Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00910 and MPMX20_00911 are separated by 239 nucleotides MPMX20_00911 and MPMX20_00912 are separated by 46 nucleotides MPMX20_00912 and MPMX20_00913 overlap by 30 nucleotides
MPMX20_00910: MPMX20_00910 - Acyl-coenzyme A dehydrogenase, at 958,021 to 960,465
_00910
MPMX20_00911: MPMX20_00911 - Phosphoheptose isomerase, at 960,705 to 961,283
_00911
MPMX20_00912: MPMX20_00912 - Putative glutamine amidotransferase YafJ, at 961,330 to 962,097
_00912
MPMX20_00913: MPMX20_00913 - hypothetical protein, at 962,068 to 962,808
_00913
Position (kb)
961
962
963 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 960.350 kb on - strand at 960.365 kb on + strand at 960.373 kb on - strand at 960.378 kb on + strand at 960.432 kb on + strand at 960.432 kb on + strand at 960.432 kb on + strand at 960.432 kb on + strand at 960.435 kb on - strand at 960.435 kb on - strand at 960.440 kb on - strand at 960.580 kb on + strand at 960.585 kb on + strand at 960.593 kb on - strand at 960.629 kb on + strand at 960.629 kb on + strand at 960.629 kb on + strand at 960.630 kb on + strand at 960.637 kb on - strand at 960.660 kb on + strand at 960.663 kb on - strand at 960.664 kb on + strand at 960.670 kb on - strand at 960.675 kb on - strand at 961.285 kb on + strand at 961.295 kb on + strand at 961.303 kb on - strand at 961.330 kb on - strand at 961.384 kb on - strand at 961.437 kb on + strand, within MPMX20_00912 at 961.456 kb on + strand, within MPMX20_00912 at 961.456 kb on + strand, within MPMX20_00912 at 961.456 kb on + strand, within MPMX20_00912 at 961.483 kb on + strand, within MPMX20_00912 at 961.514 kb on + strand, within MPMX20_00912 at 961.519 kb on + strand, within MPMX20_00912 at 961.519 kb on + strand, within MPMX20_00912 at 961.527 kb on - strand, within MPMX20_00912 at 961.527 kb on - strand, within MPMX20_00912 at 961.532 kb on - strand, within MPMX20_00912 at 961.563 kb on - strand, within MPMX20_00912 at 961.613 kb on + strand, within MPMX20_00912 at 961.641 kb on - strand, within MPMX20_00912 at 961.738 kb on + strand, within MPMX20_00912 at 961.765 kb on - strand, within MPMX20_00912 at 961.782 kb on + strand, within MPMX20_00912 at 961.810 kb on - strand, within MPMX20_00912 at 961.817 kb on + strand, within MPMX20_00912 at 961.817 kb on + strand, within MPMX20_00912 at 961.817 kb on + strand, within MPMX20_00912 at 961.825 kb on - strand, within MPMX20_00912 at 961.825 kb on - strand, within MPMX20_00912 at 961.825 kb on - strand, within MPMX20_00912 at 961.825 kb on - strand, within MPMX20_00912 at 961.842 kb on + strand, within MPMX20_00912 at 961.855 kb on - strand, within MPMX20_00912 at 961.912 kb on - strand, within MPMX20_00912 at 961.922 kb on + strand, within MPMX20_00912 at 962.045 kb on + strand at 962.190 