, within MPMX20_02405 at 2537.918 kb on + strand, within MPMX20_02405 at 2537.920 kb on + strand, within MPMX20_02405 at 2537.925 kb on + strand, within MPMX20_02405 at 2537.998 kb on + strand, within MPMX20_02405 at 2538.015 kb on - strand, within MPMX20_02405 at 2538.056 kb on + strand, within MPMX20_02405 at 2538.064 kb on - strand, within MPMX20_02405 at 2538.082 kb on + strand, within MPMX20_02405 at 2538.103 kb on + strand, within MPMX20_02405 at 2538.103 kb on + strand, within MPMX20_02405 at 2538.105 kb on + strand, within MPMX20_02405 at 2538.112 kb on - strand at 2538.122 kb on + strand at 2538.169 kb on - strand at 2538.209 kb on - strand at 2538.209 kb on - strand at 2538.210 kb on + strand at 2538.220 kb on + strand at 2538.228 kb on - strand at 2538.264 kb on + strand at 2538.395 kb on - strand at 2538.437 kb on + strand at 2538.490 kb on - strand at 2538.494 kb on + strand at 2538.518 kb on + strand at 2538.568 kb on - strand at 2538.586 kb on + strand at 2538.645 kb on - strand at 2538.660 kb on - strand at 2538.674 kb on + strand at 2538.751 kb on + strand at 2538.764 kb on - strand, within MPMX20_02406 at 2538.783 kb on - strand, within MPMX20_02406 at 2538.793 kb on - strand, within MPMX20_02406 at 2538.807 kb on + strand, within MPMX20_02406 at 2538.807 kb on + strand, within MPMX20_02406 at 2538.815 kb on - strand, within MPMX20_02406 at 2538.865 kb on + strand, within MPMX20_02406 at 2538.956 kb on - strand, within MPMX20_02406 at 2538.956 kb on - strand, within MPMX20_02406 at 2538.963 kb on - strand, within MPMX20_02406 at 2539.024 kb on - strand, within MPMX20_02406 at 2539.048 kb on + strand, within MPMX20_02406 at 2539.048 kb on + strand, within MPMX20_02406 at 2539.096 kb on + strand, within MPMX20_02406 at 2539.122 kb on + strand, within MPMX20_02406 at 2539.137 kb on + strand, within MPMX20_02406 at 2539.145 kb on - strand, within MPMX20_02406 at 2539.152 kb on - strand, within MPMX20_02406 at 2539.161 kb on + strand, within MPMX20_02406 at 2539.161 kb on + strand, within MPMX20_02406 at 2539.172 kb on + strand, within MPMX20_02406 at 2539.223 kb on + strand, within MPMX20_02406 at 2539.264 kb on + strand, within MPMX20_02406 at 2539.287 kb on + strand, within MPMX20_02406 at 2539.288 kb on + strand, within MPMX20_02406 at 2539.295 kb on - strand, within MPMX20_02406 at 2539.300 kb on + strand, within MPMX20_02406 at 2539.300 kb on + strand, within MPMX20_02406 at 2539.308 kb on - strand, within MPMX20_02406 at 2539.308 kb on - strand, within MPMX20_02406 at 2539.324 kb on - strand, within MPMX20_02406 at 2539.326 kb on + strand, within MPMX20_02406 at 2539.331 kb on + strand, within MPMX20_02406 at 2539.334 kb on - strand, within MPMX20_02406 at 2539.339 kb on - strand, within MPMX20_02406 at 2539.354 kb on + strand, within MPMX20_02406 at 2539.362 