Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02587 and MPMX20_02588 are separated by 772 nucleotides MPMX20_02588 and MPMX20_02589 are separated by 479 nucleotides
MPMX20_02587: MPMX20_02587 - Periplasmic oligopeptide-binding protein, at 2,722,120 to 2,723,751
_02587
MPMX20_02588: MPMX20_02588 - hypothetical protein, at 2,724,524 to 2,725,171
_02588
MPMX20_02589: MPMX20_02589 - Aldehyde-alcohol dehydrogenase, at 2,725,651 to 2,728,329
_02589
Position (kb)
2724
2725
2726 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2723.537 kb on + strand, within MPMX20_02587 at 2723.537 kb on + strand, within MPMX20_02587 at 2723.537 kb on + strand, within MPMX20_02587 at 2723.538 kb on - strand, within MPMX20_02587 at 2723.545 kb on - strand, within MPMX20_02587 at 2723.545 kb on - strand, within MPMX20_02587 at 2723.545 kb on - strand, within MPMX20_02587 at 2723.554 kb on + strand, within MPMX20_02587 at 2723.576 kb on + strand, within MPMX20_02587 at 2723.592 kb on + strand at 2723.592 kb on + strand at 2723.592 kb on + strand at 2723.592 kb on + strand at 2723.592 kb on + strand at 2723.600 kb on - strand at 2723.600 kb on - strand at 2723.600 kb on - strand at 2723.600 kb on - strand at 2723.602 kb on + strand at 2723.615 kb on + strand at 2723.623 kb on - strand at 2723.796 kb on + strand at 2723.796 kb on + strand at 2723.796 kb on + strand at 2723.796 kb on + strand at 2723.796 kb on + strand at 2723.796 kb on + strand at 2723.796 kb on + strand at 2723.796 kb on + strand at 2723.804 kb on - strand at 2723.804 kb on - strand at 2723.804 kb on - strand at 2723.804 kb on - strand at 2723.804 kb on - strand at 2723.804 kb on - strand at 2723.808 kb on + strand at 2723.808 kb on + strand at 2723.808 kb on + strand at 2723.808 kb on + strand at 2723.808 kb on + strand at 2723.808 kb on + strand at 2723.808 kb on + strand at 2723.808 kb on + strand at 2723.808 kb on + strand at 2723.808 kb on + strand at 2723.808 kb on + strand at 2723.808 kb on + strand at 2723.813 kb on + strand at 2723.813 kb on + strand at 2723.813 kb on + strand at 2723.813 kb on + strand at 2723.813 kb on + strand at 2723.813 kb on + strand at 2723.813 kb on + strand at 2723.813 kb on + strand at 2723.813 kb on + strand at 2723.815 kb on + strand at 2723.816 kb on - strand at 2723.816 kb on - strand at 2723.816 kb on - strand at 2723.816 kb on - strand at 2723.816 kb on - strand at 2723.816 kb on - strand at 2723.821 kb on - strand at 2723.821 kb on - strand at 2723.821 kb on - strand at 2723.821 kb on - strand at 2723.821 kb on - strand at 2723.821 kb on - strand at 2723.821 kb on - strand at 2723.826 kb on - strand at 2723.924 kb on + strand at 2723.924 kb on + strand at 2723.924 kb on + strand at 2723.931 kb on + strand at 2723.931 kb on + strand at 2723.931 kb on + strand at 2723.931 kb on + strand at 2723.931 kb on + strand at 2723.931 kb on + strand at 2723.931 kb on + strand at 2723.931 kb on + strand at 2723.932 kb on - strand at 2723.939 kb