Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02469 and MPMX20_02470 are separated by 12 nucleotides MPMX20_02470 and MPMX20_02471 overlap by 1 nucleotides MPMX20_02471 and MPMX20_02472 are separated by 54 nucleotides MPMX20_02472 and MPMX20_02473 are separated by 166 nucleotides
MPMX20_02469: MPMX20_02469 - Phage shock protein D, at 2,611,206 to 2,611,430
_02469
MPMX20_02470: MPMX20_02470 - Phage shock protein C, at 2,611,443 to 2,611,802
_02470
MPMX20_02471: MPMX20_02471 - Phage shock protein B, at 2,611,802 to 2,612,026
_02471
MPMX20_02472: MPMX20_02472 - Phage shock protein A, at 2,612,081 to 2,612,749
_02472
MPMX20_02473: MPMX20_02473 - Psp operon transcriptional activator, at 2,612,916 to 2,613,893
_02473
Position (kb)
2612
2613 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2611.104 kb on - strand at 2611.104 kb on - strand at 2611.104 kb on - strand at 2611.104 kb on - strand at 2611.104 kb on - strand at 2611.104 kb on - strand at 2611.104 kb on - strand at 2611.104 kb on - strand at 2611.104 kb on - strand at 2611.104 kb on - strand at 2611.104 kb on - strand at 2611.111 kb on + strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.114 kb on - strand at 2611.119 kb on - strand at 2611.119 kb on - strand at 2611.124 kb on - strand at 2611.124 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.126 kb on - strand at 2611.150 kb on - strand at 2611.163 kb on - strand at 2611.169 kb on - strand at 2611.169 kb on - strand at 2611.169 kb on - strand at 2611.169 kb on - strand at 2611.174 kb on - strand at 2611.174 kb on - strand at 2611.174 kb on - strand at 2611.174 kb on - strand at 2611.174 kb on - strand at 2611.174 kb on - strand at 2611.174 kb on - strand at 2611.174 kb on - strand at 2611.187 kb on + strand at 2611.188 kb on + strand at 2611.188 kb on + strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.196 kb on - strand at 2611.196 kb on - strand at 2611.196 kb on - strand at 2611.196 kb on - strand at 2611.196 kb on - strand at 2611.196 kb on - strand at 2611.196 kb on - strand at 2611.196 kb on - strand at 2611.196 kb on - strand at 2611.196 kb on - strand at 2611.196 kb on - strand at 2611.219 kb on - strand at 2611.224 kb on - strand at 2611.259 kb on - strand, within MPMX20_02469 at 2611.266 kb on - strand, within MPMX20_02469 at 2611.266 kb on - strand, within MPMX20_02469 at 2611.273 kb on + strand, within MPMX20_02469 at 2611.285 kb on - strand, within MPMX20_02469 at 2611.285 kb on - strand, within MPMX20_02469 at 2611.309 kb on + strand, within MPMX20_02469 at 2611.309 kb on - strand, within MPMX20_02469 at 2611.352 kb on - strand, within MPMX20_02469 at 2611.357 kb on + strand, within MPMX20_02469 at 2611.359 kb on - strand, within MPMX20_02469 at 2611.369 kb on - strand, within MPMX20_02469 at 2611.373 kb on - strand, within MPMX20_02469 at 2611.397 kb on - strand, within MPMX20_02469 at 2611.398 