kb on + strand, within MPMX20_00913 at 962.200 kb on + strand, within MPMX20_00913 at 962.257 kb on + strand, within MPMX20_00913 at 962.291 kb on + strand, within MPMX20_00913 at 962.291 kb on + strand, within MPMX20_00913 at 962.291 kb on + strand, within MPMX20_00913 at 962.294 kb on - strand, within MPMX20_00913 at 962.299 kb on - strand, within MPMX20_00913 at 962.313 kb on + strand, within MPMX20_00913 at 962.315 kb on + strand, within MPMX20_00913 at 962.323 kb on - strand, within MPMX20_00913 at 962.394 kb on + strand, within MPMX20_00913 at 962.394 kb on + strand, within MPMX20_00913 at 962.402 kb on - strand, within MPMX20_00913 at 962.443 kb on + strand, within MPMX20_00913 at 962.451 kb on - strand, within MPMX20_00913 at 962.451 kb on - strand, within MPMX20_00913 at 962.451 kb on - strand, within MPMX20_00913 at 962.495 kb on + strand, within MPMX20_00913 at 962.503 kb on - strand, within MPMX20_00913 at 962.554 kb on + strand, within MPMX20_00913 at 962.567 kb on - strand, within MPMX20_00913 at 962.581 kb on - strand, within MPMX20_00913 at 962.584 kb on + strand, within MPMX20_00913 at 962.600 kb on + strand, within MPMX20_00913 at 962.608 kb on - strand, within MPMX20_00913 at 962.610 kb on + strand, within MPMX20_00913 at 962.618 kb on - strand, within MPMX20_00913 at 962.638 kb on + strand, within MPMX20_00913 at 962.638 kb on + strand, within MPMX20_00913 at 962.648 kb on - strand, within MPMX20_00913 at 962.650 kb on + strand, within MPMX20_00913 at 962.679 kb on + strand, within MPMX20_00913 at 962.721 kb on + strand, within MPMX20_00913 at 962.729 kb on - strand, within MPMX20_00913 at 962.730 kb on + strand, within MPMX20_00913 at 962.738 kb on - strand at 962.738 kb on - strand at 962.738 kb on - strand at 962.743 kb on + strand at 962.746 kb on - strand at 962.746 kb on - strand at 962.751 kb on - strand at 962.791 kb on - strand at 962.808 kb on + strand at 962.818 kb on - strand at 962.895 kb on + strand at 962.895 kb on + strand at 962.895 kb on + strand at 962.895 kb on + strand at 962.898 kb on - strand at 962.898 kb on - strand at 962.901 kb on - strand at 962.903 kb on - strand at 962.903 kb on - strand at 962.903 kb on - strand at 962.903 kb on - strand at 962.903 kb on - strand at 962.903 kb on - strand at 962.903 kb on - strand at 962.903 kb on - strand at 962.903 kb on - strand at 962.914 kb on - strand at 962.989 kb on - strand at 963.002 kb on - strand at 963.017 kb on - strand at 963.084 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 960,350 - -0.9 960,365 + -1.3 960,373 - -2.3 960,378 + -2.0 960,432 + -0.2 960,432 + -1.9 960,432 + -2.7 960,432 + -1.1 960,435 - -1.7 960,435 - -1.0 960,440 - -1.6 960,580 + +0.6 960,585 + -0.9 960,593 - +0.8 960,629 + +0.0 960,629 + -0.3 960,629 + -0.3 960,630 + +0.6 960,637 - -0.8 