on - strand at 2723.939 kb on - strand at 2723.939 kb on - strand at 2723.939 kb on - strand at 2723.939 kb on - strand at 2723.940 kb on + strand at 2723.941 kb on + strand at 2723.942 kb on + strand at 2723.947 kb on + strand at 2723.949 kb on - strand at 2723.950 kb on - strand at 2723.955 kb on - strand at 2723.955 kb on - strand at 2723.967 kb on + strand at 2723.975 kb on - strand at 2724.032 kb on + strand at 2724.040 kb on - strand at 2724.050 kb on - strand at 2724.050 kb on - strand at 2724.050 kb on - strand at 2724.050 kb on - strand at 2724.098 kb on + strand at 2724.106 kb on - strand at 2724.128 kb on - strand at 2724.289 kb on + strand at 2724.312 kb on + strand at 2724.312 kb on + strand at 2724.317 kb on + strand at 2724.317 kb on + strand at 2724.318 kb on + strand at 2724.320 kb on - strand at 2724.326 kb on - strand at 2724.370 kb on - strand at 2724.578 kb on + strand at 2724.588 kb on + strand at 2724.588 kb on + strand at 2724.588 kb on + strand at 2724.596 kb on - strand, within MPMX20_02588 at 2724.606 kb on - strand, within MPMX20_02588 at 2724.634 kb on + strand, within MPMX20_02588 at 2724.637 kb on - strand, within MPMX20_02588 at 2724.642 kb on - strand, within MPMX20_02588 at 2724.686 kb on - strand, within MPMX20_02588 at 2724.686 kb on - strand, within MPMX20_02588 at 2724.715 kb on + strand, within MPMX20_02588 at 2724.733 kb on + strand, within MPMX20_02588 at 2724.745 kb on - strand, within MPMX20_02588 at 2724.745 kb on - strand, within MPMX20_02588 at 2724.770 kb on + strand, within MPMX20_02588 at 2724.775 kb on + strand, within MPMX20_02588 at 2724.775 kb on + strand, within MPMX20_02588 at 2724.775 kb on + strand, within MPMX20_02588 at 2724.783 kb on - strand, within MPMX20_02588 at 2724.783 kb on - strand, within MPMX20_02588 at 2724.783 kb on - strand, within MPMX20_02588 at 2724.816 kb on - strand, within MPMX20_02588 at 2724.822 kb on - strand, within MPMX20_02588 at 2724.875 kb on - strand, within MPMX20_02588 at 2724.877 kb on + strand, within MPMX20_02588 at 2724.877 kb on + strand, within MPMX20_02588 at 2724.885 kb on - strand, within MPMX20_02588 at 2724.898 kb on + strand, within MPMX20_02588 at 2724.906 kb on - strand, within MPMX20_02588 at 2724.906 kb on - strand, within MPMX20_02588 at 2724.969 kb on - strand, within MPMX20_02588 at 2725.020 kb on - strand, within MPMX20_02588 at 2725.026 kb on - strand, within MPMX20_02588 at 2725.026 kb on - strand, within MPMX20_02588 at 2725.026 kb on - strand, within MPMX20_02588 at 2725.026 kb on - strand, within MPMX20_02588 at 2725.048 kb on - strand, within MPMX20_02588 at 2725.067 kb on + strand, within MPMX20_02588 at 2725.076 kb on + strand, within MPMX20_02588 at 2725.076 kb on + strand, within MPMX20_02588 at 2725.101 kb on + strand, within MPMX20_02588 at 2725.101 kb on + strand, within MPMX20_02588 at 2725.109 kb on - strand at 2725.109 kb on - strand at 2725.109 kb on - strand at 2725.202 kb on - strand at 2725.239 kb