Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04455

Experiment: L-Aspartic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04453 and MPMX20_04454 are separated by 82 nucleotidesMPMX20_04454 and MPMX20_04455 are separated by 32 nucleotidesMPMX20_04455 and MPMX20_04456 are separated by 109 nucleotidesMPMX20_04456 and MPMX20_04457 overlap by 4 nucleotides MPMX20_04453: MPMX20_04453 - Biotin transporter, at 4,656,656 to 4,657,555 _04453 MPMX20_04454: MPMX20_04454 - Pyridoxal phosphate phosphatase YigL, at 4,657,638 to 4,658,438 _04454 MPMX20_04455: MPMX20_04455 - Lysophospholipase L2, at 4,658,471 to 4,659,463 _04455 MPMX20_04456: MPMX20_04456 - Homoserine/homoserine lactone efflux protein, at 4,659,573 to 4,660,193 _04456 MPMX20_04457: MPMX20_04457 - Threonine efflux protein, at 4,660,190 to 4,660,810 _04457 Position (kb) 4658 4659 4660Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4657.492 kb on + strandat 4657.493 kb on + strandat 4657.515 kb on - strandat 4657.515 kb on - strandat 4657.521 kb on + strandat 4657.528 kb on + strandat 4657.529 kb on - strandat 4657.536 kb on - strandat 4657.592 kb on - strandat 4657.692 kb on - strandat 4657.733 kb on + strand, within MPMX20_04454at 4657.838 kb on - strand, within MPMX20_04454at 4657.848 kb on + strand, within MPMX20_04454at 4657.856 kb on + strand, within MPMX20_04454at 4657.899 kb on + strand, within MPMX20_04454at 4657.907 kb on - strand, within MPMX20_04454at 4657.941 kb on - strand, within MPMX20_04454at 4657.941 kb on - strand, within MPMX20_04454at 4658.027 kb on + strand, within MPMX20_04454at 4658.027 kb on + strand, within MPMX20_04454at 4658.027 kb on + strand, within MPMX20_04454at 4658.035 kb on - strand, within MPMX20_04454at 4658.040 kb on - strand, within MPMX20_04454at 4658.156 kb on - strand, within MPMX20_04454at 4658.156 kb on - strand, within MPMX20_04454at 4658.156 kb on - strand, within MPMX20_04454at 4658.156 kb on - strand, within MPMX20_04454at 4658.158 kb on + strand, within MPMX20_04454at 4658.166 kb on - strand, within MPMX20_04454at 4658.166 kb on - strand, within MPMX20_04454at 4658.188 kb on + strand, within MPMX20_04454at 4658.232 kb on - strand, within MPMX20_04454at 4658.234 kb on - strand, within MPMX20_04454at 4658.335 kb on + strand, within MPMX20_04454at 4658.381 kb on + strandat 4658.381 kb on + strandat 4658.381 kb on + strandat 4658.381 kb on + strandat 4658.381 kb on + strandat 4658.381 kb on + strandat 4658.381 kb on + strandat 4658.381 kb on + strandat 4658.381 kb on + strandat 4658.381 kb on + strandat 4658.381 kb on + strandat 4658.381 kb on + strandat 4658.389 kb on - strandat 4658.400 kb on - strandat 4658.412 kb on - strandat 4658.594 kb on - strand, within MPMX20_04455at 4658.637 kb on + strand, within MPMX20_04455at 4658.639 kb on + strand, within MPMX20_04455at 4658.879 kb on + strand, within MPMX20_04455at 4658.879 kb on + strand, within MPMX20_04455at 4658.932 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.042 kb on + strand, within MPMX20_04455at 4659.050 kb on - strand, within MPMX20_04455at 4659.050 kb on - strand, within MPMX20_04455at 4659.050 kb on - strand, within MPMX20_04455at 4659.050 kb on - strand, within MPMX20_04455at 4659.050 kb on - strand, within MPMX20_04455at 4659.050 kb on - strand, within MPMX20_04455at 4659.050 kb on - strand, within MPMX20_04455at 4659.148 kb on - strand, within MPMX20_04455at 4659.222 kb on - strand, within MPMX20_04455at 4659.235 kb on + strand, within MPMX20_04455at 4659.243 kb on - strand, within MPMX20_04455at 4659.243 kb on - strand, within MPMX20_04455at 4659.285 kb on - strand, within MPMX20_04455at 4659.285 kb on - strand, within MPMX20_04455at 4659.577 kb on + strandat 4659.616 kb on + strandat 4659.616 kb on + strandat 4659.624 kb on - strandat 4659.624 kb on - strandat 4659.624 kb on - strandat 4659.624 kb on - strandat 4659.625 kb on - strandat 4659.717 kb on + strand, within MPMX20_04456at 4659.785 kb on - strand, within MPMX20_04456at 4659.785 kb on - strand, within MPMX20_04456at 4659.797 kb on + strand, within MPMX20_04456at 4659.832 kb on + strand, within MPMX20_04456at 4659.840 kb on - strand, within MPMX20_04456at 4659.845 kb on - strand, within MPMX20_04456at 4659.927 kb on + strand, within MPMX20_04456at 4659.935 kb on - strand, within MPMX20_04456at 4659.985 kb on - strand, within MPMX20_04456at 4660.002 kb on - strand, within MPMX20_04456at 4660.003 kb on - strand, within MPMX20_04456at 4660.003 kb on - strand, within MPMX20_04456at 4660.003 kb on - strand, within MPMX20_04456at 4660.092 kb on - strand, within MPMX20_04456at 4660.096 kb on + strand, within MPMX20_04456at 4660.104 kb on - strand, within MPMX20_04456at 4660.105 kb on + strand, within MPMX20_04456at 4660.123 kb on - strand, within MPMX20_04456at 4660.123 kb on - strand, within MPMX20_04456at 4660.130 kb on - strand, within MPMX20_04456at 4660.165 kb on - strandat 4660.275 kb on + strand, within MPMX20_04457at 4660.295 kb on + strand, within MPMX20_04457at 4660.322 kb on - strand, within MPMX20_04457at 4660.323 kb on - strand, within MPMX20_04457at 4660.356 kb on - strand, within MPMX20_04457at 4660.356 kb on - strand, within MPMX20_04457at 4660.377 kb on + strand, within MPMX20_04457at 4660.385 kb on - strand, within MPMX20_04457

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (C)
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4,657,492 + -0.3
4,657,493 + +0.2
4,657,515 - +0.4
4,657,515 - -0.8
4,657,521 + +0.9
4,657,528 + -1.5
4,657,529 - +0.3
4,657,536 - +0.8
4,657,592 - -0.3
4,657,692 - -2.6
4,657,733 + MPMX20_04454 0.12 -0.0
4,657,838 - MPMX20_04454 0.25 +0.0
4,657,848 + MPMX20_04454 0.26 -1.2
4,657,856 + MPMX20_04454 0.27 -0.4
4,657,899 + MPMX20_04454 0.33 -0.8
4,657,907 - MPMX20_04454 0.34 +0.1
4,657,941 - MPMX20_04454 0.38 +0.0
4,657,941 - MPMX20_04454 0.38 +0.5
4,658,027 + MPMX20_04454 0.49 +0.1
4,658,027 + MPMX20_04454 0.49 +0.1
4,658,027 + MPMX20_04454 0.49 +0.2
4,658,035 - MPMX20_04454 0.50 +0.3
