Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04052

Experiment: L-Aspartic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04051 and MPMX20_04052 overlap by 43 nucleotidesMPMX20_04052 and MPMX20_04053 are separated by 21 nucleotidesMPMX20_04053 and MPMX20_04054 are separated by 9 nucleotides MPMX20_04051: MPMX20_04051 - Penicillin-binding protein activator LpoA, at 4,249,988 to 4,252,234 _04051 MPMX20_04052: MPMX20_04052 - hypothetical protein, at 4,252,192 to 4,252,587 _04052 MPMX20_04053: MPMX20_04053 - DnaA initiator-associating protein DiaA, at 4,252,609 to 4,253,199 _04053 MPMX20_04054: MPMX20_04054 - Osmotically-inducible protein Y, at 4,253,209 to 4,253,784 _04054 Position (kb) 4252 4253Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4251.250 kb on - strand, within MPMX20_04051at 4251.259 kb on + strand, within MPMX20_04051at 4251.267 kb on - strand, within MPMX20_04051at 4251.286 kb on - strand, within MPMX20_04051at 4251.336 kb on - strand, within MPMX20_04051at 4251.391 kb on + strand, within MPMX20_04051at 4251.400 kb on - strand, within MPMX20_04051at 4251.429 kb on - strand, within MPMX20_04051at 4251.437 kb on + strand, within MPMX20_04051at 4251.445 kb on - strand, within MPMX20_04051at 4251.445 kb on - strand, within MPMX20_04051at 4251.520 kb on + strand, within MPMX20_04051at 4251.520 kb on + strand, within MPMX20_04051at 4251.520 kb on + strand, within MPMX20_04051at 4251.520 kb on + strand, within MPMX20_04051at 4251.520 kb on + strand, within MPMX20_04051at 4251.520 kb on + strand, within MPMX20_04051at 4251.528 kb on - strand, within MPMX20_04051at 4251.528 kb on - strand, within MPMX20_04051at 4251.528 kb on - strand, within MPMX20_04051at 4251.529 kb on - strand, within MPMX20_04051at 4251.547 kb on - strand, within MPMX20_04051at 4251.645 kb on + strand, within MPMX20_04051at 4251.645 kb on + strand, within MPMX20_04051at 4251.645 kb on + strand, within MPMX20_04051at 4251.653 kb on - strand, within MPMX20_04051at 4251.653 kb on - strand, within MPMX20_04051at 4251.653 kb on - strand, within MPMX20_04051at 4251.653 kb on - strand, within MPMX20_04051at 4251.694 kb on - strand, within MPMX20_04051at 4251.716 kb on - strand, within MPMX20_04051at 4251.716 kb on - strand, within MPMX20_04051at 4251.740 kb on - strand, within MPMX20_04051at 4251.751 kb on + strand, within MPMX20_04051at 4251.751 kb on + strand, within MPMX20_04051at 4251.799 kb on + strand, within MPMX20_04051at 4251.817 kb on - strand, within MPMX20_04051at 4251.817 kb on - strand, within MPMX20_04051at 4251.865 kb on + strand, within MPMX20_04051at 4251.870 kb on + strand, within MPMX20_04051at 4251.873 kb on - strand, within MPMX20_04051at 4251.873 kb on - strand, within MPMX20_04051at 4251.875 kb on + strand, within MPMX20_04051at 4251.893 kb on + strand, within MPMX20_04051at 4251.901 kb on - strand, within MPMX20_04051at 4251.901 kb on - strand, within MPMX20_04051at 4251.902 kb on + strand, within MPMX20_04051at 4251.914 kb on + strand, within MPMX20_04051at 4251.924 kb on + strand, within MPMX20_04051at 4252.004 kb on - strand, within MPMX20_04051at 4252.122 kb on + strandat 4252.123 kb on - strandat 4252.130 kb on - strandat 4252.160 kb on + strandat 4252.165 kb on + strandat 4252.294 kb on + strand, within MPMX20_04052at 4252.302 kb on - strand, within MPMX20_04052at 4252.366 kb on + strand, within MPMX20_04052at 4252.420 kb on + strand, within MPMX20_04052at 4252.425 kb on - strand, within MPMX20_04052at 4252.470 kb on + strand, within MPMX20_04052at 4252.478 kb on - strand, within MPMX20_04052at 4252.478 kb on - strand, within MPMX20_04052at 4252.478 kb on - strand, within MPMX20_04052at 4252.505 kb on - strand, within MPMX20_04052at 4252.525 kb on + strand, within MPMX20_04052at 4252.609 kb on - strandat 4252.644 kb on + strandat 4252.664 kb on - strandat 4252.664 kb on - strandat 4252.666 kb on + strandat 4252.728 kb on - strand, within MPMX20_04053at 4252.855 kb on + strand, within MPMX20_04053at 4252.860 kb on + strand, within MPMX20_04053at 4252.868 kb on - strand, within MPMX20_04053at 4252.921 kb on + strand, within MPMX20_04053at 4252.929 kb on - strand, within MPMX20_04053at 4252.929 kb on - strand, within MPMX20_04053at 4252.955 kb on + strand, within MPMX20_04053at 4252.971 kb on - strand, within MPMX20_04053at 4252.981 kb on - strand, within MPMX20_04053at 4253.046 kb on - strand, within MPMX20_04053at 4253.118 kb on + strand, within MPMX20_04053at 4253.118 kb on + strand, within MPMX20_04053at 4253.126 kb on - strand, within MPMX20_04053at 4253.216 kb on - strandat 4253.233 kb on + strandat 4253.233 kb on + strandat 4253.241 kb on - strandat 4253.354 kb on + strand, within MPMX20_04054at 4253.373 kb on - strand, within MPMX20_04054at 4253.375 kb on - strand, within MPMX20_04054at 4253.385 kb on - strand, within MPMX20_04054at 4253.476 kb on + strand, within MPMX20_04054at 4253.484 kb on - strand, within MPMX20_04054at 4253.494 kb on - strand, within MPMX20_04054at 4253.555 kb on + strand, within MPMX20_04054at 4253.573 kb on - strand, within MPMX20_04054

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (C)
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4,251,250 - MPMX20_04051 0.56 -0.0
4,251,259 + MPMX20_04051 0.57 +0.6
4,251,267 - MPMX20_04051 0.57 -0.3
4,251,286 - MPMX20_04051 0.58 -1.2
4,251,336 - MPMX20_04051 0.60 -0.2
4,251,391 + MPMX20_04051 0.62 +0.5
4,251,400 - MPMX20_04051 0.63 +1.0
4,251,429 - MPMX20_04051 0.64 -0.7
4,251,437 + MPMX20_04051 0.64 +0.4
4,251,445 - MPMX20_04051 0.65 -0.7
4,251,445 - MPMX20_04051 0.65 +0.7
4,251,520 + MPMX20_04051 0.68 -0.4
