Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01358

Experiment: L-Glutamic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01356 and MPMX20_01357 overlap by 1 nucleotidesMPMX20_01357 and MPMX20_01358 are separated by 83 nucleotidesMPMX20_01358 and MPMX20_01359 are separated by 169 nucleotides MPMX20_01356: MPMX20_01356 - Succinate--CoA ligase [ADP-forming] subunit beta, at 1,421,351 to 1,422,517 _01356 MPMX20_01357: MPMX20_01357 - Succinate--CoA ligase [ADP-forming] subunit alpha, at 1,422,517 to 1,423,386 _01357 MPMX20_01358: MPMX20_01358 - Mannosyl-D-glycerate transport/metabolism system repressor MngR, at 1,423,470 to 1,424,186 _01358 MPMX20_01359: MPMX20_01359 - PTS system 2-O-alpha-mannosyl-D-glycerate-specific EIIABC component, at 1,424,356 to 1,426,272 _01359 Position (kb) 1423 1424 1425Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1422.506 kb on - strandat 1422.540 kb on + strandat 1422.561 kb on - strandat 1422.675 kb on + strand, within MPMX20_01357at 1422.675 kb on + strand, within MPMX20_01357at 1422.695 kb on + strand, within MPMX20_01357at 1422.800 kb on - strand, within MPMX20_01357at 1422.800 kb on - strand, within MPMX20_01357at 1422.857 kb on + strand, within MPMX20_01357at 1422.885 kb on - strand, within MPMX20_01357at 1422.902 kb on + strand, within MPMX20_01357at 1422.910 kb on - strand, within MPMX20_01357at 1423.116 kb on + strand, within MPMX20_01357at 1423.253 kb on - strand, within MPMX20_01357at 1423.292 kb on - strand, within MPMX20_01357at 1423.391 kb on + strandat 1423.403 kb on + strandat 1423.409 kb on - strandat 1423.521 kb on - strandat 1423.630 kb on - strand, within MPMX20_01358at 1423.630 kb on - strand, within MPMX20_01358at 1423.721 kb on + strand, within MPMX20_01358at 1423.731 kb on - strand, within MPMX20_01358at 1423.733 kb on + strand, within MPMX20_01358at 1423.875 kb on - strand, within MPMX20_01358at 1423.904 kb on - strand, within MPMX20_01358at 1423.997 kb on + strand, within MPMX20_01358at 1424.066 kb on + strand, within MPMX20_01358at 1424.066 kb on + strand, within MPMX20_01358at 1424.190 kb on - strandat 1424.376 kb on - strandat 1424.376 kb on - strandat 1424.376 kb on - strandat 1424.412 kb on - strandat 1424.513 kb on + strandat 1424.519 kb on + strandat 1424.527 kb on - strandat 1424.527 kb on - strandat 1424.527 kb on - strandat 1424.534 kb on + strandat 1424.548 kb on - strand, within MPMX20_01359at 1424.602 kb on - strand, within MPMX20_01359at 1424.611 kb on + strand, within MPMX20_01359at 1424.619 kb on - strand, within MPMX20_01359at 1424.752 kb on - strand, within MPMX20_01359at 1424.757 kb on + strand, within MPMX20_01359at 1424.884 kb on + strand, within MPMX20_01359at 1424.891 kb on + strand, within MPMX20_01359at 1424.891 kb on + strand, within MPMX20_01359at 1424.891 kb on + strand, within MPMX20_01359at 1424.892 kb on - strand, within MPMX20_01359at 1424.892 kb on - strand, within MPMX20_01359at 1424.944 kb on - strand, within MPMX20_01359at 1425.000 kb on + strand, within MPMX20_01359at 1425.000 kb on + strand, within MPMX20_01359at 1425.010 kb on + strand, within MPMX20_01359at 1425.010 kb on + strand, within MPMX20_01359at 1425.015 kb on + strand, within MPMX20_01359at 1425.016 kb on - strand, within MPMX20_01359at 1425.018 kb on - strand, within MPMX20_01359at 1425.018 kb on - strand, within MPMX20_01359at 1425.018 kb on - strand, within MPMX20_01359at 1425.023 kb on - strand, within MPMX20_01359at 1425.027 kb on - strand, within MPMX20_01359at 1425.051 kb on - strand, within MPMX20_01359at 1425.071 kb on + strand, within MPMX20_01359at 1425.139 kb on + strand, within MPMX20_01359at 1425.139 kb on + strand, within MPMX20_01359at 1425.141 kb on - strand, within MPMX20_01359at 1425.141 kb on - strand, within MPMX20_01359at 1425.147 kb on - strand, within MPMX20_01359

