Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01748 and MPMX20_01749 are separated by 59 nucleotides MPMX20_01749 and MPMX20_01750 are separated by 4 nucleotides MPMX20_01750 and MPMX20_01751 are separated by 93 nucleotides MPMX20_01751 and MPMX20_01752 are separated by 157 nucleotides MPMX20_01752 and MPMX20_01753 are separated by 3 nucleotides MPMX20_01753 and MPMX20_01754 are separated by 11 nucleotides
MPMX20_01748: MPMX20_01748 - putative lipid II flippase MurJ, at 1,841,160 to 1,842,695
_01748
MPMX20_01749: MPMX20_01749 - Flagella synthesis protein FlgN, at 1,842,755 to 1,843,180
_01749
MPMX20_01750: MPMX20_01750 - Negative regulator of flagellin synthesis, at 1,843,185 to 1,843,478
_01750
MPMX20_01751: MPMX20_01751 - Flagella basal body P-ring formation protein FlgA, at 1,843,572 to 1,844,231
_01751
MPMX20_01752: MPMX20_01752 - Flagellar basal body rod protein FlgB, at 1,844,389 to 1,844,805
_01752
MPMX20_01753: MPMX20_01753 - Flagellar basal-body rod protein FlgC, at 1,844,809 to 1,845,213
_01753
MPMX20_01754: MPMX20_01754 - Basal-body rod modification protein FlgD, at 1,845,225 to 1,845,935
_01754
Position (kb)
1843
1844
1845 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1842.651 kb on + strand at 1842.714 kb on + strand at 1842.732 kb on - strand at 1842.805 kb on + strand, within MPMX20_01749 at 1842.818 kb on - strand, within MPMX20_01749 at 1842.855 kb on - strand, within MPMX20_01749 at 1842.855 kb on - strand, within MPMX20_01749 at 1842.879 kb on - strand, within MPMX20_01749 at 1842.912 kb on + strand, within MPMX20_01749 at 1842.977 kb on + strand, within MPMX20_01749 at 1842.992 kb on - strand, within MPMX20_01749 at 1842.992 kb on - strand, within MPMX20_01749 at 1843.004 kb on - strand, within MPMX20_01749 at 1843.004 kb on - strand, within MPMX20_01749 at 1843.009 kb on + strand, within MPMX20_01749 at 1843.017 kb on - strand, within MPMX20_01749 at 1843.022 kb on - strand, within MPMX20_01749 at 1843.027 kb on - strand, within MPMX20_01749 at 1843.053 kb on + strand, within MPMX20_01749 at 1843.082 kb on - strand, within MPMX20_01749 at 1843.089 kb on + strand, within MPMX20_01749 at 1843.156 kb on - strand at 1843.186 kb on + strand at 1843.186 kb on + strand at 1843.196 kb on + strand at 1843.204 kb on - strand at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.428 kb on + strand, within MPMX20_01750 at 1843.430 kb on + strand, within MPMX20_01750 at 1843.430 kb on + strand, within MPMX20_01750 at 1843.430 kb on + strand, within MPMX20_01750 at 1843.430 kb on + strand, within MPMX20_01750 at 1843.433 kb on + strand, within MPMX20_01750 at 1843.436 kb on - strand, within MPMX20_01750 at 1843.438 kb on - strand, within MPMX20_01750 at 1843.438 kb on - strand, within MPMX20_01750 