kb on + strand, within MPMX20_02406 at 2539.379 kb on - strand, within MPMX20_02406 at 2539.398 kb on - strand, within MPMX20_02406 at 2539.418 kb on - strand, within MPMX20_02406 at 2539.472 kb on + strand, within MPMX20_02406 at 2539.496 kb on + strand, within MPMX20_02406 at 2539.496 kb on + strand, within MPMX20_02406 at 2539.496 kb on + strand, within MPMX20_02406 at 2539.496 kb on + strand, within MPMX20_02406 at 2539.504 kb on - strand, within MPMX20_02406 at 2539.568 kb on - strand, within MPMX20_02406 at 2539.592 kb on + strand, within MPMX20_02406 at 2539.688 kb on + strand, within MPMX20_02406 at 2539.724 kb on + strand, within MPMX20_02406 at 2539.732 kb on - strand, within MPMX20_02406 at 2539.732 kb on - strand, within MPMX20_02406 at 2539.733 kb on + strand, within MPMX20_02406 at 2539.741 kb on - strand, within MPMX20_02406 at 2539.785 kb on - strand, within MPMX20_02406 at 2539.824 kb on - strand, within MPMX20_02406 at 2539.859 kb on + strand, within MPMX20_02406 at 2539.859 kb on + strand, within MPMX20_02406 at 2539.877 kb on - strand, within MPMX20_02406 at 2539.886 kb on + strand, within MPMX20_02406 at 2539.886 kb on + strand, within MPMX20_02406 at 2539.894 kb on - strand, within MPMX20_02406 at 2540.006 kb on + strand at 2540.006 kb on + strand at 2540.014 kb on - strand at 2540.016 kb on + strand at 2540.065 kb on - strand at 2540.116 kb on - strand at 2540.130 kb on - strand at 2540.140 kb on + strand at 2540.140 kb on + strand at 2540.148 kb on - strand at 2540.213 kb on + strand at 2540.261 kb on + strand at 2540.261 kb on + strand at 2540.318 kb on - strand, within MPMX20_02407 at 2540.327 kb on + strand, within MPMX20_02407 at 2540.363 kb on - strand, within MPMX20_02407 at 2540.401 kb on + strand, within MPMX20_02407 at 2540.409 kb on - strand, within MPMX20_02407 at 2540.409 kb on - strand, within MPMX20_02407 at 2540.409 kb on - strand, within MPMX20_02407 at 2540.409 kb on - strand, within MPMX20_02407 at 2540.516 kb on + strand, within MPMX20_02407 at 2540.516 kb on + strand, within MPMX20_02407 at 2540.524 kb on - strand, within MPMX20_02407 at 2540.731 kb on - strand, within MPMX20_02407 at 2540.735 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.754 kb on + strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.762 kb on - strand, within MPMX20_02407 at 2540.767 kb on - strand, within MPMX20_02407 at 2540.772 kb on + strand, within MPMX20_02407 at 2540.772 kb on - strand, within MPMX20_02407 at 2540.801 kb on - strand, within MPMX20_02407 at 2540.808 kb on - strand, within MPMX20_02407 at 2540.848 kb on + strand, within MPMX20_02407 at 2540.853 kb on + strand, within MPMX20_02407 at 2540.866 kb on - strand, within MPMX20_02407 at 2540.922 kb on - strand, within MPMX20_02407 at 2541.010 kb on - strand, within MPMX20_02407 at 2541.010 kb on - strand, within MPMX20_02407 at 2541.025 kb on - strand, within MPMX20_02407 at 2541.076 kb on - strand, within MPMX20_02407 at 2541.090 kb on - strand, within MPMX20_02407