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (C)
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1,422,506 - -0.8
1,422,540 + -2.9
1,422,561 - -2.7
1,422,675 + MPMX20_01357 0.18 -3.5
1,422,675 + MPMX20_01357 0.18 -4.0
1,422,695 + MPMX20_01357 0.20 -1.1
1,422,800 - MPMX20_01357 0.33 -2.2
1,422,800 - MPMX20_01357 0.33 -3.5
1,422,857 + MPMX20_01357 0.39 -3.9
1,422,885 - MPMX20_01357 0.42 -3.6
1,422,902 + MPMX20_01357 0.44 -1.8
1,422,910 - MPMX20_01357 0.45 -1.1
1,423,116 + MPMX20_01357 0.69 -1.5
1,423,253 - MPMX20_01357 0.85 -1.3
1,423,292 - MPMX20_01357 0.89 -3.5
1,423,391 + -0.9
1,423,403 + -3.1
1,423,409 - -0.4
1,423,521 - -0.2
1,423,630 - MPMX20_01358 0.22 -0.1
1,423,630 - MPMX20_01358 0.22 -0.1
1,423,721 + MPMX20_01358 0.35 -0.1
1,423,731 - MPMX20_01358 0.36 -0.3
1,423,733 + MPMX20_01358 0.37 -0.7
1,423,875 - MPMX20_01358 0.56 -0.1
1,423,904 - MPMX20_01358 0.61 -0.5
1,423,997 + MPMX20_01358 0.74 -1.0
1,424,066 + MPMX20_01358 0.83 -0.3
1,424,066 + MPMX20_01358 0.83 -1.8
1,424,190 - +0.0
1,424,376 - -0.8
1,424,376 - -0.8
1,424,376 - -0.7
1,424,412 - -0.5
1,424,513 + +0.1
1,424,519 + +0.2
1,424,527 - -0.6
1,424,527 - +1.0
1,424,527 - +0.9
1,424,534 + +0.4
1,424,548 - MPMX20_01359 0.10 -0.4
1,424,602 - MPMX20_01359 0.13 +2.2
1,424,611 + MPMX20_01359 0.13 +1.2
1,424,619 - MPMX20_01359 0.14 +0.9
1,424,752 - MPMX20_01359 0.21 -0.4
1,424,757 + MPMX20_01359 0.21 -1.2
1,424,884 + MPMX20_01359 0.28 -1.5
1,424,891 + MPMX20_01359 0.28 -0.3
1,424,891 + MPMX20_01359 0.28 -0.3
1,424,891 + MPMX20_01359 0.28 +0.8
1,424,892 - MPMX20_01359 0.28 +0.9
1,424,892 - MPMX20_01359 0.28 -0.0
1,424,944 - MPMX20_01359 0.31 -0.3
1,425,000 + MPMX20_01359 0.34 -0.5
1,425,000 + MPMX20_01359 0.34 +1.2
1,425,010 + MPMX20_01359 0.34 -0.2
1,425,010 + MPMX20_01359 0.34 -0.3
1,425,015 + MPMX20_01359 0.34 +0.7
1,425,016 - MPMX20_01359 0.34 +0.5
1,425,018 - MPMX20_01359 0.35 -0.1
1,425,018 - MPMX20_01359 0.35 +0.2
1,425,018 - MPMX20_01359 0.35 -1.3
1,425,023 - MPMX20_01359 0.35 -0.1
1,425,027 - MPMX20_01359 0.35 +0.8
1,425,051 - MPMX20_01359 0.36 +0.3
1,425,071 + MPMX20_01359 0.37 -0.1
1,425,139 + MPMX20_01359 0.41 -1.0
1,425,139 + MPMX20_01359 0.41 +0.3
1,425,141 - MPMX20_01359 0.41 +0.3
1,425,141 - MPMX20_01359 0.41 +0.9
1,425,147 - MPMX20_01359 0.41 -0.7

Or see this region's nucleotide sequence