Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01730 and MPMX20_01731 are separated by 80 nucleotides MPMX20_01731 and MPMX20_01732 are separated by 6 nucleotides MPMX20_01732 and MPMX20_01733 are separated by 84 nucleotides MPMX20_01733 and MPMX20_01734 are separated by 141 nucleotides
MPMX20_01730: MPMX20_01730 - Glucans biosynthesis glucosyltransferase H, at 1,824,951 to 1,827,479
_01730
MPMX20_01731: MPMX20_01731 - hypothetical protein, at 1,827,560 to 1,827,787
_01731
MPMX20_01732: MPMX20_01732 - hypothetical protein, at 1,827,794 to 1,828,168
_01732
MPMX20_01733: MPMX20_01733 - Staphyloferrin B transporter, at 1,828,253 to 1,829,482
_01733
MPMX20_01734: MPMX20_01734 - Lipid A biosynthesis lauroyltransferase, at 1,829,624 to 1,830,550
_01734
Position (kb)
1828
1829
1830 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1827.264 kb on - strand at 1827.293 kb on + strand at 1827.392 kb on + strand at 1827.474 kb on + strand at 1827.474 kb on + strand at 1827.479 kb on + strand at 1827.490 kb on - strand at 1827.497 kb on + strand at 1827.497 kb on + strand at 1827.497 kb on - strand at 1827.505 kb on - strand at 1827.505 kb on - strand at 1827.505 kb on - strand at 1827.572 kb on - strand at 1827.630 kb on + strand, within MPMX20_01731 at 1827.650 kb on + strand, within MPMX20_01731 at 1827.653 kb on - strand, within MPMX20_01731 at 1827.655 kb on + strand, within MPMX20_01731 at 1827.655 kb on + strand, within MPMX20_01731 at 1827.658 kb on - strand, within MPMX20_01731 at 1827.660 kb on + strand, within MPMX20_01731 at 1827.663 kb on - strand, within MPMX20_01731 at 1827.663 kb on - strand, within MPMX20_01731 at 1827.692 kb on + strand, within MPMX20_01731 at 1827.692 kb on + strand, within MPMX20_01731 at 1827.695 kb on - strand, within MPMX20_01731 at 1827.710 kb on - strand, within MPMX20_01731 at 1827.777 kb on - strand at 1827.777 kb on - strand at 1827.821 kb on + strand at 1827.829 kb on - strand at 1827.871 kb on + strand, within MPMX20_01732 at 1827.871 kb on + strand, within MPMX20_01732 at 1827.871 kb on + strand, within MPMX20_01732 at 1827.879 kb on - strand, within MPMX20_01732 at 1827.898 kb on - strand, within MPMX20_01732 at 1827.900 kb on + strand, within MPMX20_01732 at 1827.960 kb on + strand, within MPMX20_01732 at 1827.963 kb on + strand, within MPMX20_01732 at 1828.010 kb on + strand, within MPMX20_01732 at 1828.035 kb on - strand, within MPMX20_01732 at 1828.126 kb on - strand, within MPMX20_01732 at 1828.147 kb on + strand at 1828.171 kb on - strand at 1828.171 kb on - strand at 1828.279 kb on + strand at 1828.279 kb on + strand at 1828.322 kb on + strand at 1828.322 kb on + strand at 1828.325 kb on - strand at 1828.327 kb on + strand at 1828.335 kb on - strand at 1828.336 kb on - strand at 1828.354 kb on - strand at 1828.455 kb on + strand, within MPMX20_01733 at 1828.467 kb on + strand, within MPMX20_01733 at 1828.480 kb on - strand, within