Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01840

Experiment: L-Histidine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01839 and MPMX20_01840 are separated by 27 nucleotidesMPMX20_01840 and MPMX20_01841 are separated by 432 nucleotides MPMX20_01839: MPMX20_01839 - hypothetical protein, at 1,931,404 to 1,932,759 _01839 MPMX20_01840: MPMX20_01840 - hypothetical protein, at 1,932,787 to 1,934,721 _01840 MPMX20_01841: MPMX20_01841 - MltA-interacting protein, at 1,935,154 to 1,935,903 _01841 Position (kb) 1932 1933 1934 1935Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1931.822 kb on + strand, within MPMX20_01839at 1931.833 kb on + strand, within MPMX20_01839at 1931.855 kb on + strand, within MPMX20_01839at 1931.856 kb on + strand, within MPMX20_01839at 1931.882 kb on + strand, within MPMX20_01839at 1931.882 kb on + strand, within MPMX20_01839at 1931.890 kb on - strand, within MPMX20_01839at 1931.890 kb on - strand, within MPMX20_01839at 1931.896 kb on + strand, within MPMX20_01839at 1931.932 kb on + strand, within MPMX20_01839at 1931.940 kb on - strand, within MPMX20_01839at 1931.947 kb on + strand, within MPMX20_01839at 1931.988 kb on + strand, within MPMX20_01839at 1931.988 kb on + strand, within MPMX20_01839at 1931.988 kb on + strand, within MPMX20_01839at 1931.988 kb on + strand, within MPMX20_01839at 1931.988 kb on + strand, within MPMX20_01839at 1931.996 kb on - strand, within MPMX20_01839at 1931.996 kb on - strand, within MPMX20_01839at 1932.016 kb on + strand, within MPMX20_01839at 1932.070 kb on - strand, within MPMX20_01839at 1932.098 kb on + strand, within MPMX20_01839at 1932.106 kb on - strand, within MPMX20_01839at 1932.110 kb on + strand, within MPMX20_01839at 1932.141 kb on - strand, within MPMX20_01839at 1932.172 kb on + strand, within MPMX20_01839at 1932.191 kb on + strand, within MPMX20_01839at 1932.191 kb on + strand, within MPMX20_01839at 1932.228 kb on - strand, within MPMX20_01839at 1932.239 kb on + strand, within MPMX20_01839at 1932.354 kb on + strand, within MPMX20_01839at 1932.380 kb on + strand, within MPMX20_01839at 1932.382 kb on - strand, within MPMX20_01839at 1932.466 kb on - strand, within MPMX20_01839at 1932.511 kb on + strand, within MPMX20_01839at 1932.672 kb on + strandat 1932.693 kb on - strandat 1932.694 kb on + strandat 1932.721 kb on + strandat 1932.729 kb on - strandat 1932.729 kb on - strandat 1932.729 kb on - strandat 1933.118 kb on + strand, within MPMX20_01840at 1933.249 kb on - strand, within MPMX20_01840at 1933.256 kb on + strand, within MPMX20_01840at 1933.312 kb on - strand, within MPMX20_01840at 1933.333 kb on - strand, within MPMX20_01840at 1933.416 kb on + strand, within MPMX20_01840at 1933.421 kb on + strand, within MPMX20_01840at 1933.458 kb on - strand, within MPMX20_01840at 1933.477 kb on - strand, within MPMX20_01840at 1933.479 kb on - strand, within MPMX20_01840at 1933.507 kb on + strand, within MPMX20_01840at 1933.509 kb on + strand, within MPMX20_01840at 1933.632 kb on - strand, within MPMX20_01840at 1933.635 kb on + strand, within MPMX20_01840at 1933.661 kb on - strand, within MPMX20_01840at 1933.710 kb on + strand, within MPMX20_01840at 1933.710 kb on + strand, within MPMX20_01840at 1933.710 kb on + strand, within MPMX20_01840at 1933.718 kb on - strand, within MPMX20_01840at 1933.718 kb on - strand, within MPMX20_01840at 1933.718 kb on - strand, within MPMX20_01840at 1933.865 kb on - strand, within MPMX20_01840at 1933.897 kb on - strand, within MPMX20_01840at 1933.897 kb on - strand, within MPMX20_01840at 1933.974 kb on - strand, within MPMX20_01840at 1934.010 kb on - strand, within MPMX20_01840at 1934.054 kb on + strand, within MPMX20_01840at 1934.183 kb on + strand, within MPMX20_01840at 1934.207 kb on + strand, within MPMX20_01840at 1934.284 kb on + strand, within MPMX20_01840at 1934.391 kb on - strand, within MPMX20_01840at 1934.423 kb on + strand, within MPMX20_01840at 1934.461 kb on - strand, within MPMX20_01840at 1934.475 kb on + strand, within MPMX20_01840at 1934.483 kb on + strand, within MPMX20_01840at 1934.483 kb on + strand, within MPMX20_01840at 1934.483 kb on + strand, within MPMX20_01840at 1934.483 kb on + strand, within MPMX20_01840at 1934.614 kb on + strandat 1934.614 kb on + strandat 1934.614 kb on + strandat 1934.614 kb on + strandat 1934.622 kb on - strandat 1934.622 kb on - strandat 1934.661 kb on - strandat 1934.668 kb on + strandat 1934.668 kb on + strandat 1934.668 kb on - strandat 1934.751 kb on + strandat 1934.751 kb on + strandat 1934.751 kb on + strandat 1934.751 kb on + strandat 1934.751 kb on + strandat 1934.752 kb on + strandat 1934.759 kb on - strandat 1934.759 kb on - strandat 1934.759 kb on - strandat 1934.759 kb on - strandat 1934.759 kb on - strandat 1934.759 kb on - strandat 1934.760 kb on - strandat 1934.760 kb on - strandat 1934.760 kb on - strandat 1934.788 kb on + strandat 1934.805 kb on + strandat 1934.805 kb on + strandat 1934.825 kb on + strandat 1934.826 kb on + strandat 1934.836 kb on + strandat 1934.837 kb on + strandat 1934.844 kb on - strandat 1934.844 kb on - strandat 1934.894 kb on + strandat 1934.900 kb on - strandat 1934.983 kb on - strandat 1934.983 kb on - strandat 1935.024 kb on - strandat 1935.035 kb on - strandat 1935.054 kb on + strandat 1935.076 kb on - strandat 1935.107 kb on + strandat 1935.114 kb on - strandat 1935.116 kb on - strandat 1935.174 kb on + strandat 1935.214 kb on - strandat 1935.231 kb on + strand, within MPMX20_01841at 1935.256 kb on - strand, within MPMX20_01841at 1935.261 kb on - strand, within MPMX20_01841at 1935.285 kb on - strand, within MPMX20_01841at 1935.451 kb on - strand, within MPMX20_01841at 1935.451 kb on - strand, within MPMX20_01841at 1935.495 kb on + strand, within MPMX20_01841at 1935.514 kb on + strand, within MPMX20_01841at 1935.551 kb on + strand, within MPMX20_01841at 1935.588 kb on - strand, within MPMX20_01841at 1935.590 kb on + strand, within MPMX20_01841at 1935.593 kb on - strand, within MPMX20_01841at 1935.606 kb on - strand, within MPMX20_01841at 1935.643 kb on + strand, within MPMX20_01841at 1935.653 kb on - strand, within MPMX20_01841at 1935.674 kb on + strand, within MPMX20_01841at 1935.674 kb on + strand, within MPMX20_01841at 1935.682 kb on - strand, within MPMX20_01841at 1935.709 kb on + strand, within MPMX20_01841at 1935.709 kb on + strand, within MPMX20_01841

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (C)
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1,931,822 + MPMX20_01839 0.31 -1.2
1,931,833 + MPMX20_01839 0.32 +1.4
1,931,855 + MPMX20_01839 0.33 +2.6
1,931,856 + MPMX20_01839 0.33 +0.6
1,931,882 + MPMX20_01839 0.35 -1.4
1,931,882 + MPMX20_01839 0.35 -1.9
1,931,890 - MPMX20_01839 0.36 +2.1
1,931,890 - MPMX20_01839 0.36 +1.2
1,931,896 + MPMX20_01839 0.36 +2.2
1,931,932 + MPMX20_01839 0.39 -0.4
1,931,940 - MPMX20_01839 0.40 +3.8
1,931,947 + MPMX20_01839 0.40 +0.9
1,931,988 + MPMX20_01839 0.43 +1.8
1,931,988 + MPMX20_01839 0.43 +0.2
1,931,988 + MPMX20_01839 0.43 +0.6
1,931,988 + MPMX20_01839 0.43 -0.1
1,931,988 + MPMX20_01839 0.43 -0.8
1,931,996 - MPMX20_01839 0.44 +2.0
1,931,996 - MPMX20_01839 0.44 +1.5
