Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04649 and MPMX20_04650 are separated by 111 nucleotides MPMX20_04650 and MPMX20_04651 are separated by 72 nucleotides
MPMX20_04649: MPMX20_04649 - Multidrug resistance protein MdtL, at 4,869,127 to 4,870,302
_04649
MPMX20_04650: MPMX20_04650 - tRNA modification GTPase MnmE, at 4,870,414 to 4,871,778
_04650
MPMX20_04651: MPMX20_04651 - Membrane protein insertase YidC, at 4,871,851 to 4,873,494
_04651
Position (kb)
4870
4871
4872 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4869.423 kb on + strand, within MPMX20_04649 at 4869.439 kb on - strand, within MPMX20_04649 at 4869.480 kb on + strand, within MPMX20_04649 at 4869.482 kb on + strand, within MPMX20_04649 at 4869.490 kb on - strand, within MPMX20_04649 at 4869.509 kb on - strand, within MPMX20_04649 at 4869.553 kb on - strand, within MPMX20_04649 at 4869.575 kb on + strand, within MPMX20_04649 at 4869.575 kb on + strand, within MPMX20_04649 at 4869.575 kb on + strand, within MPMX20_04649 at 4869.585 kb on - strand, within MPMX20_04649 at 4869.630 kb on + strand, within MPMX20_04649 at 4869.666 kb on - strand, within MPMX20_04649 at 4869.671 kb on - strand, within MPMX20_04649 at 4869.717 kb on + strand, within MPMX20_04649 at 4869.717 kb on + strand, within MPMX20_04649 at 4869.723 kb on + strand, within MPMX20_04649 at 4869.725 kb on - strand, within MPMX20_04649 at 4869.725 kb on - strand, within MPMX20_04649 at 4869.750 kb on + strand, within MPMX20_04649 at 4869.796 kb on - strand, within MPMX20_04649 at 4869.818 kb on + strand, within MPMX20_04649 at 4869.826 kb on - strand, within MPMX20_04649 at 4869.895 kb on + strand, within MPMX20_04649 at 4869.902 kb on - strand, within MPMX20_04649 at 4870.016 kb on + strand, within MPMX20_04649 at 4870.024 kb on - strand, within MPMX20_04649 at 4870.026 kb on + strand, within MPMX20_04649 at 4870.028 kb on + strand, within MPMX20_04649 at 4870.033 kb on + strand, within MPMX20_04649 at 4870.036 kb on - strand, within MPMX20_04649 at 4870.041 kb on - strand, within MPMX20_04649 at 4870.053 kb on + strand, within MPMX20_04649 at 4870.054 kb on - strand, within MPMX20_04649 at 4870.061 kb on - strand, within MPMX20_04649 at 4870.084 kb on + strand, within MPMX20_04649 at 4870.092 kb on - strand, within MPMX20_04649 at 4870.298 kb on + strand at 4870.424 kb on + strand at 4870.498 kb on - strand at 4870.536 kb on + strand at 4870.561 kb on + strand, within MPMX20_04650 at 4870.564 kb on - strand, within MPMX20_04650 at 4870.649 kb on + strand, within MPMX20_04650 at 4870.659 kb on + strand, within MPMX20_04650 at 4870.759 kb on + strand, within MPMX20_04650 at 4870.826 kb on + strand, within MPMX20_04650 at 4870.826 kb on + strand, within MPMX20_04650 at 4871.027 kb on - strand, within MPMX20_04650 at 4871.083 kb on - strand, within MPMX20_04650 at 4871.107 kb on - strand, within MPMX20_04650 at 4871.157 kb on - strand, within MPMX20_04650 at 4871.159 kb on + strand, within MPMX20_04650 at 4871.197 kb on + strand, within MPMX20_04650 at 4871.388 kb on - strand, within MPMX20_04650 at 4871.513 kb on - strand, within MPMX20_04650 at 4871.515 kb on + strand, within MPMX20_04650 at 4871.596 kb on - strand, within MPMX20_04650 at 4871.665 kb on + strand at 4871.678 kb on - strand at 4871.787 kb on - strand at 4871.888 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 4,869,423 + MPMX20_04649 0.25 +1.5 4,869,439 - MPMX20_04649 0.27 +0.7 4,869,480 + MPMX20_04649 0.30 +0.3 4,869,482 + MPMX20_04649 0.30 -2.7 4,869,490 - MPMX20_04649 0.31 +0.7 4,869,509 - MPMX20_04649 0.32 +0.6 4,869,553 - MPMX20_04649 0.36 +0.4 4,869,575 + MPMX20_04649 0.38 -0.2 4,869,575 + MPMX20_04649 0.38 +1.6 4,869,575 + MPMX20_04649 0.38 +2.7 4,869,585 - MPMX20_04649 0.39 -0.4 4,869,630 + MPMX20_04649 0.43 +0.1 4,869,666 - MPMX20_04649 0.46 -0.2 4,869,671 - MPMX20_04649 0.46 +0.1 4,869,717 + MPMX20_04649 0.50 -1.0 4,869,717 + MPMX20_04649 0.50 -1.6 4,869,723 + MPMX20_04649 0.51 +0.5 4,869,725 - MPMX20_04649 0.51 +0.1 4,869,725 - MPMX20_04649 0.51 +0.1 4,869,750 + MPMX20_04649 0.53 -1.1 4,869,796 - MPMX20_04649 0.57 +0.4 4,869,818 + MPMX20_04649 0.59 -0.2 4,869,826 - MPMX20_04649 0.59 +0.1 4,869,895 + MPMX20_04649 0.65 +0.1 4,869,902 - MPMX20_04649 0.66 +0.0 4,870,016 + MPMX20_04649 0.76 +2.7 4,870,024 - MPMX20_04649 0.76 -0.9 4,870,026 + MPMX20_04649 0.76 -1.6 4,870,028 + MPMX20_04649 0.77 +0.4 4,870,033 + MPMX20_04649 0.77 +0.5 4,870,036 - MPMX20_04649 0.77 -1.8 4,870,041 - MPMX20_04649 0.78 -0.1 4,870,053 + MPMX20_04649 0.79 -0.3 4,870,054 - MPMX20_04649 0.79 -0.5 4,870,061 - MPMX20_04649 0.79 -1.3 4,870,084 + MPMX20_04649 0.81 +0.7 4,870,092 - MPMX20_04649 0.82 -2.2 4,870,298 + -0.2 4,870,424 + -1.4 4,870,498 - -1.6 4,870,536 + -0.5 4,870,561 + MPMX20_04650 0.11 -1.2 4,870,564 - MPMX20_04650 0.11 -0.5 4,870,649 + MPMX20_04650 0.17 +1.7 4,870,659 + MPMX20_04650 0.18 -1.2 4,870,759 + MPMX20_04650 0.25 -0.7 4,870,826 + MPMX20_04650 0.30 -1.7 4,870,826 + MPMX20_04650 0.30 -1.6 4,871,027 - MPMX20_04650 0.45 -0.5 4,871,083 - MPMX20_04650 0.49 -2.8 4,871,107 - MPMX20_04650 0.51 -0.5 4,871,157 - MPMX20_04650 0.54 -2.3 4,871,159 + MPMX20_04650 0.55 -3.3 4,871,197 + MPMX20_04650 0.57 -1.9 4,871,388 - MPMX20_04650 0.71 -2.0 4,871,513 - MPMX20_04650 0.81 -2.6 4,871,515 + MPMX20_04650 0.81 +0.1 4,871,596 - MPMX20_04650 0.87 -3.3 4,871,665 + -2.2 4,871,678 - -3.0 4,871,787 - -0.7 4,871,888 - +0.2
Or see this region's nucleotide sequence