at 1843.438 kb on - strand, within MPMX20_01750 at 1843.480 kb on + strand at 1843.488 kb on - strand at 1843.488 kb on - strand at 1843.490 kb on + strand at 1843.519 kb on - strand at 1843.633 kb on - strand at 1843.633 kb on - strand at 1843.671 kb on + strand, within MPMX20_01751 at 1843.679 kb on - strand, within MPMX20_01751 at 1843.749 kb on - strand, within MPMX20_01751 at 1843.783 kb on - strand, within MPMX20_01751 at 1843.802 kb on + strand, within MPMX20_01751 at 1843.883 kb on + strand, within MPMX20_01751 at 1843.904 kb on + strand, within MPMX20_01751 at 1843.906 kb on + strand, within MPMX20_01751 at 1843.911 kb on + strand, within MPMX20_01751 at 1843.919 kb on - strand, within MPMX20_01751 at 1843.920 kb on + strand, within MPMX20_01751 at 1843.953 kb on + strand, within MPMX20_01751 at 1844.057 kb on + strand, within MPMX20_01751 at 1844.065 kb on - strand, within MPMX20_01751 at 1844.068 kb on - strand, within MPMX20_01751 at 1844.068 kb on - strand, within MPMX20_01751 at 1844.159 kb on + strand, within MPMX20_01751 at 1844.174 kb on + strand at 1844.175 kb on + strand at 1844.216 kb on + strand at 1844.216 kb on + strand at 1844.224 kb on - strand at 1844.224 kb on - strand at 1844.237 kb on + strand at 1844.245 kb on - strand at 1844.346 kb on + strand at 1844.346 kb on + strand at 1844.346 kb on + strand at 1844.346 kb on + strand at 1844.347 kb on - strand at 1844.389 kb on - strand at 1844.408 kb on - strand at 1844.431 kb on + strand, within MPMX20_01752 at 1844.560 kb on + strand, within MPMX20_01752 at 1844.584 kb on + strand, within MPMX20_01752 at 1844.616 kb on + strand, within MPMX20_01752 at 1844.624 kb on - strand, within MPMX20_01752 at 1844.624 kb on - strand, within MPMX20_01752 at 1844.624 kb on - strand, within MPMX20_01752 at 1844.664 kb on + strand, within MPMX20_01752 at 1844.664 kb on + strand, within MPMX20_01752 at 1844.733 kb on + strand, within MPMX20_01752 at 1844.743 kb on + strand, within MPMX20_01752 at 1844.743 kb on + strand, within MPMX20_01752 at 1844.743 kb on + strand, within MPMX20_01752 at 1844.743 kb on + strand, within MPMX20_01752 at 1844.743 kb on + strand, within MPMX20_01752 at 1844.743 kb on + strand, within MPMX20_01752 at 1844.743 kb on + strand, within MPMX20_01752 at 1844.751 kb on - strand, within MPMX20_01752 at 1844.751 kb on - strand, within MPMX20_01752 at 1844.751 kb on - strand, within MPMX20_01752 at 1844.794 kb on - strand at 1844.848 kb on - strand at 1844.859 kb on + strand, within MPMX20_01753 at 1844.859 kb on + strand, within MPMX20_01753 at 1844.859 kb on + strand, within MPMX20_01753 at 1844.866 kb on + strand, within MPMX20_01753 at 1844.866 kb on + strand, within MPMX20_01753 at 1844.867 kb on - strand, within MPMX20_01753 at 1844.867 