4,251,520 + MPMX20_04051 0.68 -1.0
4,251,520 + MPMX20_04051 0.68 -0.7
4,251,520 + MPMX20_04051 0.68 +1.2
4,251,520 + MPMX20_04051 0.68 -1.0
4,251,520 + MPMX20_04051 0.68 +0.1
4,251,528 - MPMX20_04051 0.69 -0.7
4,251,528 - MPMX20_04051 0.69 -0.2
4,251,528 - MPMX20_04051 0.69 -0.8
4,251,529 - MPMX20_04051 0.69 +1.6
4,251,547 - MPMX20_04051 0.69 +2.1
4,251,645 + MPMX20_04051 0.74 -2.5
4,251,645 + MPMX20_04051 0.74 +0.2
4,251,645 + MPMX20_04051 0.74 +0.3
4,251,653 - MPMX20_04051 0.74 +0.3
4,251,653 - MPMX20_04051 0.74 +0.7
4,251,653 - MPMX20_04051 0.74 -2.8
4,251,653 - MPMX20_04051 0.74 +0.7
4,251,694 - MPMX20_04051 0.76 +0.4
4,251,716 - MPMX20_04051 0.77 -1.0
4,251,716 - MPMX20_04051 0.77 -0.0
4,251,740 - MPMX20_04051 0.78 -1.6
4,251,751 + MPMX20_04051 0.78 +1.0
4,251,751 + MPMX20_04051 0.78 +0.2
4,251,799 + MPMX20_04051 0.81 +0.6
4,251,817 - MPMX20_04051 0.81 -0.3
4,251,817 - MPMX20_04051 0.81 -0.6
4,251,865 + MPMX20_04051 0.84 +0.0
4,251,870 + MPMX20_04051 0.84 +0.1
4,251,873 - MPMX20_04051 0.84 +0.2
4,251,873 - MPMX20_04051 0.84 -0.0
4,251,875 + MPMX20_04051 0.84 +0.9
4,251,893 + MPMX20_04051 0.85 +0.9
4,251,901 - MPMX20_04051 0.85 -0.3
4,251,901 - MPMX20_04051 0.85 -2.0
4,251,902 + MPMX20_04051 0.85 -1.3
4,251,914 + MPMX20_04051 0.86 +1.4
4,251,924 + MPMX20_04051 0.86 -0.3
4,252,004 - MPMX20_04051 0.90 +0.8
4,252,122 + +0.1
4,252,123 - +0.6
4,252,130 - -0.0
4,252,160 + +0.5
4,252,165 + -0.9
4,252,294 + MPMX20_04052 0.26 -0.1
4,252,302 - MPMX20_04052 0.28 -0.3
4,252,366 + MPMX20_04052 0.44 -0.3
4,252,420 + MPMX20_04052 0.58 +0.0
4,252,425 - MPMX20_04052 0.59 +1.1
4,252,470 + MPMX20_04052 0.70 -0.6
4,252,478 - MPMX20_04052 0.72 +1.6
4,252,478 - MPMX20_04052 0.72 +1.4
4,252,478 - MPMX20_04052 0.72 +1.5
4,252,505 - MPMX20_04052 0.79 -0.8
4,252,525 + MPMX20_04052 0.84 +0.6
4,252,609 - -1.2
4,252,644 + -2.0
4,252,664 - +0.1
4,252,664 - +0.4
4,252,666 + +0.2
4,252,728 - MPMX20_04053 0.20 -0.9
4,252,855 + MPMX20_04053 0.42 +0.3
4,252,860 + MPMX20_04053 0.42 -1.5
4,252,868 - MPMX20_04053 0.44 +0.4
4,252,921 + MPMX20_04053 0.53 +0.6
4,252,929 - MPMX20_04053 0.54 -0.3
4,252,929 - MPMX20_04053 0.54 +1.2
4,252,955 + MPMX20_04053 0.59 -2.8
4,252,971 - MPMX20_04053 0.61 +0.8
4,252,981 - MPMX20_04053 0.63 -0.8
4,253,046 - MPMX20_04053 0.74 +0.7
4,253,118 + MPMX20_04053 0.86 +0.7
4,253,118 + MPMX20_04053 0.86 +0.8
4,253,126 - MPMX20_04053 0.87 +0.6
4,253,216 - -0.6
4,253,233 + -0.3
4,253,233 + +0.1
4,253,241 - +0.5
4,253,354 + MPMX20_04054 0.25 +2.1
4,253,373 - MPMX20_04054 0.28 -1.4
4,253,375 - MPMX20_04054 0.29 +0.7
4,253,385 - MPMX20_04054 0.31 -0.7
4,253,476 + MPMX20_04054 0.46 +0.6
4,253,484 - MPMX20_04054 0.48 -1.0
4,253,494 - MPMX20_04054 0.49 +0.3
4,253,555 + MPMX20_04054 0.60 -0.2
4,253,573 - MPMX20_04054 0.63 -0.4

Or see this region's nucleotide sequence