MPMX20_01733 at 1828.480 kb on - strand, within MPMX20_01733 at 1828.487 kb on + strand, within MPMX20_01733 at 1828.487 kb on + strand, within MPMX20_01733 at 1828.495 kb on - strand, within MPMX20_01733 at 1828.495 kb on - strand, within MPMX20_01733 at 1828.495 kb on - strand, within MPMX20_01733 at 1828.543 kb on + strand, within MPMX20_01733 at 1828.549 kb on + strand, within MPMX20_01733 at 1828.560 kb on + strand, within MPMX20_01733 at 1828.567 kb on - strand, within MPMX20_01733 at 1828.568 kb on - strand, within MPMX20_01733 at 1828.673 kb on - strand, within MPMX20_01733 at 1828.683 kb on + strand, within MPMX20_01733 at 1828.688 kb on + strand, within MPMX20_01733 at 1828.773 kb on - strand, within MPMX20_01733 at 1828.785 kb on + strand, within MPMX20_01733 at 1828.799 kb on + strand, within MPMX20_01733 at 1828.831 kb on + strand, within MPMX20_01733 at 1828.858 kb on - strand, within MPMX20_01733 at 1828.911 kb on + strand, within MPMX20_01733 at 1828.919 kb on - strand, within MPMX20_01733 at 1828.935 kb on - strand, within MPMX20_01733 at 1828.989 kb on + strand, within MPMX20_01733 at 1829.013 kb on + strand, within MPMX20_01733 at 1829.013 kb on + strand, within MPMX20_01733 at 1829.176 kb on + strand, within MPMX20_01733 at 1829.217 kb on + strand, within MPMX20_01733 at 1829.265 kb on + strand, within MPMX20_01733 at 1829.265 kb on + strand, within MPMX20_01733 at 1829.271 kb on - strand, within MPMX20_01733 at 1829.273 kb on - strand, within MPMX20_01733 at 1829.273 kb on - strand, within MPMX20_01733 at 1829.273 kb on - strand, within MPMX20_01733 at 1829.299 kb on + strand, within MPMX20_01733 at 1829.312 kb on + strand, within MPMX20_01733 at 1829.314 kb on - strand, within MPMX20_01733 at 1829.317 kb on + strand, within MPMX20_01733 at 1829.325 kb on - strand, within MPMX20_01733 at 1829.404 kb on - strand at 1829.444 kb on - strand at 1829.444 kb on - strand at 1829.501 kb on + strand at 1829.514 kb on - strand at 1829.519 kb on - strand at 1829.531 kb on + strand at 1829.567 kb on + strand at 1829.604 kb on + strand at 1829.684 kb on - strand at 1829.761 kb on - strand, within MPMX20_01734 at 1829.770 kb on + strand, within MPMX20_01734 at 1829.792 kb on + strand, within MPMX20_01734 at 1829.800 kb on - strand, within MPMX20_01734 at 1829.877 kb on - strand, within MPMX20_01734 at 1829.891 kb on + strand, within MPMX20_01734 at 1830.003 kb on - strand, within MPMX20_01734 at 1830.060 kb on - strand, within MPMX20_01734 at 1830.190 kb on - strand, within MPMX20_01734 at 1830.211 kb on - strand, within MPMX20_01734 at 1830.211 kb on - strand, within MPMX20_01734 at 1830.211 kb on - strand, within MPMX20_01734 at 1830.211 kb on - strand, within MPMX20_01734 at 1830.211 kb on - strand, within MPMX20_01734 at 1830.223 kb on + strand, within MPMX20_01734 at 1830.231 kb on - strand, within MPMX20_01734 at 1830.265 kb on - strand, within MPMX20_01734 at 1830.286 