kb on - strand, within MPMX20_01753 at 1844.867 kb on - strand, within MPMX20_01753 at 1844.868 kb on + strand, within MPMX20_01753 at 1844.874 kb on - strand, within MPMX20_01753 at 1844.928 kb on + strand, within MPMX20_01753 at 1844.936 kb on - strand, within MPMX20_01753 at 1844.936 kb on - strand, within MPMX20_01753 at 1844.936 kb on - strand, within MPMX20_01753 at 1844.936 kb on - strand, within MPMX20_01753 at 1845.130 kb on + strand, within MPMX20_01753 at 1845.160 kb on + strand, within MPMX20_01753 at 1845.160 kb on + strand, within MPMX20_01753 at 1845.160 kb on + strand, within MPMX20_01753 at 1845.162 kb on + strand, within MPMX20_01753 at 1845.162 kb on + strand, within MPMX20_01753 at 1845.162 kb on + strand, within MPMX20_01753 at 1845.162 kb on + strand, within MPMX20_01753 at 1845.162 kb on + strand, within MPMX20_01753 at 1845.170 kb on - strand, within MPMX20_01753 at 1845.170 kb on - strand, within MPMX20_01753 at 1845.186 kb on + strand at 1845.208 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,842,651 + -3.9 1,842,714 + -0.0 1,842,732 - -0.2 1,842,805 + MPMX20_01749 0.12 +0.4 1,842,818 - MPMX20_01749 0.15 -0.6 1,842,855 - MPMX20_01749 0.23 +0.5 1,842,855 - MPMX20_01749 0.23 -1.8 1,842,879 - MPMX20_01749 0.29 -0.9 1,842,912 + MPMX20_01749 0.37 +0.7 1,842,977 + MPMX20_01749 0.52 -0.2 1,842,992 - MPMX20_01749 0.56 +0.7 1,842,992 - MPMX20_01749 0.56 +0.8 1,843,004 - MPMX20_01749 0.58 -2.0 1,843,004 - MPMX20_01749 0.58 -1.3 1,843,009 + MPMX20_01749 0.60 +0.5 1,843,017 - MPMX20_01749 0.62 +0.6 1,843,022 - MPMX20_01749 0.63 +0.4 1,843,027 - MPMX20_01749 0.64 +0.4 1,843,053 + MPMX20_01749 0.70 -1.5 1,843,082 - MPMX20_01749 0.77 -2.1 1,843,089 + MPMX20_01749 0.78 -1.2 1,843,156 - +0.3 1,843,186 + -1.8 1,843,186 + -0.4 1,843,196 + +0.7 1,843,204 - +1.4 1,843,352 + MPMX20_01750 0.57 -1.0 1,843,352 + MPMX20_01750 0.57 -1.0 1,843,352 + MPMX20_01750 0.57 -1.4 1,843,352 + MPMX20_01750 0.57 +0.4 1,843,352 + MPMX20_01750 0.57 -0.0 1,843,352 + MPMX20_01750 0.57 -0.5 1,843,352 + MPMX20_01750 0.57 -1.4 1,843,352 + MPMX20_01750 0.57 -0.6 1,843,352 + MPMX20_01750 0.57 +0.3 1,843,352 + MPMX20_01750 0.57 +0.0 1,843,360 - MPMX20_01750 0.60 -0.6 1,843,360 - MPMX20_01750 0.60 +0.4 1,843,360 - MPMX20_01750 0.60 +0.4 1,843,360 - MPMX20_01750 0.60 +1.0 1,843,360 - MPMX20_01750 0.60 -0.6 1,843,360 - MPMX20_01750 0.60 +1.4 1,843,360 - MPMX20_01750 0.60 -1.4 1,843,360 - MPMX20_01750 0.60 -1.8 1,843,360 - MPMX20_01750 0.60 -0.0 1,843,360 - MPMX20_01750 0.60 +0.4 1,843,428 + MPMX20_01750 0.83 -2.5 1,843,430 + MPMX20_01750 0.83 -0.2 1,843,430 + MPMX20_01750 0.83 +0.4 1,843,430 + MPMX20_01750 0.83 -1.8 1,843,430 + MPMX20_01750 0.83 -1.3 1,843,433 + MPMX20_01750 0.84 +0.5 1,843,436 - MPMX20_01750 0.85 -2.0 1,843,438 - MPMX20_01750 