kb on - strand, within MPMX20_02469 at 2611.398 kb on - strand, within MPMX20_02469 at 2611.419 kb on + strand at 2611.440 kb on + strand at 2611.469 kb on + strand at 2611.469 kb on + strand at 2611.477 kb on - strand at 2611.486 kb on - strand, within MPMX20_02470 at 2611.515 kb on + strand, within MPMX20_02470 at 2611.520 kb on + strand, within MPMX20_02470 at 2611.523 kb on - strand, within MPMX20_02470 at 2611.564 kb on - strand, within MPMX20_02470 at 2611.630 kb on + strand, within MPMX20_02470 at 2611.673 kb on + strand, within MPMX20_02470 at 2611.679 kb on + strand, within MPMX20_02470 at 2611.687 kb on - strand, within MPMX20_02470 at 2611.715 kb on + strand, within MPMX20_02470 at 2611.727 kb on + strand, within MPMX20_02470 at 2611.727 kb on + strand, within MPMX20_02470 at 2611.727 kb on + strand, within MPMX20_02470 at 2611.727 kb on + strand, within MPMX20_02470 at 2611.735 kb on - strand, within MPMX20_02470 at 2611.735 kb on - strand, within MPMX20_02470 at 2611.755 kb on + strand, within MPMX20_02470 at 2611.787 kb on + strand at 2611.891 kb on + strand, within MPMX20_02471 at 2611.894 kb on + strand, within MPMX20_02471 at 2611.899 kb on - strand, within MPMX20_02471 at 2611.914 kb on - strand, within MPMX20_02471 at 2611.940 kb on - strand, within MPMX20_02471 at 2611.947 kb on + strand, within MPMX20_02471 at 2612.024 kb on + strand at 2612.026 kb on + strand at 2612.034 kb on - strand at 2612.038 kb on + strand at 2612.040 kb on + strand at 2612.046 kb on - strand at 2612.154 kb on - strand, within MPMX20_02472 at 2612.164 kb on + strand, within MPMX20_02472 at 2612.206 kb on - strand, within MPMX20_02472 at 2612.241 kb on - strand, within MPMX20_02472 at 2612.269 kb on + strand, within MPMX20_02472 at 2612.269 kb on + strand, within MPMX20_02472 at 2612.484 kb on + strand, within MPMX20_02472 at 2612.484 kb on + strand, within MPMX20_02472 at 2612.492 kb on - strand, within MPMX20_02472 at 2612.513 kb on - strand, within MPMX20_02472 at 2612.549 kb on - strand, within MPMX20_02472 at 2612.558 kb on + strand, within MPMX20_02472 at 2612.561 kb on - strand, within MPMX20_02472 at 2612.563 kb on + strand, within MPMX20_02472 at 2612.571 kb on - strand, within MPMX20_02472 at 2612.698 kb on - strand at 2612.698 kb on - strand at 2612.968 kb on + strand at 2612.986 kb on - strand at 2613.090 kb on - strand, within MPMX20_02473 at 2613.099 kb on + strand, within MPMX20_02473 at 2613.099 kb on + strand, within MPMX20_02473 at 2613.109 kb on - strand, within MPMX20_02473 at 2613.153 kb on + strand, within MPMX20_02473 at 2613.342 kb on + strand, within MPMX20_02473 at 2613.350 kb on - strand, within MPMX20_02473 at 2613.350 kb on - strand, within MPMX20_02473 at 2613.350 kb on - strand, within MPMX20_02473 at 2613.377 kb on + strand, within MPMX20_02473 at 2613.435 kb on + strand, within MPMX20_02473 at 2613.443 kb on - strand, within MPMX20_02473 at 2613.483 kb on + strand, within MPMX20_02473 at 2613.511 kb on - strand, within MPMX20_02473 at 2613.558 kb on - strand, within MPMX20_02473 at 2613.619 kb on + strand, within MPMX20_02473 at 2613.624 kb on + strand, within MPMX20_02473 at 2613.626 kb on - strand, within MPMX20_02473 at 2613.662 kb on + strand, within MPMX20_02473 at 2613.662 kb on + strand, within MPMX20_02473 at 2613.723 kb on - strand, within MPMX20_02473 at 2613.724 kb on - strand, within MPMX20_02473 at 2613.724 kb on - strand, within MPMX20_02473 at 2613.727 kb on + strand, within MPMX20_02473
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 2,611,104 - +0.2 2,611,104 - +0.6 2,611,104 - -1.1 2,611,104 - +0.1 2,611,104 - -1.4 2,611,104 - +0.1 2,611,104 - -1.0 2,611,104 - -2.2 2,611,104 - -0.8 2,611,104 - +1.4 2,611,104 - +0.6 2,611,111 + +0.2 2,611,114 - -0.7 2,611,114 - +0.3 2,611,114 - -0.8 2,611,114 - +0.5 2,611,114 - -1.0 2,611,114 - -1.3 2,611,114 - -0.8 2,611,114 - -0.9 2,611,114 - -1.0 2,611,114 - -0.3 2,611,114 - +1.4 2,611,114 - +0.2 2,611,114 - -1.4 2,611,114 - -0.2 2,611,114 - +0.5 2,611,114 - -0.9 2,611,114 - -0.7 2,611,119 - +0.4 2,611,119 - -0.5 2,611,124 - -1.6 2,611,124 - -0.5 2,611,126 - -0.3 2,611,126 - -2.7 2,611,126 - +1.0 2,611,126 - +0.5 2,611,126 - -0.7 2,611,126 - -3.6 2,611,126 - +0.7 2,611,126 - +1.4 2,611,126 - +0.5 2,611,126 - +0.0 2,611,126 - -0.7 2,611,126 - -2.1 2,611,126 - +0.4 2,611,126 - +3.5 2,611,126 - +0.3 2,611,126 - +0.1 2,611,126 - +0.2 2,611,126 - +3.4 2,611,126 - -2.0 2,611,126 - -1.4 2,611,126 - +0.8 2,611,126 - -0.1 2,611,126 - +0.8 2,611,126 - +0.2 2,611,126 - -0.7 2,611,126 - -0.4 2,611,126 - +3.2 2,611,126 - -1.1 2,611,126 - +0.0 2,611,126 - -0.0 2,611,126 - -1.1 2,611,126 - -1.1 2,611,126 - -0.3 2,611,126 - +0.4 2,611,126 - +1.3 2,611,126 - +0.3 2,611,126 - -1.6 2,611,150 - -0.6 2,611,163 - -0.6 2,611,169 - +0.2 2,611,169 - -1.1 2,611,169 - -1.7 2,611,169 - -1.2 2,611,174 - +1.3 2,611,174 - +2.1 2,611,174 - -0.8 2,611,174 - +0.5 2,611,174 - -0.2 2,611,174 - +0.8 2,611,174 - -1.8 2,611,174 - -0.1 2,611,187 + -0.0 2,611,188 + -0.5 2,611,188 + -1.7 2,611,195 - -0.9 2,611,195 - +0.6 2,611,195 - +0.8 2,611,195 - +0.8 2,611,195 - -1.8 2,611,195 - -2.0 2,611,195 - +0.9 2,611,195 - +0.2 2,611,195 - -0.0 2,611,195 - -1.1 2,611,195 - +0.8 2,611,195 - +0.4 2,611,195 - -0.3 2,611,195 - +1.0 2,611,195 - -1.6 2,611,195 - -0.5 2,611,195 - -0.0 2,611,195 - +0.5 2,611,195 - +0.4 2,611,195 - +0.4 2,611,195 - -0.5 2,611,195 - -1.7 2,611,195 - +0.9 2,611,196 - -1.0 2,611,196 - +0.2 2,611,196 - +0.4 2,611,196 - +1.7 2,611,196 - -2.0 2,611,196 - -0.5 2,611,196 - +0.6 2,611,196 - +0.4 2,611,196 - +0.6 2,611,196 - -0.4 2,611,196 - +0.3 2,611,219 - +0.0 2,611,224 - +1.4 2,611,259 - MPMX20_02469 0.24 -1.8 2,611,266 - MPMX20_02469 0.27 +0.8 2,611,266 - MPMX20_02469 0.27 -0.8 2,611,273 + MPMX20_02469 0.30 +0.2 2,611,285 - MPMX20_02469 0.35 -0.0 2,611,285 - MPMX20_02469 0.35 -0.4 2,611,309 + MPMX20_02469 0.46 +2.6 2,611,309 - MPMX20_02469 0.46 -0.1 2,611,352 - MPMX20_02469 0.65 +0.9 2,611,357 + MPMX20_02469 0.67 -0.3 2,611,359 - MPMX20_02469 0.68 +1.1 2,611,369 - MPMX20_02469 0.72 +1.2 2,611,373 - MPMX20_02469 0.74 +1.6 2,611,397 - MPMX20_02469 0.85 +1.4 2,611,398 - MPMX20_02469 0.85 -0.2 2,611,398 - MPMX20_02469 0.85 +0.4 2,611,419 + +0.1 2,611,440 + -2.3 2,611,469 + -0.9 2,611,469 + +0.3 2,611,477 - +0.9 2,611,486 - MPMX20_02470 0.12 -1.2 2,611,515 + MPMX20_02470 0.20 +0.3 2,611,520 + MPMX20_02470 0.21 +0.2 2,611,523 - MPMX20_02470 0.22 -2.4 2,611,564 - MPMX20_02470 0.34 -0.5 2,611,630 + MPMX20_02470 0.52 +1.0 2,611,673 + MPMX20_02470 0.64 -1.6 2,611,679 + MPMX20_02470 0.66 +1.4 2,611,687 - MPMX20_02470 0.68 -1.2 2,611,715 + MPMX20_02470 0.76 -3.6 2,611,727 + MPMX20_02470 0.79 +0.7 2,611,727 + MPMX20_02470 0.79 -1.6 2,611,727 + MPMX20_02470 0.79 -0.2 2,611,727 + MPMX20_02470 0.79 -0.1 2,611,735 - MPMX20_02470 0.81 -0.0 2,611,735 - MPMX20_02470 0.81 -0.1 2,611,755 + MPMX20_02470 0.87 +0.9 2,611,787 + -0.5 2,611,891 + MPMX20_02471 0.40 +1.3 2,611,894 + MPMX20_02471 0.41 +2.5 2,611,899 - MPMX20_02471 0.43 +0.5 2,611,914 - MPMX20_02471 0.50 -0.1 2,611,940 - MPMX20_02471 0.61 -0.6 2,611,947 + MPMX20_02471 0.64 -0.5 2,612,024 + +0.9 2,612,026 + +0.5 2,612,034 - -1.2 2,612,038 + -1.4 2,612,040 + +1.2 2,612,046 - +1.1 2,612,154 - MPMX20_02472 0.11 +0.6 2,612,164 + MPMX20_02472 0.12 -1.1 2,612,206 - MPMX20_02472 0.19 -0.6 2,612,241 - MPMX20_02472 0.24 -0.6 2,612,269 + MPMX20_02472 0.28 -1.1 2,612,269 + MPMX20_02472 0.28 -1.5 2,612,484 + MPMX20_02472 0.60 +0.2 2,612,484 + MPMX20_02472 0.60 -2.3 2,612,492 - MPMX20_02472 0.61 -2.1 2,612,513 - MPMX20_02472 0.65 -0.1 2,612,549 - MPMX20_02472 0.70 -0.1 2,612,558 + MPMX20_02472 0.71 -1.8 2,612,561 - MPMX20_02472 0.72 -0.7 2,612,563 + MPMX20_02472 0.72 -0.4 2,612,571 - MPMX20_02472 0.73 -2.1 2,612,698 - -1.5 2,612,698 - -2.5 2,612,968 + +0.4 2,612,986 - -0.2 2,613,090 - MPMX20_02473 0.18 -2.5 2,613,099 + MPMX20_02473 0.19 +0.1 2,613,099 + MPMX20_02473 0.19 -0.0 2,613,109 - MPMX20_02473 0.20 -0.4 2,613,153 + MPMX20_02473 0.24 -0.3 2,613,342 + MPMX20_02473 0.44 +0.6 2,613,350 - MPMX20_02473 0.44 +0.0 2,613,350 - MPMX20_02473 0.44 +0.3 2,613,350 - MPMX20_02473 0.44 +0.2 2,613,377 + MPMX20_02473 0.47 -0.7 2,613,435 + MPMX20_02473 0.53 -1.4 2,613,443 - MPMX20_02473 0.54 -1.1 2,613,483 + MPMX20_02473 0.58 -1.3 2,613,511 - MPMX20_02473 0.61 -0.5 2,613,558 - MPMX20_02473 0.66 -0.7 2,613,619 + MPMX20_02473 0.72 -0.8 2,613,624 + MPMX20_02473 0.72 +0.8 2,613,626 - MPMX20_02473 0.73 -0.8 2,613,662 + MPMX20_02473 0.76 -0.1 2,613,662 + MPMX20_02473 0.76 -0.6 2,613,723 - MPMX20_02473 0.83 +0.2 2,613,724 - MPMX20_02473 0.83 -0.0 2,613,724 - MPMX20_02473 0.83 -0.3 2,613,727 + MPMX20_02473 0.83 -0.1
Or see this region's nucleotide sequence