960,660 + +0.7 960,663 - -0.7 960,664 + +1.0 960,670 - +0.6 960,675 - -1.8 961,285 + +0.1 961,295 + +0.8 961,303 - -0.4 961,330 - -0.2 961,384 - +1.7 961,437 + MPMX20_00912 0.14 +0.4 961,456 + MPMX20_00912 0.16 +0.4 961,456 + MPMX20_00912 0.16 -0.1 961,456 + MPMX20_00912 0.16 -0.5 961,483 + MPMX20_00912 0.20 +0.4 961,514 + MPMX20_00912 0.24 +0.6 961,519 + MPMX20_00912 0.25 -1.1 961,519 + MPMX20_00912 0.25 -0.3 961,527 - MPMX20_00912 0.26 +1.3 961,527 - MPMX20_00912 0.26 +0.2 961,532 - MPMX20_00912 0.26 -1.3 961,563 - MPMX20_00912 0.30 -1.6 961,613 + MPMX20_00912 0.37 +0.3 961,641 - MPMX20_00912 0.40 +0.3 961,738 + MPMX20_00912 0.53 -0.5 961,765 - MPMX20_00912 0.57 +0.5 961,782 + MPMX20_00912 0.59 -0.3 961,810 - MPMX20_00912 0.62 -0.6 961,817 + MPMX20_00912 0.63 +0.2 961,817 + MPMX20_00912 0.63 +0.1 961,817 + MPMX20_00912 0.63 +0.2 961,825 - MPMX20_00912 0.64 +2.2 961,825 - MPMX20_00912 0.64 -3.7 961,825 - MPMX20_00912 0.64 +0.7 961,825 - MPMX20_00912 0.64 -0.3 961,842 + MPMX20_00912 0.67 +0.4 961,855 - MPMX20_00912 0.68 -2.0 961,912 - MPMX20_00912 0.76 +0.5 961,922 + MPMX20_00912 0.77 -0.4 962,045 + +0.7 962,190 + MPMX20_00913 0.16 -0.4 962,200 + MPMX20_00913 0.18 +0.6 962,257 + MPMX20_00913 0.26 -1.0 962,291 + MPMX20_00913 0.30 +0.3 962,291 + MPMX20_00913 0.30 +1.6 962,291 + MPMX20_00913 0.30 +0.1 962,294 - MPMX20_00913 0.30 +0.1 962,299 - MPMX20_00913 0.31 +0.6 962,313 + MPMX20_00913 0.33 -0.3 962,315 + MPMX20_00913 0.33 -2.2 962,323 - MPMX20_00913 0.34 -2.0 962,394 + MPMX20_00913 0.44 -1.1 962,394 + MPMX20_00913 0.44 -0.8 962,402 - MPMX20_00913 0.45 +0.6 962,443 + MPMX20_00913 0.51 -1.1 962,451 - MPMX20_00913 0.52 -0.5 962,451 - MPMX20_00913 0.52 +0.5 962,451 - MPMX20_00913 0.52 +1.0 962,495 + MPMX20_00913 0.58 +1.4 962,503 - MPMX20_00913 0.59 -0.6 962,554 + MPMX20_00913 0.66 -0.8 962,567 - MPMX20_00913 0.67 -0.7 962,581 - MPMX20_00913 0.69 +0.2 962,584 + MPMX20_00913 0.70 -0.3 962,600 + MPMX20_00913 0.72 +1.0 962,608 - MPMX20_00913 0.73 -0.5 962,610 + MPMX20_00913 0.73 -1.8 962,618 - MPMX20_00913 0.74 +1.1 962,638 + MPMX20_00913 0.77 -0.1 962,638 + MPMX20_00913 0.77 +0.7 962,648 - MPMX20_00913 0.78 -0.9 962,650 + MPMX20_00913 0.79 -0.2 962,679 + MPMX20_00913 0.82 +0.4 962,721 + MPMX20_00913 0.88 +0.7 962,729 - MPMX20_00913 0.89 -0.7 962,730 + MPMX20_00913 0.89 +0.8 962,738 - +1.0 962,738 - +0.9 962,738 - +0.0 962,743 + +1.1 962,746 - +0.2 962,746 - +0.9 962,751 - +0.3 962,791 - -1.6 962,808 + -2.1 962,818 - +0.4 962,895 + +0.3 962,895 + +0.1 962,895 + +1.6 962,895 + +0.4 962,898 - +1.9 962,898 - +0.5 962,901 - -1.0 962,903 - -1.3 962,903 - -1.2 962,903 - +0.6 962,903 - +0.4 962,903 - +0.2 962,903 - -1.6 962,903 - +0.1 962,903 - +0.4 962,903 - -0.6 962,914 - -0.4 962,989 - +0.5 963,002 - +0.4 963,017 - +1.7 963,084 - +1.0
Or see this region's nucleotide sequence