0.86 +0.3 1,843,438 - MPMX20_01750 0.86 +0.6 1,843,438 - MPMX20_01750 0.86 +1.8 1,843,480 + +0.7 1,843,488 - -0.9 1,843,488 - +0.1 1,843,490 + -1.1 1,843,519 - +0.2 1,843,633 - +1.4 1,843,633 - -0.7 1,843,671 + MPMX20_01751 0.15 -0.1 1,843,679 - MPMX20_01751 0.16 +0.1 1,843,749 - MPMX20_01751 0.27 +2.0 1,843,783 - MPMX20_01751 0.32 +0.5 1,843,802 + MPMX20_01751 0.35 -0.7 1,843,883 + MPMX20_01751 0.47 -2.0 1,843,904 + MPMX20_01751 0.50 -0.2 1,843,906 + MPMX20_01751 0.51 +1.6 1,843,911 + MPMX20_01751 0.51 +1.0 1,843,919 - MPMX20_01751 0.53 +0.0 1,843,920 + MPMX20_01751 0.53 -0.0 1,843,953 + MPMX20_01751 0.58 +1.4 1,844,057 + MPMX20_01751 0.73 +0.7 1,844,065 - MPMX20_01751 0.75 -0.0 1,844,068 - MPMX20_01751 0.75 +2.4 1,844,068 - MPMX20_01751 0.75 +1.2 1,844,159 + MPMX20_01751 0.89 -0.2 1,844,174 + -0.8 1,844,175 + -0.0 1,844,216 + -0.6 1,844,216 + -1.2 1,844,224 - +0.6 1,844,224 - +1.5 1,844,237 + -0.2 1,844,245 - -0.4 1,844,346 + +0.4 1,844,346 + -0.6 1,844,346 + +0.2 1,844,346 + -0.4 1,844,347 - -1.8 1,844,389 - +1.5 1,844,408 - +0.1 1,844,431 + MPMX20_01752 0.10 -2.0 1,844,560 + MPMX20_01752 0.41 +0.7 1,844,584 + MPMX20_01752 0.47 +0.2 1,844,616 + MPMX20_01752 0.54 +0.6 1,844,624 - MPMX20_01752 0.56 +0.9 1,844,624 - MPMX20_01752 0.56 -0.2 1,844,624 - MPMX20_01752 0.56 +0.1 1,844,664 + MPMX20_01752 0.66 +0.0 1,844,664 + MPMX20_01752 0.66 +0.7 1,844,733 + MPMX20_01752 0.82 +0.2 1,844,743 + MPMX20_01752 0.85 +0.1 1,844,743 + MPMX20_01752 0.85 +0.0 1,844,743 + MPMX20_01752 0.85 -2.9 1,844,743 + MPMX20_01752 0.85 -0.1 1,844,743 + MPMX20_01752 0.85 +0.4 1,844,743 + MPMX20_01752 0.85 -0.4 1,844,743 + MPMX20_01752 0.85 -0.2 1,844,751 - MPMX20_01752 0.87 -0.8 1,844,751 - MPMX20_01752 0.87 +0.8 1,844,751 - MPMX20_01752 0.87 +0.4 1,844,794 - -0.2 1,844,848 - +1.0 1,844,859 + MPMX20_01753 0.12 -0.2 1,844,859 + MPMX20_01753 0.12 -0.1 1,844,859 + MPMX20_01753 0.12 +0.4 1,844,866 + MPMX20_01753 0.14 -0.0 1,844,866 + MPMX20_01753 0.14 +0.4 1,844,867 - MPMX20_01753 0.14 -0.4 1,844,867 - MPMX20_01753 0.14 -0.4 1,844,867 - MPMX20_01753 0.14 +1.4 1,844,868 + MPMX20_01753 0.15 -0.4 1,844,874 - MPMX20_01753 0.16 +0.9 1,844,928 + MPMX20_01753 0.29 +0.5 1,844,936 - MPMX20_01753 0.31 +0.6 1,844,936 - MPMX20_01753 0.31 +1.3 1,844,936 - MPMX20_01753 0.31 +1.6 1,844,936 - MPMX20_01753 0.31 +0.3 1,845,130 + MPMX20_01753 0.79 -0.1 1,845,160 + MPMX20_01753 0.87 -0.2 1,845,160 + MPMX20_01753 0.87 +0.2 1,845,160 + MPMX20_01753 0.87 -0.5 1,845,162 + MPMX20_01753 0.87 +0.8 1,845,162 + MPMX20_01753 0.87 +0.4 1,845,162 + MPMX20_01753 0.87 +0.0 1,845,162 + MPMX20_01753 0.87 +0.8 1,845,162 + MPMX20_01753 0.87 +0.1 1,845,170 - MPMX20_01753 0.89 -0.6 1,845,170 - MPMX20_01753 0.89 +0.2 1,845,186 + -0.3 1,845,208 - +1.0
Or see this region's nucleotide sequence