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 2,537,715 + MPMX20_02405 0.65 +0.1 2,537,811 - MPMX20_02405 0.71 -1.7 2,537,918 + MPMX20_02405 0.78 +0.6 2,537,920 + MPMX20_02405 0.78 -1.0 2,537,925 + MPMX20_02405 0.78 +0.5 2,537,998 + MPMX20_02405 0.83 -0.3 2,538,015 - MPMX20_02405 0.84 -1.9 2,538,056 + MPMX20_02405 0.86 -1.2 2,538,064 - MPMX20_02405 0.87 +0.5 2,538,082 + MPMX20_02405 0.88 -0.4 2,538,103 + MPMX20_02405 0.90 +0.6 2,538,103 + MPMX20_02405 0.90 +0.8 2,538,105 + MPMX20_02405 0.90 +1.1 2,538,112 - +0.1 2,538,122 + +0.8 2,538,169 - -1.2 2,538,209 - -0.7 2,538,209 - +0.5 2,538,210 + +0.3 2,538,220 + +1.9 2,538,228 - +1.1 2,538,264 + -0.1 2,538,395 - -2.5 2,538,437 + +0.3 2,538,490 - +0.2 2,538,494 + +1.7 2,538,518 + +1.2 2,538,568 - -0.3 2,538,586 + -1.3 2,538,645 - -1.6 2,538,660 - -1.2 2,538,674 + -0.2 2,538,751 + -2.5 2,538,764 - MPMX20_02406 0.10 -1.3 2,538,783 - MPMX20_02406 0.11 -0.2 2,538,793 - MPMX20_02406 0.12 -0.0 2,538,807 + MPMX20_02406 0.13 +0.7 2,538,807 + MPMX20_02406 0.13 -1.0 2,538,815 - MPMX20_02406 0.13 +0.6 2,538,865 + MPMX20_02406 0.17 -1.4 2,538,956 - MPMX20_02406 0.23 -0.1 2,538,956 - MPMX20_02406 0.23 -0.4 2,538,963 - MPMX20_02406 0.23 -1.1 2,539,024 - MPMX20_02406 0.27 -0.7 2,539,048 + MPMX20_02406 0.29 -0.6 2,539,048 + MPMX20_02406 0.29 -1.1 2,539,096 + MPMX20_02406 0.32 -0.4 2,539,122 + MPMX20_02406 0.34 -1.9 2,539,137 + MPMX20_02406 0.35 -1.7 2,539,145 - MPMX20_02406 0.36 -0.6 2,539,152 - MPMX20_02406 0.36 -0.5 2,539,161 + MPMX20_02406 0.37 -0.6 2,539,161 + MPMX20_02406 0.37 -0.6 2,539,172 + MPMX20_02406 0.37 +1.1 2,539,223 + MPMX20_02406 0.41 -3.0 2,539,264 + MPMX20_02406 0.43 -0.4 2,539,287 + MPMX20_02406 0.45 -1.7 2,539,288 + MPMX20_02406 0.45 -2.4 2,539,295 - MPMX20_02406 0.46 -0.7 2,539,300 + MPMX20_02406 0.46 +0.0 2,539,300 + MPMX20_02406 0.46 +0.8 2,539,308 - MPMX20_02406 0.46 -0.7 2,539,308 - MPMX20_02406 0.46 -0.4 2,539,324 - MPMX20_02406 0.47 -1.8 2,539,326 + MPMX20_02406 0.48 +0.1 2,539,331 + MPMX20_02406 0.48 -1.1 2,539,334 - MPMX20_02406 0.48 -2.5 2,539,339 - MPMX20_02406 0.48 -0.8 2,539,354 + MPMX20_02406 0.49 -1.0 2,539,362 + MPMX20_02406 0.50 -0.6 2,539,379 - MPMX20_02406 0.51 +0.3 2,539,398 - MPMX20_02406 0.52 -0.2 2,539,418 - MPMX20_02406 0.54 -0.6 2,539,472 + MPMX20_02406 0.57 -0.5 2,539,496 + MPMX20_02406 0.59 -1.4 2,539,496 + MPMX20_02406 0.59 -0.6 2,539,496 + MPMX20_02406 0.59 +0.1 2,539,496 + MPMX20_02406 0.59 -1.1 2,539,504 - MPMX20_02406 0.60 +0.1 2,539,568 - MPMX20_02406 0.64 +1.3 2,539,592 + MPMX20_02406 0.65 +0.5 2,539,688 + MPMX20_02406 0.72 -1.1 2,539,724 + MPMX20_02406 0.74 +0.4 2,539,732 - MPMX20_02406 0.75 +0.1 2,539,732 - MPMX20_02406 