kb on - strand, within MPMX20_01734 at 1830.292 kb on - strand, within MPMX20_01734 at 1830.319 kb on + strand, within MPMX20_01734 at 1830.349 kb on - strand, within MPMX20_01734 at 1830.358 kb on + strand, within MPMX20_01734 at 1830.366 kb on - strand, within MPMX20_01734 at 1830.366 kb on - strand, within MPMX20_01734 at 1830.366 kb on - strand, within MPMX20_01734 at 1830.431 kb on - strand, within MPMX20_01734 at 1830.447 kb on + strand, within MPMX20_01734 at 1830.447 kb on + strand, within MPMX20_01734 at 1830.447 kb on + strand, within MPMX20_01734 at 1830.447 kb on + strand, within MPMX20_01734 at 1830.447 kb on + strand, within MPMX20_01734 at 1830.447 kb on + strand, within MPMX20_01734 at 1830.447 kb on + strand, within MPMX20_01734 at 1830.455 kb on - strand, within MPMX20_01734 at 1830.455 kb on - strand, within MPMX20_01734 at 1830.455 kb on - strand, within MPMX20_01734 at 1830.455 kb on - strand, within MPMX20_01734 at 1830.455 kb on - strand, within MPMX20_01734 at 1830.455 kb on - strand, within MPMX20_01734 at 1830.455 kb on - strand, within MPMX20_01734 at 1830.455 kb on - strand, within MPMX20_01734 at 1830.455 kb on - strand, within MPMX20_01734 at 1830.455 kb on - strand, within MPMX20_01734 at 1830.455 kb on - strand, within MPMX20_01734
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 1,827,264 - -1.9 1,827,293 + +0.4 1,827,392 + +0.6 1,827,474 + +1.8 1,827,474 + -0.1 1,827,479 + -0.3 1,827,490 - +0.7 1,827,497 + +0.7 1,827,497 + +0.6 1,827,497 - -0.7 1,827,505 - -1.4 1,827,505 - -0.2 1,827,505 - -0.9 1,827,572 - -0.5 1,827,630 + MPMX20_01731 0.31 +1.0 1,827,650 + MPMX20_01731 0.39 +0.1 1,827,653 - MPMX20_01731 0.41 +0.4 1,827,655 + MPMX20_01731 0.42 -0.4 1,827,655 + MPMX20_01731 0.42 +0.8 1,827,658 - MPMX20_01731 0.43 +0.3 1,827,660 + MPMX20_01731 0.44 -0.6 1,827,663 - MPMX20_01731 0.45 +0.7 1,827,663 - MPMX20_01731 0.45 -0.4 1,827,692 + MPMX20_01731 0.58 -1.3 1,827,692 + MPMX20_01731 0.58 -0.4 1,827,695 - MPMX20_01731 0.59 -2.1 1,827,710 - MPMX20_01731 0.66 +0.8 1,827,777 - +1.4 1,827,777 - +0.2 1,827,821 + +0.1 1,827,829 - +1.3 1,827,871 + MPMX20_01732 0.21 +0.9 1,827,871 + MPMX20_01732 0.21 -1.9 1,827,871 + MPMX20_01732 0.21 +1.0 1,827,879 - MPMX20_01732 0.23 -0.0 1,827,898 - MPMX20_01732 0.28 -0.4 1,827,900 + MPMX20_01732 0.28 -0.5 1,827,960 + MPMX20_01732 0.44 +0.8 1,827,963 + MPMX20_01732 0.45 +0.2 1,828,010 + MPMX20_01732 0.58 -0.4 1,828,035 - MPMX20_01732 0.64 +2.0 1,828,126 - MPMX20_01732 0.89 +0.4 1,828,147 + -1.0 1,828,171 - -0.4 1,828,171 - +0.7 1,828,279 + +0.2 1,828,279 + -1.7 1,828,322 + +0.3 1,828,322 + -0.7 1,828,325 - +0.1 1,828,327 + -2.4 1,828,335 - +0.3 1,828,336 - -0.5 1,828,354 - +0.8 1,828,455 + MPMX20_01733 0.16 -0.2 1,828,467 + MPMX20_01733 0.17 +0.7 1,828,480 - MPMX20_01733 0.18 +0.5 1,828,480 - MPMX20_01733 0.18 +0.8 1,828,487 + MPMX20_01733 0.19 -0.4 1,828,487 + MPMX20_01733 0.19 +0.7 1,828,495 - MPMX20_01733 0.20 +0.0 