on + strand at 2725.285 kb on - strand at 2725.303 kb on + strand at 2725.311 kb on - strand at 2725.334 kb on - strand at 2725.398 kb on - strand at 2725.433 kb on + strand at 2725.442 kb on + strand at 2725.478 kb on - strand at 2725.478 kb on - strand at 2725.492 kb on + strand at 2725.492 kb on + strand at 2725.500 kb on - strand at 2725.500 kb on - strand at 2725.500 kb on - strand at 2725.500 kb on - strand at 2725.501 kb on - strand at 2725.591 kb on - strand at 2725.591 kb on - strand at 2725.592 kb on - strand at 2725.625 kb on + strand at 2725.636 kb on + strand at 2725.672 kb on + strand at 2725.675 kb on - strand at 2725.684 kb on + strand at 2725.686 kb on + strand at 2725.690 kb on - strand at 2725.692 kb on - strand at 2725.783 kb on + strand at 2725.886 kb on - strand at 2725.886 kb on - strand at 2725.902 kb on + strand at 2725.902 kb on - strand at 2725.910 kb on - strand at 2725.920 kb on - strand, within MPMX20_02589 at 2725.931 kb on - strand, within MPMX20_02589 at 2725.949 kb on + strand, within MPMX20_02589 at 2725.997 kb on - strand, within MPMX20_02589 at 2726.050 kb on + strand, within MPMX20_02589 at 2726.060 kb on + strand, within MPMX20_02589 at 2726.063 kb on - strand, within MPMX20_02589 at 2726.161 kb on + strand, within MPMX20_02589 at 2726.171 kb on + strand, within MPMX20_02589
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 2,723,537 + MPMX20_02587 0.87 -1.5 2,723,537 + MPMX20_02587 0.87 -2.7 2,723,537 + MPMX20_02587 0.87 +0.4 2,723,538 - MPMX20_02587 0.87 -1.1 2,723,545 - MPMX20_02587 0.87 -0.5 2,723,545 - MPMX20_02587 0.87 -0.2 2,723,545 - MPMX20_02587 0.87 +0.0 2,723,554 + MPMX20_02587 0.88 +0.5 2,723,576 + MPMX20_02587 0.89 -0.7 2,723,592 + -1.1 2,723,592 + -2.3 2,723,592 + +0.5 2,723,592 + +0.1 2,723,592 + -0.3 2,723,600 - +0.1 2,723,600 - -0.9 2,723,600 - +0.0 2,723,600 - -0.2 2,723,602 + -0.6 2,723,615 + +0.3 2,723,623 - -0.1 2,723,796 + -0.9 2,723,796 + +0.1 2,723,796 + -0.2 2,723,796 + +1.0 2,723,796 + -3.4 2,723,796 + -0.4 2,723,796 + -0.2 2,723,796 + +4.7 2,723,804 - -0.6 2,723,804 - -0.8 2,723,804 - +0.1 2,723,804 - -0.3 2,723,804 - -0.6 2,723,804 - +0.5 2,723,808 + +0.7 2,723,808 + -0.6 2,723,808 + -0.9 2,723,808 + -1.3 2,723,808 + +0.5 2,723,808 + +0.9 2,723,808 + +0.2 2,723,808 + +2.9 2,723,808 + -0.0 2,723,808 + +0.4 2,723,808 + -1.5 2,723,808 + -0.5 2,723,813 + +0.4 2,723,813 + -1.3 2,723,813 + +0.1 2,723,813 + -0.9 2,723,813 + -0.2 2,723,813 + -0.8 2,723,813 + -1.7 2,723,813 + -0.6 2,723,813 + -0.7 2,723,815 + -2.2 2,723,816 - +0.4 2,723,816 - +0.1 2,723,816 - -0.2 2,723,816 - +1.3 2,723,816 - -0.2 2,723,816 - +0.7 2,723,821 - +1.2 2,723,821 - -0.8 2,723,821 - +0.0 2,723,821 - -0.9 2,723,821 - -0.2 2,723,821 - +0.3 2,723,821 - +0.5 2,723,826 - +0.1 2,723,924 + -0.7 2,723,924 + -1.1 2,723,924 + -0.1 2,723,931 + -0.0 2,723,931 + -0.7 2,723,931 + -1.9 2,723,931 + -1.5 2,723,931 + +0.2 2,723,931 + -0.4 2,723,931 + -0.1 2,723,931 + -0.5 2,723,932 - -1.2 2,723,939 - +0.8 