Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04038

Experiment: L-Arginine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04037 and MPMX20_04038 are separated by 34 nucleotidesMPMX20_04038 and MPMX20_04039 are separated by 251 nucleotides MPMX20_04037: MPMX20_04037 - Galactarate dehydratase (L-threo-forming), at 4,234,274 to 4,235,845 _04037 MPMX20_04038: MPMX20_04038 - Glucitol operon repressor, at 4,235,880 to 4,236,689 _04038 MPMX20_04039: MPMX20_04039 - D-tagatose-1,6-bisphosphate aldolase subunit KbaZ, at 4,236,941 to 4,238,236 _04039 Position (kb) 4235 4236 4237Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4234.907 kb on + strand, within MPMX20_04037at 4234.907 kb on + strand, within MPMX20_04037at 4234.915 kb on - strand, within MPMX20_04037at 4234.915 kb on - strand, within MPMX20_04037at 4234.984 kb on + strand, within MPMX20_04037at 4234.984 kb on + strand, within MPMX20_04037at 4234.984 kb on + strand, within MPMX20_04037at 4234.984 kb on + strand, within MPMX20_04037at 4234.984 kb on + strand, within MPMX20_04037at 4234.992 kb on - strand, within MPMX20_04037at 4234.997 kb on - strand, within MPMX20_04037at 4235.101 kb on - strand, within MPMX20_04037at 4235.116 kb on - strand, within MPMX20_04037at 4235.119 kb on + strand, within MPMX20_04037at 4235.177 kb on + strand, within MPMX20_04037at 4235.190 kb on + strand, within MPMX20_04037at 4235.232 kb on - strand, within MPMX20_04037at 4235.286 kb on + strand, within MPMX20_04037at 4235.286 kb on + strand, within MPMX20_04037at 4235.294 kb on - strand, within MPMX20_04037at 4235.294 kb on - strand, within MPMX20_04037at 4235.320 kb on + strand, within MPMX20_04037at 4235.449 kb on + strand, within MPMX20_04037at 4235.465 kb on + strand, within MPMX20_04037at 4235.472 kb on + strand, within MPMX20_04037at 4235.511 kb on - strand, within MPMX20_04037at 4235.554 kb on - strand, within MPMX20_04037at 4235.607 kb on + strand, within MPMX20_04037at 4235.643 kb on + strand, within MPMX20_04037at 4235.678 kb on - strand, within MPMX20_04037at 4235.702 kb on - strandat 4235.713 kb on - strandat 4235.730 kb on + strandat 4235.758 kb on - strandat 4235.769 kb on + strandat 4235.789 kb on + strandat 4235.821 kb on + strandat 4235.829 kb on - strandat 4235.829 kb on - strandat 4235.829 kb on - strandat 4235.829 kb on - strandat 4235.829 kb on - strandat 4235.859 kb on + strandat 4235.900 kb on + strandat 4235.900 kb on + strandat 4235.911 kb on + strandat 4235.919 kb on - strandat 4235.938 kb on + strandat 4235.999 kb on + strand, within MPMX20_04038at 4236.236 kb on + strand, within MPMX20_04038at 4236.236 kb on + strand, within MPMX20_04038at 4236.244 kb on - strand, within MPMX20_04038at 4236.244 kb on - strand, within MPMX20_04038at 4236.244 kb on - strand, within MPMX20_04038at 4236.244 kb on - strand, within MPMX20_04038at 4236.244 kb on - strand, within MPMX20_04038at 4236.309 kb on - strand, within MPMX20_04038at 4236.325 kb on - strand, within MPMX20_04038at 4236.325 kb on - strand, within MPMX20_04038at 4236.373 kb on + strand, within MPMX20_04038at 4236.381 kb on - strand, within MPMX20_04038at 4236.411 kb on - strand, within MPMX20_04038at 4236.416 kb on + strand, within MPMX20_04038at 4236.441 kb on - strand, within MPMX20_04038at 4236.452 kb on + strand, within MPMX20_04038at 4236.452 kb on + strand, within MPMX20_04038at 4236.508 kb on + strand, within MPMX20_04038at 4236.591 kb on - strand, within MPMX20_04038at 4236.601 kb on - strand, within MPMX20_04038at 4236.637 kb on - strandat 4236.692 kb on - strandat 4236.807 kb on - strandat 4236.937 kb on - strandat 4236.994 kb on + strandat 4237.057 kb on + strandat 4237.060 kb on - strandat 4237.086 kb on + strand, within MPMX20_04039at 4237.170 kb on + strand, within MPMX20_04039at 4237.219 kb on - strand, within MPMX20_04039at 4237.271 kb on + strand, within MPMX20_04039at 4237.276 kb on + strand, within MPMX20_04039at 4237.290 kb on + strand, within MPMX20_04039at 4237.293 kb on - strand, within MPMX20_04039at 4237.313 kb on + strand, within MPMX20_04039at 4237.332 kb on + strand, within MPMX20_04039at 4237.434 kb on + strand, within MPMX20_04039at 4237.439 kb on + strand, within MPMX20_04039at 4237.447 kb on - strand, within MPMX20_04039at 4237.447 kb on - strand, within MPMX20_04039at 4237.447 kb on - strand, within MPMX20_04039at 4237.447 kb on - strand, within MPMX20_04039at 4237.452 kb on - strand, within MPMX20_04039at 4237.452 kb on - strand, within MPMX20_04039at 4237.480 kb on - strand, within MPMX20_04039at 4237.527 kb on - strand, within MPMX20_04039at 4237.539 kb on + strand, within MPMX20_04039at 4237.548 kb on - strand, within MPMX20_04039at 4237.560 kb on - strand, within MPMX20_04039at 4237.626 kb on - strand, within MPMX20_04039at 4237.646 kb on - strand, within MPMX20_04039