1,932,016 + MPMX20_01839 0.45 +1.2
1,932,070 - MPMX20_01839 0.49 +1.1
1,932,098 + MPMX20_01839 0.51 +1.4
1,932,106 - MPMX20_01839 0.52 +0.2
1,932,110 + MPMX20_01839 0.52 +0.4
1,932,141 - MPMX20_01839 0.54 +0.8
1,932,172 + MPMX20_01839 0.57 +0.7
1,932,191 + MPMX20_01839 0.58 +1.6
1,932,191 + MPMX20_01839 0.58 +0.7
1,932,228 - MPMX20_01839 0.61 -0.4
1,932,239 + MPMX20_01839 0.62 +0.2
1,932,354 + MPMX20_01839 0.70 -0.6
1,932,380 + MPMX20_01839 0.72 +1.2
1,932,382 - MPMX20_01839 0.72 +0.6
1,932,466 - MPMX20_01839 0.78 +0.3
1,932,511 + MPMX20_01839 0.82 +0.8
1,932,672 + +2.1
1,932,693 - +2.1
1,932,694 + +1.5
1,932,721 + +0.7
1,932,729 - +0.2
1,932,729 - -0.4
1,932,729 - -0.3
1,933,118 + MPMX20_01840 0.17 +2.0
1,933,249 - MPMX20_01840 0.24 +1.5
1,933,256 + MPMX20_01840 0.24 +1.7
1,933,312 - MPMX20_01840 0.27 +1.3
1,933,333 - MPMX20_01840 0.28 -0.4
1,933,416 + MPMX20_01840 0.33 +0.0
1,933,421 + MPMX20_01840 0.33 +0.5
1,933,458 - MPMX20_01840 0.35 +1.5
1,933,477 - MPMX20_01840 0.36 +0.7
1,933,479 - MPMX20_01840 0.36 +2.0
1,933,507 + MPMX20_01840 0.37 +1.8
1,933,509 + MPMX20_01840 0.37 -0.1
1,933,632 - MPMX20_01840 0.44 -0.8
1,933,635 + MPMX20_01840 0.44 +1.6
1,933,661 - MPMX20_01840 0.45 +2.1
1,933,710 + MPMX20_01840 0.48 +1.0
1,933,710 + MPMX20_01840 0.48 +1.8
1,933,710 + MPMX20_01840 0.48 +2.1
1,933,718 - MPMX20_01840 0.48 +2.5
1,933,718 - MPMX20_01840 0.48 +1.6
1,933,718 - MPMX20_01840 0.48 +0.6
1,933,865 - MPMX20_01840 0.56 +1.5
1,933,897 - MPMX20_01840 0.57 +0.8
1,933,897 - MPMX20_01840 0.57 +2.2
1,933,974 - MPMX20_01840 0.61 +2.4
1,934,010 - MPMX20_01840 0.63 +1.2
1,934,054 + MPMX20_01840 0.65 +0.4
1,934,183 + MPMX20_01840 0.72 +2.3
1,934,207 + MPMX20_01840 0.73 +0.8
1,934,284 + MPMX20_01840 0.77 -1.4
1,934,391 - MPMX20_01840 0.83 +0.3
1,934,423 + MPMX20_01840 0.85 +1.2
1,934,461 - MPMX20_01840 0.87 +1.1
1,934,475 + MPMX20_01840 0.87 +0.2
1,934,483 + MPMX20_01840 0.88 +0.9
1,934,483 + MPMX20_01840 0.88 +1.0
1,934,483 + MPMX20_01840 0.88 +1.1
1,934,483 + MPMX20_01840 0.88 +1.6
1,934,614 + +1.2
1,934,614 + -1.1
1,934,614 + +0.7
1,934,614 + +1.2
1,934,622 - +1.3
1,934,622 - +0.9
1,934,661 - +1.5
1,934,668 + +2.2
1,934,668 + +1.6
1,934,668 - -0.6
1,934,751 + +0.3
1,934,751 + +1.4
1,934,751 + +1.1
1,934,751 + +0.1
1,934,751 + +1.1
1,934,752 + +0.4
1,934,759 - +1.2
1,934,759 - +0.6
1,934,759 - +1.3
1,934,759 - +0.2
1,934,759 - +0.9
1,934,759 - +1.2
1,934,760 - +0.9
1,934,760 - +1.4
1,934,760 - +0.7
1,934,788 + +1.4
1,934,805 + +1.4
1,934,805 + +1.6
1,934,825 + +1.0
1,934,826 + +1.2
1,934,836 + -0.4
1,934,837 + +0.6
1,934,844 - -0.4
1,934,844 - +0.9
1,934,894 + +1.0
1,934,900 - -1.1
1,934,983 - -0.8
1,934,983 - +0.7
1,935,024 - -0.8
1,935,035 - -1.4
1,935,054 + +1.5
1,935,076 - -1.5
1,935,107 + +0.0
1,935,114 - -0.0
1,935,116 - -1.8
1,935,174 + -0.1
1,935,214 - -0.2
1,935,231 + MPMX20_01841 0.10 +0.8
1,935,256 - MPMX20_01841 0.14 -0.3
1,935,261 - MPMX20_01841 0.14 +0.9
1,935,285 - MPMX20_01841 0.17 +2.3
1,935,451 - MPMX20_01841 0.40 +0.8
1,935,451 - MPMX20_01841 0.40 +0.9
1,935,495 + MPMX20_01841 0.45 +0.5
1,935,514 + MPMX20_01841 0.48 +0.2
1,935,551 + MPMX20_01841 0.53 +1.2
1,935,588 - MPMX20_01841 0.58 +0.1
1,935,590 + MPMX20_01841 0.58 +1.4
1,935,593 - MPMX20_01841 0.59 -2.6
1,935,606 - MPMX20_01841 0.60 +0.1
1,935,643 + MPMX20_01841 0.65 +0.0
1,935,653 - MPMX20_01841 0.67 +0.8
1,935,674 + MPMX20_01841 0.69 -0.7
1,935,674 + MPMX20_01841 0.69 +0.7
1,935,682 - MPMX20_01841 0.70 +0.2
1,935,709 + MPMX20_01841 0.74 +0.1
1,935,709 + MPMX20_01841 0.74 +0.1

Or see this region's nucleotide sequence