Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04473 and MPMX20_04474 are separated by 170 nucleotides MPMX20_04474 and MPMX20_04475 are separated by 507 nucleotides MPMX20_04475 and MPMX20_04476 are separated by 44 nucleotides MPMX20_04476 and MPMX20_04477 are separated by 21 nucleotides MPMX20_04477 and MPMX20_04478 are separated by 67 nucleotides
MPMX20_04473: MPMX20_04473 - Protein HemY, at 4,678,500 to 4,679,699
_04473
MPMX20_04474: MPMX20_04474 - hypothetical protein, at 4,679,870 to 4,681,081
_04474
MPMX20_04475: MPMX20_04475 - tRNA-Pro, at 4,681,589 to 4,681,665
_04475
MPMX20_04476: MPMX20_04476 - tRNA-Leu, at 4,681,710 to 4,681,796
_04476
MPMX20_04477: MPMX20_04477 - tRNA-His, at 4,681,818 to 4,681,893
_04477
MPMX20_04478: MPMX20_04478 - tRNA-Arg, at 4,681,961 to 4,682,037
_04478
Position (kb)
4679
4680
4681
4682 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4678.896 kb on + strand, within MPMX20_04473 at 4678.896 kb on + strand, within MPMX20_04473 at 4678.904 kb on - strand, within MPMX20_04473 at 4678.967 kb on + strand, within MPMX20_04473 at 4679.044 kb on - strand, within MPMX20_04473 at 4679.064 kb on - strand, within MPMX20_04473 at 4679.064 kb on - strand, within MPMX20_04473 at 4679.143 kb on + strand, within MPMX20_04473 at 4679.146 kb on - strand, within MPMX20_04473 at 4679.194 kb on + strand, within MPMX20_04473 at 4679.241 kb on + strand, within MPMX20_04473 at 4679.321 kb on - strand, within MPMX20_04473 at 4679.326 kb on - strand, within MPMX20_04473 at 4679.343 kb on + strand, within MPMX20_04473 at 4679.348 kb on + strand, within MPMX20_04473 at 4679.363 kb on - strand, within MPMX20_04473 at 4679.378 kb on + strand, within MPMX20_04473 at 4679.393 kb on + strand, within MPMX20_04473 at 4679.420 kb on + strand, within MPMX20_04473 at 4679.420 kb on - strand, within MPMX20_04473 at 4679.433 kb on - strand, within MPMX20_04473 at 4679.459 kb on + strand, within MPMX20_04473 at 4679.459 kb on + strand, within MPMX20_04473 at 4679.467 kb on - strand, within MPMX20_04473 at 4679.467 kb on - strand, within MPMX20_04473 at 4679.479 kb on + strand, within MPMX20_04473 at 4679.484 kb on + strand, within MPMX20_04473 at 4679.492 kb on - strand, within MPMX20_04473 at 4679.494 kb on - strand, within MPMX20_04473 at 4679.621 kb on + strand at 4679.621 kb on + strand at 4679.626 kb on + strand at 4679.626 kb on + strand at 4679.628 kb on + strand at 4679.663 kb on + strand at 4679.663 kb on + strand at 4679.718 kb on - strand at 4679.718 kb on - strand at 4679.754 kb on - strand at 4679.939 kb on + strand at 4679.940 kb on - strand at 4680.002 kb on + strand, within MPMX20_04474 at 4680.006 kb on + strand, within MPMX20_04474 at 4680.032 kb on - strand, within MPMX20_04474 at 4680.093 kb on + strand, within MPMX20_04474 at 4680.148 kb on + strand, within MPMX20_04474 at 4680.157 kb on - strand, within MPMX20_04474 at 4680.184 kb on + strand, within MPMX20_04474 at 4680.234 kb on - strand, within MPMX20_04474 at 4680.234 kb on - strand, within MPMX20_04474 at 4680.248 kb on + strand, within MPMX20_04474 at 4680.251 kb on - strand, within MPMX20_04474 at 4680.257 kb on - strand, within MPMX20_04474 at 4680.282 kb on + strand, within MPMX20_04474 at 4680.282 kb on + strand, within MPMX20_04474 