1,828,495 - MPMX20_01733 0.20 -0.3 1,828,495 - MPMX20_01733 0.20 -0.2 1,828,543 + MPMX20_01733 0.24 -1.0 1,828,549 + MPMX20_01733 0.24 -0.0 1,828,560 + MPMX20_01733 0.25 +1.2 1,828,567 - MPMX20_01733 0.26 +1.7 1,828,568 - MPMX20_01733 0.26 +0.3 1,828,673 - MPMX20_01733 0.34 -2.3 1,828,683 + MPMX20_01733 0.35 +0.8 1,828,688 + MPMX20_01733 0.35 +0.4 1,828,773 - MPMX20_01733 0.42 +0.7 1,828,785 + MPMX20_01733 0.43 -0.7 1,828,799 + MPMX20_01733 0.44 -0.0 1,828,831 + MPMX20_01733 0.47 +0.5 1,828,858 - MPMX20_01733 0.49 -1.5 1,828,911 + MPMX20_01733 0.53 -1.0 1,828,919 - MPMX20_01733 0.54 -0.3 1,828,935 - MPMX20_01733 0.55 +0.8 1,828,989 + MPMX20_01733 0.60 +0.3 1,829,013 + MPMX20_01733 0.62 -2.3 1,829,013 + MPMX20_01733 0.62 +1.0 1,829,176 + MPMX20_01733 0.75 -0.3 1,829,217 + MPMX20_01733 0.78 +2.1 1,829,265 + MPMX20_01733 0.82 -2.2 1,829,265 + MPMX20_01733 0.82 +0.3 1,829,271 - MPMX20_01733 0.83 +0.0 1,829,273 - MPMX20_01733 0.83 -1.5 1,829,273 - MPMX20_01733 0.83 +1.0 1,829,273 - MPMX20_01733 0.83 +0.8 1,829,299 + MPMX20_01733 0.85 -0.5 1,829,312 + MPMX20_01733 0.86 +0.3 1,829,314 - MPMX20_01733 0.86 -0.0 1,829,317 + MPMX20_01733 0.87 -1.9 1,829,325 - MPMX20_01733 0.87 +0.6 1,829,404 - +0.8 1,829,444 - +0.8 1,829,444 - -1.5 1,829,501 + +0.1 1,829,514 - +0.2 1,829,519 - +0.4 1,829,531 + -0.6 1,829,567 + +0.8 1,829,604 + -0.2 1,829,684 - -2.3 1,829,761 - MPMX20_01734 0.15 -1.0 1,829,770 + MPMX20_01734 0.16 -2.0 1,829,792 + MPMX20_01734 0.18 -0.3 1,829,800 - MPMX20_01734 0.19 -0.3 1,829,877 - MPMX20_01734 0.27 -0.5 1,829,891 + MPMX20_01734 0.29 -1.0 1,830,003 - MPMX20_01734 0.41 -0.7 1,830,060 - MPMX20_01734 0.47 -1.7 1,830,190 - MPMX20_01734 0.61 -2.3 1,830,211 - MPMX20_01734 0.63 -1.8 1,830,211 - MPMX20_01734 0.63 +0.7 1,830,211 - MPMX20_01734 0.63 -3.2 1,830,211 - MPMX20_01734 0.63 -2.5 1,830,211 - MPMX20_01734 0.63 -2.8 1,830,223 + MPMX20_01734 0.65 -1.5 1,830,231 - MPMX20_01734 0.65 -2.2 1,830,265 - MPMX20_01734 0.69 -2.7 1,830,286 - MPMX20_01734 0.71 -0.1 1,830,292 - MPMX20_01734 0.72 -0.6 1,830,319 + MPMX20_01734 0.75 -2.0 1,830,349 - MPMX20_01734 0.78 -1.9 1,830,358 + MPMX20_01734 0.79 -1.4 1,830,366 - MPMX20_01734 0.80 -0.7 1,830,366 - MPMX20_01734 0.80 -2.3 1,830,366 - MPMX20_01734 0.80 -2.8 1,830,431 - MPMX20_01734 0.87 -0.3 1,830,447 + MPMX20_01734 0.89 -1.5 1,830,447 + MPMX20_01734 0.89 -1.7 1,830,447 + MPMX20_01734 0.89 -2.3 1,830,447 + MPMX20_01734 0.89 -1.0 1,830,447 + MPMX20_01734 0.89 -1.3 1,830,447 + MPMX20_01734 0.89 -2.3 1,830,447 + MPMX20_01734 0.89 -1.5 1,830,455 - MPMX20_01734 0.90 -1.6 1,830,455 - MPMX20_01734 0.90 -0.4 1,830,455 - MPMX20_01734 0.90 -1.7 1,830,455 - MPMX20_01734 0.90 -1.7 1,830,455 - MPMX20_01734 0.90 -3.3 1,830,455 - MPMX20_01734 0.90 -3.5 1,830,455 - MPMX20_01734 0.90 -0.2 1,830,455 - MPMX20_01734 0.90 -1.5 1,830,455 - MPMX20_01734 0.90 -1.7 1,830,455 - MPMX20_01734 0.90 -1.4 1,830,455 - MPMX20_01734 0.90 -1.2
Or see this region's nucleotide sequence