Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01839 and MPMX20_01840 are separated by 27 nucleotides MPMX20_01840 and MPMX20_01841 are separated by 432 nucleotides
MPMX20_01839: MPMX20_01839 - hypothetical protein, at 1,931,404 to 1,932,759
_01839
MPMX20_01840: MPMX20_01840 - hypothetical protein, at 1,932,787 to 1,934,721
_01840
MPMX20_01841: MPMX20_01841 - MltA-interacting protein, at 1,935,154 to 1,935,903
_01841
Position (kb)
1932
1933
1934
1935 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1931.822 kb on + strand, within MPMX20_01839 at 1931.833 kb on + strand, within MPMX20_01839 at 1931.855 kb on + strand, within MPMX20_01839 at 1931.856 kb on + strand, within MPMX20_01839 at 1931.882 kb on + strand, within MPMX20_01839 at 1931.882 kb on + strand, within MPMX20_01839 at 1931.890 kb on - strand, within MPMX20_01839 at 1931.890 kb on - strand, within MPMX20_01839 at 1931.896 kb on + strand, within MPMX20_01839 at 1931.932 kb on + strand, within MPMX20_01839 at 1931.940 kb on - strand, within MPMX20_01839 at 1931.947 kb on + strand, within MPMX20_01839 at 1931.988 kb on + strand, within MPMX20_01839 at 1931.988 kb on + strand, within MPMX20_01839 at 1931.988 kb on + strand, within MPMX20_01839 at 1931.988 kb on + strand, within MPMX20_01839 at 1931.988 kb on + strand, within MPMX20_01839 at 1931.996 kb on - strand, within MPMX20_01839 at 1931.996 kb on - strand, within MPMX20_01839 at 1932.016 kb on + strand, within MPMX20_01839 at 1932.070 kb on - strand, within MPMX20_01839 at 1932.098 kb on + strand, within MPMX20_01839 at 1932.106 kb on - strand, within MPMX20_01839 at 1932.110 kb on + strand, within MPMX20_01839 at 1932.141 kb on - strand, within MPMX20_01839 at 1932.172 kb on + strand, within MPMX20_01839 at 1932.191 kb on + strand, within MPMX20_01839 at 1932.191 kb on + strand, within MPMX20_01839 at 1932.228 kb on - strand, within MPMX20_01839 at 1932.239 kb on + strand, within MPMX20_01839 at 1932.354 kb on + strand, within MPMX20_01839 at 1932.380 kb on + strand, within MPMX20_01839 at 1932.382 kb on - strand, within MPMX20_01839 at 1932.466 kb on - strand, within MPMX20_01839 at 1932.511 kb on + strand, within MPMX20_01839 at 1932.672 kb on + strand at 1932.693 kb on - strand at 1932.694 kb on + strand at 1932.721 kb on + strand at 1932.729 kb on - strand at 1932.729 kb on - strand at 1932.729 kb on - strand at 1933.118 kb on + strand, within MPMX20_01840 at 1933.249 kb on - strand, within MPMX20_01840 at 1933.256 kb on + strand, within MPMX20_01840 at 1933.312 kb on - strand, within MPMX20_01840 at 1933.333 kb on - strand, within MPMX20_01840 at 1933.416 kb on + strand, within MPMX20_01840 at 1933.421 kb on + strand, within MPMX20_01840 at 1933.458 kb on - strand, within MPMX20_01840 at 1933.477 kb on - strand, within MPMX20_01840 at 1933.479 kb on - strand, within MPMX20_01840 at 1933.507 kb on + strand, within MPMX20_01840 at 1933.509 kb on + strand, within MPMX20_01840 at 1933.632 kb on - strand, within MPMX20_01840 at 1933.635 kb on + strand, within MPMX20_01840 at 1933.661 kb on - strand, within MPMX20_01840 at 1933.710 kb on + strand, within MPMX20_01840 at 1933.710 kb on + strand, within MPMX20_01840 at 1933.710 kb on + strand, within MPMX20_01840 at 1933.718 kb on - strand, within MPMX20_01840 at 1933.718 kb on - strand, within MPMX20_01840 at 1933.718 kb on - strand, within MPMX20_01840 at 1933.865 kb on - strand, within MPMX20_01840 at 1933.897 kb on - strand, within MPMX20_01840 at 1933.897 kb on - strand, within MPMX20_01840 at 1933.974 kb on - strand, within