at 4680.471 kb on + strand, within MPMX20_04474 at 4680.506 kb on + strand, within MPMX20_04474 at 4680.529 kb on - strand, within MPMX20_04474 at 4680.690 kb on - strand, within MPMX20_04474 at 4680.698 kb on - strand, within MPMX20_04474 at 4680.831 kb on - strand, within MPMX20_04474 at 4680.845 kb on - strand, within MPMX20_04474 at 4680.850 kb on - strand, within MPMX20_04474 at 4680.914 kb on + strand, within MPMX20_04474 at 4680.942 kb on + strand, within MPMX20_04474 at 4680.995 kb on + strand at 4681.005 kb on + strand at 4681.038 kb on + strand at 4681.050 kb on - strand at 4681.057 kb on + strand at 4681.060 kb on + strand at 4681.065 kb on + strand at 4681.065 kb on - strand at 4681.165 kb on - strand at 4681.280 kb on - strand at 4681.283 kb on - strand at 4681.393 kb on - strand at 4681.502 kb on + strand at 4681.588 kb on - strand at 4681.676 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,678,896 + MPMX20_04473 0.33 -0.7 4,678,896 + MPMX20_04473 0.33 +0.2 4,678,904 - MPMX20_04473 0.34 -1.2 4,678,967 + MPMX20_04473 0.39 +1.6 4,679,044 - MPMX20_04473 0.45 -2.7 4,679,064 - MPMX20_04473 0.47 -0.4 4,679,064 - MPMX20_04473 0.47 +1.7 4,679,143 + MPMX20_04473 0.54 -1.6 4,679,146 - MPMX20_04473 0.54 +0.7 4,679,194 + MPMX20_04473 0.58 -0.1 4,679,241 + MPMX20_04473 0.62 -0.1 4,679,321 - MPMX20_04473 0.68 -0.3 4,679,326 - MPMX20_04473 0.69 -0.0 4,679,343 + MPMX20_04473 0.70 -1.7 4,679,348 + MPMX20_04473 0.71 +0.7 4,679,363 - MPMX20_04473 0.72 -0.7 4,679,378 + MPMX20_04473 0.73 -1.7 4,679,393 + MPMX20_04473 0.74 +0.3 4,679,420 + MPMX20_04473 0.77 -0.9 4,679,420 - MPMX20_04473 0.77 -2.2 4,679,433 - MPMX20_04473 0.78 +1.7 4,679,459 + MPMX20_04473 0.80 +0.7 4,679,459 + MPMX20_04473 0.80 +0.9 4,679,467 - MPMX20_04473 0.81 +0.5 4,679,467 - MPMX20_04473 0.81 -1.5 4,679,479 + MPMX20_04473 0.82 +0.6 4,679,484 + MPMX20_04473 0.82 -2.4 4,679,492 - MPMX20_04473 0.83 -1.4 4,679,494 - MPMX20_04473 0.83 -0.1 4,679,621 + -0.3 4,679,621 + +0.6 4,679,626 + +0.3 4,679,626 + -1.4 4,679,628 + +0.7 4,679,663 + +0.9 4,679,663 + -0.5 4,679,718 - -0.8 4,679,718 - +1.1 4,679,754 - -0.4 4,679,939 + -0.2 4,679,940 - +1.6 4,680,002 + MPMX20_04474 0.11 +1.0 4,680,006 + MPMX20_04474 0.11 +0.1 4,680,032 - MPMX20_04474 0.13 -1.9 4,680,093 + MPMX20_04474 0.18 -1.2 4,680,148 + MPMX20_04474 0.23 -0.5 4,680,157 - MPMX20_04474 0.24 +0.2 4,680,184 + MPMX20_04474 0.26 +0.1 4,680,234 - MPMX20_04474 0.30 +3.1 4,680,234 - MPMX20_04474 0.30 -0.9 4,680,248 + MPMX20_04474 0.31 +0.5 4,680,251 - MPMX20_04474 0.31 +0.4 4,680,257 - MPMX20_04474 0.32 +0.4 4,680,282 + MPMX20_04474 0.34 +0.2 4,680,282 + MPMX20_04474 0.34 +0.9 4,680,471 + MPMX20_04474 0.50 +0.4 4,680,506 + MPMX20_04474 0.52 +2.4 4,680,529 - MPMX20_04474 0.54 -0.9 4,680,690 - MPMX20_04474 0.68 +0.2 4,680,698 - MPMX20_04474 0.68 +0.8 4,680,831 - MPMX20_04474 0.79 +0.8 4,680,845 - MPMX20_04474 0.80 -1.4 4,680,850 - MPMX20_04474 0.81 +0.3 4,680,914 + MPMX20_04474 0.86 -0.0 4,680,942 + MPMX20_04474 0.88 -0.1 4,680,995 + +0.2 4,681,005 + +0.7 4,681,038 + +1.2 4,681,050 - +1.2 4,681,057 + -1.3 4,681,060 + -1.6 4,681,065 + +1.8 4,681,065 - -0.2 4,681,165 - -0.3 4,681,280 - -0.9 4,681,283 - +0.8 4,681,393 - -0.2 4,681,502 + -0.2 4,681,588 - +0.5 4,681,676 - +1.4
Or see this region's nucleotide sequence