Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00912

Experiment: L-Glutamic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00910 and MPMX20_00911 are separated by 239 nucleotidesMPMX20_00911 and MPMX20_00912 are separated by 46 nucleotidesMPMX20_00912 and MPMX20_00913 overlap by 30 nucleotides MPMX20_00910: MPMX20_00910 - Acyl-coenzyme A dehydrogenase, at 958,021 to 960,465 _00910 MPMX20_00911: MPMX20_00911 - Phosphoheptose isomerase, at 960,705 to 961,283 _00911 MPMX20_00912: MPMX20_00912 - Putative glutamine amidotransferase YafJ, at 961,330 to 962,097 _00912 MPMX20_00913: MPMX20_00913 - hypothetical protein, at 962,068 to 962,808 _00913 Position (kb) 961 962 963Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 960.350 kb on - strandat 960.365 kb on + strandat 960.373 kb on - strandat 960.378 kb on + strandat 960.432 kb on + strandat 960.432 kb on + strandat 960.432 kb on + strandat 960.432 kb on + strandat 960.435 kb on - strandat 960.435 kb on - strandat 960.440 kb on - strandat 960.580 kb on + strandat 960.585 kb on + strandat 960.593 kb on - strandat 960.629 kb on + strandat 960.629 kb on + strandat 960.629 kb on + strandat 960.630 kb on + strandat 960.637 kb on - strandat 960.660 kb on + strandat 960.663 kb on - strandat 960.664 kb on + strandat 960.670 kb on - strandat 960.675 kb on - strandat 961.285 kb on + strandat 961.295 kb on + strandat 961.303 kb on - strandat 961.330 kb on - strandat 961.384 kb on - strandat 961.437 kb on + strand, within MPMX20_00912at 961.456 kb on + strand, within MPMX20_00912at 961.456 kb on + strand, within MPMX20_00912at 961.456 kb on + strand, within MPMX20_00912at 961.483 kb on + strand, within MPMX20_00912at 961.514 kb on + strand, within MPMX20_00912at 961.519 kb on + strand, within MPMX20_00912at 961.519 kb on + strand, within MPMX20_00912at 961.527 kb on - strand, within MPMX20_00912at 961.527 kb on - strand, within MPMX20_00912at 961.532 kb on - strand, within MPMX20_00912at 961.563 kb on - strand, within MPMX20_00912at 961.613 kb on + strand, within MPMX20_00912at 961.641 kb on - strand, within MPMX20_00912at 961.738 kb on + strand, within MPMX20_00912at 961.765 kb on - strand, within MPMX20_00912at 961.782 kb on + strand, within MPMX20_00912at 961.810 kb on - strand, within MPMX20_00912at 961.817 kb on + strand, within MPMX20_00912at 961.817 kb on + strand, within MPMX20_00912at 961.817 kb on + strand, within MPMX20_00912at 961.825 kb on - strand, within MPMX20_00912at 961.825 kb on - strand, within MPMX20_00912at 961.825 kb on - strand, within MPMX20_00912at 961.825 kb on - strand, within MPMX20_00912at 961.842 kb on + strand, within MPMX20_00912at 961.855 kb on - strand, within MPMX20_00912at 961.912 kb on - strand, within MPMX20_00912at 961.922 kb on + strand, within MPMX20_00912at 962.045 kb on + strandat 962.190 kb on + strand, within MPMX20_00913at 962.200 kb on + strand, within MPMX20_00913at 962.257 kb on + strand, within MPMX20_00913at 962.291 kb on + strand, within MPMX20_00913at 962.291 kb on + strand, within MPMX20_00913at 962.291 kb on + strand, within MPMX20_00913at 962.294 kb on - strand, within MPMX20_00913at 962.299 kb on - strand, within MPMX20_00913at 962.313 kb on + strand, within MPMX20_00913at 962.315 kb on + strand, within MPMX20_00913at 962.323 kb on - strand, within MPMX20_00913at 962.394 kb on + strand, within MPMX20_00913at 962.394 kb on + strand, within MPMX20_00913at 962.402 kb on - strand, within MPMX20_00913at 962.443 kb on + strand, within MPMX20_00913at 962.451 kb on - strand, within MPMX20_00913at 962.451 kb on - strand, within MPMX20_00913at 962.451 kb on - strand, within MPMX20_00913at 962.495 kb on + strand, within MPMX20_00913at 962.503 kb on - strand, within MPMX20_00913at 962.554 kb on + strand, within MPMX20_00913at 962.567 kb on - strand, within MPMX20_00913at 962.581 kb on - strand, within MPMX20_00913at 962.584 kb on + strand, within MPMX20_00913at 962.600 kb on + strand, within MPMX20_00913at 962.608 kb on - strand, within MPMX20_00913at 962.610 kb on + strand, within MPMX20_00913at 962.618 kb on - strand, within MPMX20_00913at 962.638 kb on + strand, within MPMX20_00913at 962.638 kb on + strand, within MPMX20_00913at 962.648 kb on - strand, within MPMX20_00913at 962.650 kb on + strand, within MPMX20_00913at 962.679 kb on + strand, within MPMX20_00913at 962.721 kb on + strand, within MPMX20_00913at 962.729 kb on - strand, within MPMX20_00913at 962.730 kb on + strand, within MPMX20_00913at 962.738 kb on - strandat 962.738 kb on - strandat 962.738 kb on - strandat 962.743 kb on + strandat 962.746 kb on - strandat 962.746 kb on - strandat 962.751 kb on - strandat 962.791 kb on - strandat 962.808 kb on + strandat 962.818 kb on - strandat 962.895 kb on + strandat 962.895 kb on + strandat 962.895 kb on + strandat 962.895 kb on + strandat 962.898 kb on - strandat 962.898 kb on - strandat 962.901 kb on - strandat 962.903 kb on - strandat 962.903 kb on - strandat 962.903 kb on - strandat 962.903 kb on - strandat 962.903 kb on - strandat 962.903 kb on - strandat 962.903 kb on - strandat 962.903 kb on - strandat 962.903 kb on - strandat 962.914 kb on - strandat 962.989 kb on - strandat 963.002 kb on - strandat 963.017 kb on - strandat 963.084 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (C)
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960,350 - -0.9
960,365 + -1.3
960,373 - -2.3
960,378 + -2.0
960,432 + -0.2
960,432 + -1.9
960,432 + -2.7
960,432 + -1.1
960,435 - -1.7
960,435 - -1.0
960,440 - -1.6
960,580 + +0.6
960,585 + -0.9
960,593 - +0.8
960,629 + +0.0
960,629 + -0.3
960,629 + -0.3
960,630 + +0.6
960,637 - -0.8
960,660 + +0.7
960,663 - -0.7
960,664 + +1.0
960,670 - +0.6
960,675 - -1.8
961,285 + +0.1
961,295 + +0.8
961,303 - -0.4
961,330 - -0.2
961,384 - +1.7
961,437 + MPMX20_00912 0.14 +0.4
961,456 + MPMX20_00912 0.16 +0.4
961,456 + MPMX20_00912 0.16 -0.1
961,456 + MPMX20_00912 0.16 -0.5
961,483 + MPMX20_00912 0.20 +0.4
961,514 + MPMX20_00912 0.24 +0.6
961,519 + MPMX20_00912 0.25 -1.1
961,519 + MPMX20_00912 0.25 -0.3
961,527 - MPMX20_00912 0.26 +1.3
961,527 - MPMX20_00912 0.26 +0.2
961,532 - MPMX20_00912 0.26 -1.3
961,563 - MPMX20_00912 0.30 -1.6
961,613 + MPMX20_00912 0.37 +0.3
961,641 - MPMX20_00912 0.40 +0.3
961,738 + MPMX20_00912 0.53 -0.5
961,765 - MPMX20_00912 0.57 +0.5
961,782 + MPMX20_00912 0.59 -0.3
961,810 - MPMX20_00912 0.62 -0.6
961,817 + MPMX20_00912 0.63 +0.2
961,817 + MPMX20_00912 0.63 +0.1
961,817 + MPMX20_00912 0.63 +0.2
961,825 - MPMX20_00912 0.64 +2.2
961,825 - MPMX20_00912 0.64 -3.7
961,825 - MPMX20_00912 0.64 +0.7
961,825 - MPMX20_00912 0.64 -0.3
961,842 + MPMX20_00912 0.67 +0.4
961,855 - MPMX20_00912 0.68 -2.0
961,912 - MPMX20_00912 0.76 +0.5
961,922 + MPMX20_00912 0.77 -0.4
962,045 + +0.7
962,190 + MPMX20_00913 0.16 -0.4
962,200 + MPMX20_00913 0.18 +0.6
962,257 + MPMX20_00913 0.26 -1.0
962,291 + MPMX20_00913 0.30 +0.3
962,291 + MPMX20_00913 0.30 +1.6
962,291 + MPMX20_00913 0.30 +0.1
962,294 - MPMX20_00913 0.30 +0.1
962,299 - MPMX20_00913 0.31 +0.6
962,313 + MPMX20_00913 0.33 -0.3
962,315 + MPMX20_00913 0.33 -2.2
962,323 - MPMX20_00913 0.34 -2.0
962,394 + MPMX20_00913 0.44 -1.1
962,394 + MPMX20_00913 0.44 -0.8
962,402 - MPMX20_00913 0.45 +0.6
962,443 + MPMX20_00913 0.51 -1.1
962,451 - MPMX20_00913 0.52 -0.5
962,451 - MPMX20_00913 0.52 +0.5
962,451 - MPMX20_00913 0.52 +1.0
962,495 + MPMX20_00913 0.58 +1.4
962,503 - MPMX20_00913 0.59 -0.6
962,554 + MPMX20_00913 0.66 -0.8
962,567 - MPMX20_00913 0.67 -0.7
962,581 - MPMX20_00913 0.69 +0.2
962,584 + MPMX20_00913 0.70 -0.3
962,600 + MPMX20_00913 0.72 +1.0
962,608 - MPMX20_00913 0.73 -0.5
962,610 + MPMX20_00913 0.73 -1.8
962,618 - MPMX20_00913 0.74 +1.1
962,638 + MPMX20_00913 0.77 -0.1
962,638 + MPMX20_00913 0.77 +0.7
962,648 - MPMX20_00913 0.78 -0.9
962,650 + MPMX20_00913 0.79 -0.2
962,679 + MPMX20_00913 0.82 +0.4
962,721 + MPMX20_00913 0.88 +0.7
962,729 - MPMX20_00913 0.89 -0.7
962,730 + MPMX20_00913 0.89 +0.8
962,738 - +1.0
962,738 - +0.9
962,738 - +0.0
962,743 + +1.1
962,746 - +0.2
962,746 - +0.9
962,751 - +0.3
962,791 - -1.6
962,808 + -2.1
962,818 - +0.4
962,895 + +0.3
962,895 + +0.1
962,895 + +1.6
962,895 + +0.4
962,898 - +1.9
962,898 - +0.5
962,901 - -1.0
962,903 - -1.3
962,903 - -1.2
962,903 - +0.6
962,903 - +0.4
962,903 - +0.2
962,903 - -1.6
962,903 - +0.1
962,903 - +0.4
962,903 - -0.6
962,914 - -0.4
962,989 - +0.5
963,002 - +0.4
963,017 - +1.7
963,084 - +1.0

Or see this region's nucleotide sequence