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (C)
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4,234,907 + MPMX20_04037 0.40 +0.6
4,234,907 + MPMX20_04037 0.40 +1.1
4,234,915 - MPMX20_04037 0.41 +0.8
4,234,915 - MPMX20_04037 0.41 -0.9
4,234,984 + MPMX20_04037 0.45 -0.8
4,234,984 + MPMX20_04037 0.45 +1.1
4,234,984 + MPMX20_04037 0.45 +0.7
4,234,984 + MPMX20_04037 0.45 -1.3
4,234,984 + MPMX20_04037 0.45 +0.4
4,234,992 - MPMX20_04037 0.46 +0.5
4,234,997 - MPMX20_04037 0.46 -1.3
4,235,101 - MPMX20_04037 0.53 -1.0
4,235,116 - MPMX20_04037 0.54 +1.9
4,235,119 + MPMX20_04037 0.54 +0.8
4,235,177 + MPMX20_04037 0.57 +1.0
4,235,190 + MPMX20_04037 0.58 -1.1
4,235,232 - MPMX20_04037 0.61 -0.8
4,235,286 + MPMX20_04037 0.64 +1.0
4,235,286 + MPMX20_04037 0.64 +0.7
4,235,294 - MPMX20_04037 0.65 +0.1
4,235,294 - MPMX20_04037 0.65 +1.4
4,235,320 + MPMX20_04037 0.67 -0.1
4,235,449 + MPMX20_04037 0.75 -0.4
4,235,465 + MPMX20_04037 0.76 -0.3
4,235,472 + MPMX20_04037 0.76 +1.3
4,235,511 - MPMX20_04037 0.79 +1.4
4,235,554 - MPMX20_04037 0.81 +0.1
4,235,607 + MPMX20_04037 0.85 -0.0
4,235,643 + MPMX20_04037 0.87 +0.6
4,235,678 - MPMX20_04037 0.89 +0.2
4,235,702 - -0.2
4,235,713 - -0.2
4,235,730 + -1.1
4,235,758 - +1.0
4,235,769 + +0.1
4,235,789 + +1.6
4,235,821 + -0.7
4,235,829 - +0.4
4,235,829 - +0.1
4,235,829 - +0.7
4,235,829 - +0.4
4,235,829 - +0.4
4,235,859 + -0.3
4,235,900 + +2.1
4,235,900 + -0.2
4,235,911 + -1.1
4,235,919 - -0.2
4,235,938 + -0.7
4,235,999 + MPMX20_04038 0.15 -1.3
4,236,236 + MPMX20_04038 0.44 -2.4
4,236,236 + MPMX20_04038 0.44 -1.8
4,236,244 - MPMX20_04038 0.45 -3.1
4,236,244 - MPMX20_04038 0.45 -1.5
4,236,244 - MPMX20_04038 0.45 -0.3
4,236,244 - MPMX20_04038 0.45 -0.1
4,236,244 - MPMX20_04038 0.45 -3.6
4,236,309 - MPMX20_04038 0.53 -0.8
4,236,325 - MPMX20_04038 0.55 -1.2
4,236,325 - MPMX20_04038 0.55 -2.1
4,236,373 + MPMX20_04038 0.61 -3.6
4,236,381 - MPMX20_04038 0.62 -1.9
4,236,411 - MPMX20_04038 0.66 -3.3
4,236,416 + MPMX20_04038 0.66 +0.8
4,236,441 - MPMX20_04038 0.69 -1.9
4,236,452 + MPMX20_04038 0.71 -0.2
4,236,452 + MPMX20_04038 0.71 -0.4
4,236,508 + MPMX20_04038 0.78 -2.2
4,236,591 - MPMX20_04038 0.88 -2.7
4,236,601 - MPMX20_04038 0.89 -1.9
4,236,637 - -2.1
4,236,692 - -1.5
4,236,807 - -2.7
4,236,937 - -1.1
4,236,994 + +0.8
4,237,057 + +0.2
4,237,060 - +0.1
4,237,086 + MPMX20_04039 0.11 +2.1
4,237,170 + MPMX20_04039 0.18 -0.3
4,237,219 - MPMX20_04039 0.21 +2.6
4,237,271 + MPMX20_04039 0.25 +0.1
4,237,276 + MPMX20_04039 0.26 -1.4
4,237,290 + MPMX20_04039 0.27 -0.1
4,237,293 - MPMX20_04039 0.27 +0.5
4,237,313 + MPMX20_04039 0.29 +1.2
4,237,332 + MPMX20_04039 0.30 -0.2
4,237,434 + MPMX20_04039 0.38 +0.5
4,237,439 + MPMX20_04039 0.38 +1.0
4,237,447 - MPMX20_04039 0.39 +1.1
4,237,447 - MPMX20_04039 0.39 -2.1
4,237,447 - MPMX20_04039 0.39 +0.1
4,237,447 - MPMX20_04039 0.39 +0.3
4,237,452 - MPMX20_04039 0.39 -0.1
4,237,452 - MPMX20_04039 0.39 +0.9
4,237,480 - MPMX20_04039 0.42 -0.4
4,237,527 - MPMX20_04039 0.45 -1.9
4,237,539 + MPMX20_04039 0.46 -0.0
4,237,548 - MPMX20_04039 0.47 +0.2
4,237,560 - MPMX20_04039 0.48 +0.4
4,237,626 - MPMX20_04039 0.53 +0.4
4,237,646 - MPMX20_04039 0.54 -1.4

Or see this region's nucleotide sequence