MPMX20_01840 at 1934.010 kb on - strand, within MPMX20_01840 at 1934.054 kb on + strand, within MPMX20_01840 at 1934.183 kb on + strand, within MPMX20_01840 at 1934.207 kb on + strand, within MPMX20_01840 at 1934.284 kb on + strand, within MPMX20_01840 at 1934.391 kb on - strand, within MPMX20_01840 at 1934.423 kb on + strand, within MPMX20_01840 at 1934.461 kb on - strand, within MPMX20_01840 at 1934.475 kb on + strand, within MPMX20_01840 at 1934.483 kb on + strand, within MPMX20_01840 at 1934.483 kb on + strand, within MPMX20_01840 at 1934.483 kb on + strand, within MPMX20_01840 at 1934.483 kb on + strand, within MPMX20_01840 at 1934.614 kb on + strand at 1934.614 kb on + strand at 1934.614 kb on + strand at 1934.614 kb on + strand at 1934.622 kb on - strand at 1934.622 kb on - strand at 1934.661 kb on - strand at 1934.668 kb on + strand at 1934.668 kb on + strand at 1934.668 kb on - strand at 1934.751 kb on + strand at 1934.751 kb on + strand at 1934.751 kb on + strand at 1934.751 kb on + strand at 1934.751 kb on + strand at 1934.752 kb on + strand at 1934.759 kb on - strand at 1934.759 kb on - strand at 1934.759 kb on - strand at 1934.759 kb on - strand at 1934.759 kb on - strand at 1934.759 kb on - strand at 1934.760 kb on - strand at 1934.760 kb on - strand at 1934.760 kb on - strand at 1934.788 kb on + strand at 1934.805 kb on + strand at 1934.805 kb on + strand at 1934.825 kb on + strand at 1934.826 kb on + strand at 1934.836 kb on + strand at 1934.837 kb on + strand at 1934.844 kb on - strand at 1934.844 kb on - strand at 1934.894 kb on + strand at 1934.900 kb on - strand at 1934.983 kb on - strand at 1934.983 kb on - strand at 1935.024 kb on - strand at 1935.035 kb on - strand at 1935.054 kb on + strand at 1935.076 kb on - strand at 1935.107 kb on + strand at 1935.114 kb on - strand at 1935.116 kb on - strand at 1935.174 kb on + strand at 1935.214 kb on - strand at 1935.231 kb on + strand, within MPMX20_01841 at 1935.256 kb on - strand, within MPMX20_01841 at 1935.261 kb on - strand, within MPMX20_01841 at 1935.285 kb on - strand, within MPMX20_01841 at 1935.451 kb on - strand, within MPMX20_01841 at 1935.451 kb on - strand, within MPMX20_01841 at 1935.495 kb on + strand, within MPMX20_01841 at 1935.514 kb on + strand, within MPMX20_01841 at 1935.551 kb on + strand, within MPMX20_01841 at 1935.588 kb on - strand, within MPMX20_01841 at 1935.590 kb on + strand, within MPMX20_01841 at 1935.593 kb on - strand, within MPMX20_01841 at 1935.606 kb on - strand, within MPMX20_01841 at 1935.643 kb on + strand, within MPMX20_01841 at 1935.653 kb on - strand, within MPMX20_01841 at 1935.674 kb on + strand, within MPMX20_01841 at 1935.674 kb on + strand, within MPMX20_01841 at 1935.682 kb on - strand, within MPMX20_01841 at 1935.709 kb on + strand, within MPMX20_01841 at 1935.709 kb on + strand, within MPMX20_01841
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 1,931,822 + MPMX20_01839 0.31 -1.2 1,931,833 + MPMX20_01839 0.32 +1.4 1,931,855 + MPMX20_01839 0.33 +2.6 1,931,856 + MPMX20_01839 0.33 +0.6 1,931,882 + MPMX20_01839 0.35 -1.4 1,931,882 + MPMX20_01839 0.35 -1.9 1,931,890 - MPMX20_01839 0.36 +2.1 1,931,890 - MPMX20_01839 0.36 +1.2 1,931,896 + MPMX20_01839 0.36 +2.2 1,931,932 + MPMX20_01839 0.39 -0.4 1,931,940 - MPMX20_01839 0.40 +3.8 1,931,947 + MPMX20_01839 0.40 +0.9 1,931,988 + MPMX20_01839 0.43 +1.8 1,931,988 + MPMX20_01839 0.43 +0.2 1,931,988 + MPMX20_01839 0.43 +0.6 1,931,988 + MPMX20_01839 0.43 -0.1 1,931,988 + MPMX20_01839 0.43 -0.8 1,931,996 - MPMX20_01839 0.44 +2.0 1,931,996 - MPMX20_01839 0.44 +1.5 1,932,016 + MPMX20_01839 0.45 +1.2 1,932,070 - MPMX20_01839 0.49 +1.1 1,932,098 + MPMX20_01839 0.51 +1.4 1,932,106 - MPMX20_01839 0.52 +0.2 1,932,110 + MPMX20_01839 0.52 +0.4 1,932,141 - MPMX20_01839 0.54 +0.8 1,932,172 + MPMX20_01839 0.57 +0.7 1,932,191 + MPMX20_01839 0.58 +1.6 1,932,191 + MPMX20_01839 0.58 +0.7 1,932,228 - MPMX20_01839 0.61 -0.4 1,932,239 + MPMX20_01839 0.62 +0.2 1,932,354 + MPMX20_01839 0.70 -0.6 1,932,380 + MPMX20_01839 0.72 +1.2 1,932,382 - MPMX20_01839 0.72 +0.6 1,932,466 - MPMX20_01839 0.78 +0.3 1,932,511 + MPMX20_01839 0.82 +0.8 1,932,672 + +2.1 1,932,693 - +2.1 1,932,694 + +1.5 1,932,721 + +0.7 1,932,729 - +0.2 1,932,729 - -0.4 1,932,729 - -0.3 1,933,118 + MPMX20_01840 0.17 +2.0 1,933,249 - MPMX20_01840 0.24 +1.5 1,933,256 + MPMX20_01840 0.24 +1.7 1,933,312 - MPMX20_01840 0.27 +1.3 1,933,333 - MPMX20_01840 0.28 -0.4 1,933,416 + MPMX20_01840 0.33 +0.0 1,933,421 + MPMX20_01840 0.33 +0.5 1,933,458 - MPMX20_01840 0.35 +1.5 1,933,477 - MPMX20_01840 0.36 +0.7 1,933,479 - MPMX20_01840 0.36 +2.0 1,933,507 + MPMX20_01840 0.37 +1.8 1,933,509 + MPMX20_01840 0.37 -0.1 1,933,632 - MPMX20_01840 0.44 -0.8 1,933,635 + MPMX20_01840 0.44 +1.6 1,933,661 - MPMX20_01840 0.45 +2.1 1,933,710 + MPMX20_01840 0.48 +1.0 1,933,710 + MPMX20_01840 0.48 +1.8 1,933,710 + MPMX20_01840 0.48 +2.1 1,933,718 - MPMX20_01840 0.48 +2.5 1,933,718 - MPMX20_01840 0.48 +1.6 1,933,718 - MPMX20_01840 0.48 +0.6 1,933,865 - MPMX20_01840 0.56 +1.5 1,933,897 - MPMX20_01840 0.57 +0.8 1,933,897 - MPMX20_01840 0.57 +2.2 1,933,974 - MPMX20_01840 0.61 +2.4 1,934,010 - MPMX20_01840 0.63 +1.2 1,934,054 + MPMX20_01840 0.65 +0.4 1,934,183 + MPMX20_01840 0.72 +2.3 1,934,207 + MPMX20_01840 0.73 +0.8 1,934,284 + MPMX20_01840 0.77 -1.4 1,934,391 - MPMX20_01840 0.83 +0.3 1,934,423 + MPMX20_01840 0.85 +1.2 1,934,461 - MPMX20_01840 0.87 +1.1 1,934,475 + MPMX20_01840 0.87 +0.2 1,934,483 + MPMX20_01840 0.88 +0.9 1,934,483 + MPMX20_01840 0.88 +1.0 1,934,483 + MPMX20_01840 0.88 +1.1 1,934,483 + MPMX20_01840 0.88 +1.6 1,934,614 + +1.2 1,934,614 + -1.1 1,934,614 + +0.7 1,934,614 + +1.2 1,934,622 - +1.3 1,934,622 - +0.9 1,934,661 - +1.5 1,934,668 + +2.2 1,934,668 + +1.6 1,934,668 - -0.6 1,934,751 + +0.3 1,934,751 + +1.4 1,934,751 + +1.1 1,934,751 + +0.1 1,934,751 + +1.1 1,934,752 + +0.4 1,934,759 - +1.2 1,934,759 - +0.6 1,934,759 - +1.3 1,934,759 - +0.2 1,934,759 - +0.9 1,934,759 - +1.2 1,934,760 - +0.9 1,934,760 - +1.4 1,934,760 - +0.7 1,934,788 + +1.4 1,934,805 + +1.4 1,934,805 + +1.6 1,934,825 + +1.0 1,934,826 + +1.2 1,934,836 + -0.4 1,934,837 + +0.6 1,934,844 - -0.4 1,934,844 - +0.9 1,934,894 + +1.0 1,934,900 - -1.1 1,934,983 - -0.8 1,934,983 - +0.7 1,935,024 - -0.8 1,935,035 - -1.4 1,935,054 + +1.5 1,935,076 - -1.5 1,935,107 + +0.0 1,935,114 - -0.0 1,935,116 - -1.8 1,935,174 + -0.1 1,935,214 - -0.2 1,935,231 + MPMX20_01841 0.10 +0.8 1,935,256 - MPMX20_01841 0.14 -0.3 1,935,261 - MPMX20_01841 0.14 +0.9 1,935,285 - MPMX20_01841 0.17 +2.3 1,935,451 - MPMX20_01841 0.40 +0.8 1,935,451 - MPMX20_01841 0.40 +0.9 1,935,495 + MPMX20_01841 0.45 +0.5 1,935,514 + MPMX20_01841 0.48 +0.2 1,935,551 + MPMX20_01841 0.53 +1.2 1,935,588 - MPMX20_01841 0.58 +0.1 1,935,590 + MPMX20_01841 0.58 +1.4 1,935,593 - MPMX20_01841 0.59 -2.6 1,935,606 - MPMX20_01841 0.60 +0.1 1,935,643 + MPMX20_01841 0.65 +0.0 1,935,653 - MPMX20_01841 0.67 +0.8 1,935,674 + MPMX20_01841 0.69 -0.7 1,935,674 + MPMX20_01841 0.69 +0.7 1,935,682 - MPMX20_01841 0.70 +0.2 1,935,709 + MPMX20_01841 0.74 +0.1 1,935,709 + MPMX20_01841 0.74 +0.1
Or see this region's nucleotide sequence