Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01356 and MPMX20_01357 overlap by 1 nucleotides MPMX20_01357 and MPMX20_01358 are separated by 83 nucleotides MPMX20_01358 and MPMX20_01359 are separated by 169 nucleotides
MPMX20_01356: MPMX20_01356 - Succinate--CoA ligase [ADP-forming] subunit beta, at 1,421,351 to 1,422,517
_01356
MPMX20_01357: MPMX20_01357 - Succinate--CoA ligase [ADP-forming] subunit alpha, at 1,422,517 to 1,423,386
_01357
MPMX20_01358: MPMX20_01358 - Mannosyl-D-glycerate transport/metabolism system repressor MngR, at 1,423,470 to 1,424,186
_01358
MPMX20_01359: MPMX20_01359 - PTS system 2-O-alpha-mannosyl-D-glycerate-specific EIIABC component, at 1,424,356 to 1,426,272
_01359
Position (kb)
1423
1424
1425 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1422.506 kb on - strand at 1422.540 kb on + strand at 1422.561 kb on - strand at 1422.675 kb on + strand, within MPMX20_01357 at 1422.675 kb on + strand, within MPMX20_01357 at 1422.695 kb on + strand, within MPMX20_01357 at 1422.800 kb on - strand, within MPMX20_01357 at 1422.800 kb on - strand, within MPMX20_01357 at 1422.857 kb on + strand, within MPMX20_01357 at 1422.885 kb on - strand, within MPMX20_01357 at 1422.902 kb on + strand, within MPMX20_01357 at 1422.910 kb on - strand, within MPMX20_01357 at 1423.116 kb on + strand, within MPMX20_01357 at 1423.253 kb on - strand, within MPMX20_01357 at 1423.292 kb on - strand, within MPMX20_01357 at 1423.391 kb on + strand at 1423.403 kb on + strand at 1423.409 kb on - strand at 1423.521 kb on - strand at 1423.630 kb on - strand, within MPMX20_01358 at 1423.630 kb on - strand, within MPMX20_01358 at 1423.721 kb on + strand, within MPMX20_01358 at 1423.731 kb on - strand, within MPMX20_01358 at 1423.733 kb on + strand, within MPMX20_01358 at 1423.875 kb on - strand, within MPMX20_01358 at 1423.904 kb on - strand, within MPMX20_01358 at 1423.997 kb on + strand, within MPMX20_01358 at 1424.066 kb on + strand, within MPMX20_01358 at 1424.066 kb on + strand, within MPMX20_01358 at 1424.190 kb on - strand at 1424.376 kb on - strand at 1424.376 kb on - strand at 1424.376 kb on - strand at 1424.412 kb on - strand at 1424.513 kb on + strand at 1424.519 kb on + strand at 1424.527 kb on - strand at 1424.527 kb on - strand at 1424.527 kb on - strand at 1424.534 kb on + strand at 1424.548 kb on - strand, within MPMX20_01359 at 1424.602 kb on - strand, within MPMX20_01359 at 1424.611 kb on + strand, within MPMX20_01359 at 1424.619 kb on - strand, within MPMX20_01359 at 1424.752 kb on - strand, within MPMX20_01359 at 1424.757 kb on + strand, within MPMX20_01359 at 1424.884 kb on + strand, within MPMX20_01359 at 1424.891 kb on + strand, within MPMX20_01359 at 1424.891 kb on + strand, within MPMX20_01359 at 1424.891 kb on + strand, within MPMX20_01359 at 1424.892 kb on - strand, within MPMX20_01359 at 1424.892 kb on - strand, within MPMX20_01359 at 1424.944 kb on - strand, within MPMX20_01359 at 1425.000 kb on + strand, within MPMX20_01359 at 1425.000 kb on + strand, within