4,658,040 - MPMX20_04454 0.50 +0.7
4,658,156 - MPMX20_04454 0.65 -0.1
4,658,156 - MPMX20_04454 0.65 -1.3
4,658,156 - MPMX20_04454 0.65 +1.4
4,658,156 - MPMX20_04454 0.65 +0.7
4,658,158 + MPMX20_04454 0.65 -0.4
4,658,166 - MPMX20_04454 0.66 -0.4
4,658,166 - MPMX20_04454 0.66 +0.2
4,658,188 + MPMX20_04454 0.69 +0.1
4,658,232 - MPMX20_04454 0.74 +2.1
4,658,234 - MPMX20_04454 0.74 -1.3
4,658,335 + MPMX20_04454 0.87 -0.0
4,658,381 + -1.6
4,658,381 + +1.2
4,658,381 + +0.3
4,658,381 + -0.6
4,658,381 + +0.5
4,658,381 + -0.2
4,658,381 + +0.4
4,658,381 + -0.9
4,658,381 + +0.8
4,658,381 + +0.3
4,658,381 + +0.0
4,658,381 + +1.5
4,658,389 - +0.9
4,658,400 - -0.4
4,658,412 - +1.2
4,658,594 - MPMX20_04455 0.12 -2.0
4,658,637 + MPMX20_04455 0.17 +1.4
4,658,639 + MPMX20_04455 0.17 -0.8
4,658,879 + MPMX20_04455 0.41 +1.6
4,658,879 + MPMX20_04455 0.41 +0.3
4,658,932 + MPMX20_04455 0.46 +0.9
4,659,042 + MPMX20_04455 0.58 +1.1
4,659,042 + MPMX20_04455 0.58 -1.9
4,659,042 + MPMX20_04455 0.58 -0.4
4,659,042 + MPMX20_04455 0.58 +4.2
4,659,042 + MPMX20_04455 0.58 +0.8
4,659,042 + MPMX20_04455 0.58 -1.2
4,659,042 + MPMX20_04455 0.58 +1.8
4,659,042 + MPMX20_04455 0.58 +1.6
4,659,042 + MPMX20_04455 0.58 +2.1
4,659,042 + MPMX20_04455 0.58 +0.1
4,659,042 + MPMX20_04455 0.58 +0.4
4,659,042 + MPMX20_04455 0.58 -0.5
4,659,050 - MPMX20_04455 0.58 +1.1
4,659,050 - MPMX20_04455 0.58 -1.2
4,659,050 - MPMX20_04455 0.58 -1.3
4,659,050 - MPMX20_04455 0.58 +1.1
4,659,050 - MPMX20_04455 0.58 +1.7
4,659,050 - MPMX20_04455 0.58 -1.0
4,659,050 - MPMX20_04455 0.58 +0.8
4,659,148 - MPMX20_04455 0.68 +0.9
4,659,222 - MPMX20_04455 0.76 +1.3
4,659,235 + MPMX20_04455 0.77 -0.6
4,659,243 - MPMX20_04455 0.78 +1.2
4,659,243 - MPMX20_04455 0.78 +0.5
4,659,285 - MPMX20_04455 0.82 +0.4
4,659,285 - MPMX20_04455 0.82 +0.9
4,659,577 + +0.0
4,659,616 + +0.2
4,659,616 + -0.6
4,659,624 - -1.0
4,659,624 - -0.6
4,659,624 - +0.6
4,659,624 - -2.9
4,659,625 - -0.0
4,659,717 + MPMX20_04456 0.23 +1.7
4,659,785 - MPMX20_04456 0.34 -0.1
4,659,785 - MPMX20_04456 0.34 +0.0
4,659,797 + MPMX20_04456 0.36 -0.3
4,659,832 + MPMX20_04456 0.42 +0.2
4,659,840 - MPMX20_04456 0.43 +0.8
4,659,845 - MPMX20_04456 0.44 +0.4
4,659,927 + MPMX20_04456 0.57 +1.3
4,659,935 - MPMX20_04456 0.58 +0.2
4,659,985 - MPMX20_04456 0.66 +1.2
4,660,002 - MPMX20_04456 0.69 +0.1
4,660,003 - MPMX20_04456 0.69 +0.2
4,660,003 - MPMX20_04456 0.69 +0.6
4,660,003 - MPMX20_04456 0.69 -0.5
4,660,092 - MPMX20_04456 0.84 -0.6
4,660,096 + MPMX20_04456 0.84 +0.7
4,660,104 - MPMX20_04456 0.86 -1.2
4,660,105 + MPMX20_04456 0.86 +0.9
4,660,123 - MPMX20_04456 0.89 -1.1
4,660,123 - MPMX20_04456 0.89 +0.1
4,660,130 - MPMX20_04456 0.90 -1.7
4,660,165 - +1.2
4,660,275 + MPMX20_04457 0.14 -1.0
4,660,295 + MPMX20_04457 0.17 +0.1
4,660,322 - MPMX20_04457 0.21 +1.7
4,660,323 - MPMX20_04457 0.21 +0.5
4,660,356 - MPMX20_04457 0.27 -0.4
4,660,356 - MPMX20_04457 0.27 -0.6
4,660,377 + MPMX20_04457 0.30 +0.4
4,660,385 - MPMX20_04457 0.31 +1.4

Or see this region's nucleotide sequence