Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00449

Experiment: L-Histidine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00448 and MPMX20_00449 overlap by 8 nucleotidesMPMX20_00449 and MPMX20_00450 overlap by 50 nucleotides MPMX20_00448: MPMX20_00448 - Bifunctional NAD(P)H-hydrate repair enzyme Nnr, at 461,922 to 463,430 _00448 MPMX20_00449: MPMX20_00449 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaE, at 463,423 to 463,884 _00449 MPMX20_00450: MPMX20_00450 - N-acetylmuramoyl-L-alanine amidase AmiB, at 463,835 to 465,247 _00450 Position (kb) 463 464Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 462.466 kb on - strand, within MPMX20_00448at 462.466 kb on - strand, within MPMX20_00448at 462.490 kb on + strand, within MPMX20_00448at 462.553 kb on - strand, within MPMX20_00448at 462.558 kb on + strand, within MPMX20_00448at 462.566 kb on - strand, within MPMX20_00448at 462.628 kb on + strand, within MPMX20_00448at 462.653 kb on + strand, within MPMX20_00448at 462.691 kb on - strand, within MPMX20_00448at 462.754 kb on + strand, within MPMX20_00448at 462.816 kb on - strand, within MPMX20_00448at 462.865 kb on + strand, within MPMX20_00448at 462.892 kb on + strand, within MPMX20_00448at 462.905 kb on + strand, within MPMX20_00448at 462.972 kb on + strand, within MPMX20_00448at 462.973 kb on + strand, within MPMX20_00448at 462.980 kb on - strand, within MPMX20_00448at 463.153 kb on - strand, within MPMX20_00448at 463.163 kb on - strand, within MPMX20_00448at 463.181 kb on - strand, within MPMX20_00448at 463.232 kb on - strand, within MPMX20_00448at 463.885 kb on + strandat 463.893 kb on - strandat 463.893 kb on - strandat 463.893 kb on - strandat 463.893 kb on - strandat 463.920 kb on - strandat 463.965 kb on - strandat 463.965 kb on - strandat 464.003 kb on + strand, within MPMX20_00450at 464.025 kb on + strand, within MPMX20_00450at 464.037 kb on + strand, within MPMX20_00450at 464.105 kb on + strand, within MPMX20_00450at 464.105 kb on + strand, within MPMX20_00450at 464.113 kb on - strand, within MPMX20_00450at 464.113 kb on - strand, within MPMX20_00450at 464.216 kb on + strand, within MPMX20_00450at 464.216 kb on + strand, within MPMX20_00450at 464.223 kb on - strand, within MPMX20_00450at 464.224 kb on - strand, within MPMX20_00450at 464.253 kb on + strand, within MPMX20_00450at 464.347 kb on + strand, within MPMX20_00450at 464.347 kb on + strand, within MPMX20_00450at 464.347 kb on + strand, within MPMX20_00450at 464.348 kb on + strand, within MPMX20_00450at 464.364 kb on + strand, within MPMX20_00450at 464.433 kb on - strand, within MPMX20_00450at 464.594 kb on + strand, within MPMX20_00450at 464.596 kb on + strand, within MPMX20_00450at 464.604 kb on - strand, within MPMX20_00450at 464.622 kb on - strand, within MPMX20_00450at 464.675 kb on - strand, within MPMX20_00450at 464.680 kb on - strand, within MPMX20_00450at 464.734 kb on + strand, within MPMX20_00450at 464.748 kb on - strand, within MPMX20_00450at 464.750 kb on + strand, within MPMX20_00450at 464.764 kb on - strand, within MPMX20_00450at 464.802 kb on + strand, within MPMX20_00450at 464.802 kb on + strand, within MPMX20_00450at 464.810 kb on - strand, within MPMX20_00450at 464.831 kb on + strand, within MPMX20_00450at 464.831 kb on + strand, within MPMX20_00450at 464.839 kb on - strand, within MPMX20_00450at 464.839 kb on - strand, within MPMX20_00450

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (C)
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462,466 - MPMX20_00448 0.36 +1.2
462,466 - MPMX20_00448 0.36 -0.0
462,490 + MPMX20_00448 0.38 -1.7
462,553 - MPMX20_00448 0.42 +0.1
462,558 + MPMX20_00448 0.42 -0.8
462,566 - MPMX20_00448 0.43 +0.3
462,628 + MPMX20_00448 0.47 +0.3
462,653 + MPMX20_00448 0.48 -0.5
462,691 - MPMX20_00448 0.51 -0.1
462,754 + MPMX20_00448 0.55 +0.1
462,816 - MPMX20_00448 0.59 +0.9
462,865 + MPMX20_00448 0.62 -0.0
462,892 + MPMX20_00448 0.64 -0.4
462,905 + MPMX20_00448 0.65 -0.8
462,972 + MPMX20_00448 0.70 -0.9
462,973 + MPMX20_00448 0.70 +0.2
462,980 - MPMX20_00448 0.70 -0.1
463,153 - MPMX20_00448 0.82 +1.2
463,163 - MPMX20_00448 0.82 +3.5
463,181 - MPMX20_00448 0.83 +0.3
463,232 - MPMX20_00448 0.87 -0.5
463,885 + +0.4
463,893 - +0.2
463,893 - -0.2
463,893 - +0.8
463,893 - +0.9
463,920 - +0.7
463,965 - -0.2
463,965 - +0.4
464,003 + MPMX20_00450 0.12 +0.0
464,025 + MPMX20_00450 0.13 +0.1
464,037 + MPMX20_00450 0.14 -0.4
464,105 + MPMX20_00450 0.19 -1.1
464,105 + MPMX20_00450 0.19 -0.9
464,113 - MPMX20_00450 0.20 -0.1
464,113 - MPMX20_00450 0.20 +0.2
464,216 + MPMX20_00450 0.27 +0.4
464,216 + MPMX20_00450 0.27 -3.1
464,223 - MPMX20_00450 0.27 -1.0
464,224 - MPMX20_00450 0.28 -0.4
464,253 + MPMX20_00450 0.30 +1.2
464,347 + MPMX20_00450 0.36 -0.9
464,347 + MPMX20_00450 0.36 -0.9
464,347 + MPMX20_00450 0.36 -0.7
464,348 + MPMX20_00450 0.36 +0.2
464,364 + MPMX20_00450 0.37 -0.0
464,433 - MPMX20_00450 0.42 -0.5
464,594 + MPMX20_00450 0.54 +0.2
464,596 + MPMX20_00450 0.54 -1.2
464,604 - MPMX20_00450 0.54 -0.2
464,622 - MPMX20_00450 0.56 +0.9
464,675 - MPMX20_00450 0.59 +1.2
464,680 - MPMX20_00450 0.60 +0.7
464,734 + MPMX20_00450 0.64 -0.2
464,748 - MPMX20_00450 0.65 -0.3
464,750 + MPMX20_00450 0.65 -1.1
464,764 - MPMX20_00450 0.66 -0.0
464,802 + MPMX20_00450 0.68 +0.4
464,802 + MPMX20_00450 0.68 +0.3
464,810 - MPMX20_00450 0.69 -0.3
464,831 + MPMX20_00450 0.70 +0.5
464,831 + MPMX20_00450 0.70 -0.2
464,839 - MPMX20_00450 0.71 -0.5
464,839 - MPMX20_00450 0.71 +0.3

Or see this region's nucleotide sequence