MPMX20_01359 at 1425.010 kb on + strand, within MPMX20_01359 at 1425.010 kb on + strand, within MPMX20_01359 at 1425.015 kb on + strand, within MPMX20_01359 at 1425.016 kb on - strand, within MPMX20_01359 at 1425.018 kb on - strand, within MPMX20_01359 at 1425.018 kb on - strand, within MPMX20_01359 at 1425.018 kb on - strand, within MPMX20_01359 at 1425.023 kb on - strand, within MPMX20_01359 at 1425.027 kb on - strand, within MPMX20_01359 at 1425.051 kb on - strand, within MPMX20_01359 at 1425.071 kb on + strand, within MPMX20_01359 at 1425.139 kb on + strand, within MPMX20_01359 at 1425.139 kb on + strand, within MPMX20_01359 at 1425.141 kb on - strand, within MPMX20_01359 at 1425.141 kb on - strand, within MPMX20_01359 at 1425.147 kb on - strand, within MPMX20_01359
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 1,422,506 - -0.8 1,422,540 + -2.9 1,422,561 - -2.7 1,422,675 + MPMX20_01357 0.18 -3.5 1,422,675 + MPMX20_01357 0.18 -4.0 1,422,695 + MPMX20_01357 0.20 -1.1 1,422,800 - MPMX20_01357 0.33 -2.2 1,422,800 - MPMX20_01357 0.33 -3.5 1,422,857 + MPMX20_01357 0.39 -3.9 1,422,885 - MPMX20_01357 0.42 -3.6 1,422,902 + MPMX20_01357 0.44 -1.8 1,422,910 - MPMX20_01357 0.45 -1.1 1,423,116 + MPMX20_01357 0.69 -1.5 1,423,253 - MPMX20_01357 0.85 -1.3 1,423,292 - MPMX20_01357 0.89 -3.5 1,423,391 + -0.9 1,423,403 + -3.1 1,423,409 - -0.4 1,423,521 - -0.2 1,423,630 - MPMX20_01358 0.22 -0.1 1,423,630 - MPMX20_01358 0.22 -0.1 1,423,721 + MPMX20_01358 0.35 -0.1 1,423,731 - MPMX20_01358 0.36 -0.3 1,423,733 + MPMX20_01358 0.37 -0.7 1,423,875 - MPMX20_01358 0.56 -0.1 1,423,904 - MPMX20_01358 0.61 -0.5 1,423,997 + MPMX20_01358 0.74 -1.0 1,424,066 + MPMX20_01358 0.83 -0.3 1,424,066 + MPMX20_01358 0.83 -1.8 1,424,190 - +0.0 1,424,376 - -0.8 1,424,376 - -0.8 1,424,376 - -0.7 1,424,412 - -0.5 1,424,513 + +0.1 1,424,519 + +0.2 1,424,527 - -0.6 1,424,527 - +1.0 1,424,527 - +0.9 1,424,534 + +0.4 1,424,548 - MPMX20_01359 0.10 -0.4 1,424,602 - MPMX20_01359 0.13 +2.2 1,424,611 + MPMX20_01359 0.13 +1.2 1,424,619 - MPMX20_01359 0.14 +0.9 1,424,752 - MPMX20_01359 0.21 -0.4 1,424,757 + MPMX20_01359 0.21 -1.2 1,424,884 + MPMX20_01359 0.28 -1.5 1,424,891 + MPMX20_01359 0.28 -0.3 1,424,891 + MPMX20_01359 0.28 -0.3 1,424,891 + MPMX20_01359 0.28 +0.8 1,424,892 - MPMX20_01359 0.28 +0.9 1,424,892 - MPMX20_01359 0.28 -0.0 1,424,944 - MPMX20_01359 0.31 -0.3 1,425,000 + MPMX20_01359 0.34 -0.5 1,425,000 + MPMX20_01359 0.34 +1.2 1,425,010 + MPMX20_01359 0.34 -0.2 1,425,010 + MPMX20_01359 0.34 -0.3 1,425,015 + MPMX20_01359 0.34 +0.7 1,425,016 - MPMX20_01359 0.34 +0.5 1,425,018 - MPMX20_01359 0.35 -0.1 1,425,018 - MPMX20_01359 0.35 +0.2 1,425,018 - MPMX20_01359 0.35 -1.3 1,425,023 - MPMX20_01359 0.35 -0.1 1,425,027 - MPMX20_01359 0.35 +0.8 1,425,051 - MPMX20_01359 0.36 +0.3 1,425,071 + MPMX20_01359 0.37 -0.1 1,425,139 + MPMX20_01359 0.41 -1.0 1,425,139 + MPMX20_01359 0.41 +0.3 1,425,141 - MPMX20_01359 0.41 +0.3 1,425,141 - MPMX20_01359 0.41 +0.9 1,425,147 - MPMX20_01359 0.41 -0.7
Or see this region's nucleotide sequence