2,723,939 - +0.5 2,723,939 - +0.5 2,723,939 - +1.5 2,723,939 - +1.0 2,723,940 + +0.1 2,723,941 + +1.5 2,723,942 + +0.2 2,723,947 + -3.2 2,723,949 - +0.4 2,723,950 - +0.8 2,723,955 - -0.2 2,723,955 - -0.2 2,723,967 + -0.5 2,723,975 - -0.7 2,724,032 + -1.1 2,724,040 - +0.8 2,724,050 - +0.3 2,724,050 - +0.1 2,724,050 - -1.7 2,724,050 - -0.6 2,724,098 + +0.1 2,724,106 - -0.2 2,724,128 - +1.0 2,724,289 + -0.4 2,724,312 + -0.3 2,724,312 + +0.2 2,724,317 + +0.1 2,724,317 + +1.0 2,724,318 + -0.5 2,724,320 - +1.2 2,724,326 - +0.5 2,724,370 - -1.2 2,724,578 + -0.4 2,724,588 + -0.7 2,724,588 + -1.5 2,724,588 + -0.3 2,724,596 - MPMX20_02588 0.11 -1.2 2,724,606 - MPMX20_02588 0.13 -0.3 2,724,634 + MPMX20_02588 0.17 -1.0 2,724,637 - MPMX20_02588 0.17 -1.4 2,724,642 - MPMX20_02588 0.18 -0.7 2,724,686 - MPMX20_02588 0.25 +0.0 2,724,686 - MPMX20_02588 0.25 -0.5 2,724,715 + MPMX20_02588 0.29 +0.5 2,724,733 + MPMX20_02588 0.32 -1.0 2,724,745 - MPMX20_02588 0.34 -1.7 2,724,745 - MPMX20_02588 0.34 -0.3 2,724,770 + MPMX20_02588 0.38 -0.3 2,724,775 + MPMX20_02588 0.39 -1.1 2,724,775 + MPMX20_02588 0.39 -0.1 2,724,775 + MPMX20_02588 0.39 -0.2 2,724,783 - MPMX20_02588 0.40 -1.3 2,724,783 - MPMX20_02588 0.40 -1.3 2,724,783 - MPMX20_02588 0.40 -0.2 2,724,816 - MPMX20_02588 0.45 -1.2 2,724,822 - MPMX20_02588 0.46 -0.0 2,724,875 - MPMX20_02588 0.54 +0.6 2,724,877 + MPMX20_02588 0.54 -0.7 2,724,877 + MPMX20_02588 0.54 -0.3 2,724,885 - MPMX20_02588 0.56 -2.4 2,724,898 + MPMX20_02588 0.58 -0.3 2,724,906 - MPMX20_02588 0.59 +0.1 2,724,906 - MPMX20_02588 0.59 -1.8 2,724,969 - MPMX20_02588 0.69 -0.6 2,725,020 - MPMX20_02588 0.77 +0.7 2,725,026 - MPMX20_02588 0.77 +0.7 2,725,026 - MPMX20_02588 0.77 -0.8 2,725,026 - MPMX20_02588 0.77 -0.5 2,725,026 - MPMX20_02588 0.77 +0.3 2,725,048 - MPMX20_02588 0.81 -0.2 2,725,067 + MPMX20_02588 0.84 -2.4 2,725,076 + MPMX20_02588 0.85 -1.2 2,725,076 + MPMX20_02588 0.85 +0.8 2,725,101 + MPMX20_02588 0.89 -1.1 2,725,101 + MPMX20_02588 0.89 -0.2 2,725,109 - +0.9 2,725,109 - -0.8 2,725,109 - -1.7 2,725,202 - +1.6 2,725,239 + -0.5 2,725,285 - +0.1 2,725,303 + +0.3 2,725,311 - +1.5 2,725,334 - +0.1 2,725,398 - +0.3 2,725,433 + -0.1 2,725,442 + -0.0 2,725,478 - -0.0 2,725,478 - +0.6 2,725,492 + +0.3 2,725,492 + -0.0 2,725,500 - +0.1 2,725,500 - +0.1 2,725,500 - -0.3 2,725,500 - +0.1 2,725,501 - -0.7 2,725,591 - -0.9 2,725,591 - -0.6 2,725,592 - -0.5 2,725,625 + +0.2 2,725,636 + +0.1 2,725,672 + +0.6 2,725,675 - +1.2 2,725,684 + +0.3 2,725,686 + -0.7 2,725,690 - -1.7 2,725,692 - +0.3 2,725,783 + +0.6 2,725,886 - +0.5 2,725,886 - +0.2 2,725,902 + -0.2 2,725,902 - -2.8 2,725,910 - -1.1 2,725,920 - MPMX20_02589 0.10 +0.9 2,725,931 - MPMX20_02589 0.10 -0.8 2,725,949 + MPMX20_02589 0.11 -0.9 2,725,997 - MPMX20_02589 0.13 +0.1 2,726,050 + MPMX20_02589 0.15 +0.4 2,726,060 + MPMX20_02589 0.15 +0.9 2,726,063 - MPMX20_02589 0.15 +2.5 2,726,161 + MPMX20_02589 0.19 +1.2 2,726,171 + MPMX20_02589 0.19 -0.8
Or see this region's nucleotide sequence