0.75 -0.3 2,539,733 + MPMX20_02406 0.75 -1.4 2,539,741 - MPMX20_02406 0.75 -1.6 2,539,785 - MPMX20_02406 0.78 -0.9 2,539,824 - MPMX20_02406 0.81 +0.2 2,539,859 + MPMX20_02406 0.83 -0.4 2,539,859 + MPMX20_02406 0.83 -1.9 2,539,877 - MPMX20_02406 0.84 -2.7 2,539,886 + MPMX20_02406 0.85 -0.9 2,539,886 + MPMX20_02406 0.85 -0.7 2,539,894 - MPMX20_02406 0.86 -0.5 2,540,006 + +0.1 2,540,006 + -0.2 2,540,014 - -0.7 2,540,016 + -0.8 2,540,065 - +1.0 2,540,116 - -0.5 2,540,130 - +0.3 2,540,140 + +1.0 2,540,140 + -1.4 2,540,148 - -0.4 2,540,213 + +0.3 2,540,261 + +0.3 2,540,261 + +1.3 2,540,318 - MPMX20_02407 0.13 -0.2 2,540,327 + MPMX20_02407 0.14 +0.5 2,540,363 - MPMX20_02407 0.17 +1.4 2,540,401 + MPMX20_02407 0.21 +0.2 2,540,409 - MPMX20_02407 0.21 -0.3 2,540,409 - MPMX20_02407 0.21 -0.2 2,540,409 - MPMX20_02407 0.21 -2.6 2,540,409 - MPMX20_02407 0.21 -0.5 2,540,516 + MPMX20_02407 0.32 +1.1 2,540,516 + MPMX20_02407 0.32 -0.0 2,540,524 - MPMX20_02407 0.32 -1.1 2,540,731 - MPMX20_02407 0.52 -0.1 2,540,735 + MPMX20_02407 0.52 -0.2 2,540,754 + MPMX20_02407 0.54 -0.1 2,540,754 + MPMX20_02407 0.54 +0.1 2,540,754 + MPMX20_02407 0.54 +0.9 2,540,754 + MPMX20_02407 0.54 +0.3 2,540,754 + MPMX20_02407 0.54 +0.8 2,540,754 + MPMX20_02407 0.54 -1.6 2,540,754 + MPMX20_02407 0.54 -0.5 2,540,754 + MPMX20_02407 0.54 +0.2 2,540,754 + MPMX20_02407 0.54 +0.9 2,540,754 + MPMX20_02407 0.54 +0.2 2,540,754 + MPMX20_02407 0.54 -1.1 2,540,754 + MPMX20_02407 0.54 +1.3 2,540,754 + MPMX20_02407 0.54 +0.2 2,540,754 + MPMX20_02407 0.54 -0.8 2,540,754 + MPMX20_02407 0.54 -1.7 2,540,754 + MPMX20_02407 0.54 +0.9 2,540,754 + MPMX20_02407 0.54 +0.3 2,540,754 + MPMX20_02407 0.54 -0.4 2,540,754 + MPMX20_02407 0.54 -1.0 2,540,754 + MPMX20_02407 0.54 +1.1 2,540,754 + MPMX20_02407 0.54 +0.1 2,540,762 - MPMX20_02407 0.55 -0.5 2,540,762 - MPMX20_02407 0.55 -1.9 2,540,762 - MPMX20_02407 0.55 -0.8 2,540,762 - MPMX20_02407 0.55 +0.7 2,540,762 - MPMX20_02407 0.55 -1.2 2,540,762 - MPMX20_02407 0.55 +3.7 2,540,762 - MPMX20_02407 0.55 +0.4 2,540,762 - MPMX20_02407 0.55 +0.8 2,540,762 - MPMX20_02407 0.55 -0.4 2,540,762 - MPMX20_02407 0.55 +0.4 2,540,762 - MPMX20_02407 0.55 +0.3 2,540,762 - MPMX20_02407 0.55 +1.8 2,540,762 - MPMX20_02407 0.55 -0.2 2,540,762 - MPMX20_02407 0.55 +0.6 2,540,762 - MPMX20_02407 0.55 +1.4 2,540,767 - MPMX20_02407 0.55 -0.7 2,540,772 + MPMX20_02407 0.56 +0.3 2,540,772 - MPMX20_02407 0.56 +0.7 2,540,801 - MPMX20_02407 0.58 -0.2 2,540,808 - MPMX20_02407 0.59 -1.7 2,540,848 + MPMX20_02407 0.63 -0.5 2,540,853 + MPMX20_02407 0.63 +0.6 2,540,866 - MPMX20_02407 0.65 +0.1 2,540,922 - MPMX20_02407 0.70 +0.1 2,541,010 - MPMX20_02407 0.78 +1.1 2,541,010 - MPMX20_02407 0.78 -0.5 2,541,025 - MPMX20_02407 0.79 +0.2 2,541,076 - MPMX20_02407 0.84 +0.9 2,541,090 - MPMX20_02407 0.86 +0.0
Or see this region's nucleotide sequence