Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04650

Experiment: D-Trehalose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04649 and MPMX20_04650 are separated by 111 nucleotidesMPMX20_04650 and MPMX20_04651 are separated by 72 nucleotides MPMX20_04649: MPMX20_04649 - Multidrug resistance protein MdtL, at 4,869,127 to 4,870,302 _04649 MPMX20_04650: MPMX20_04650 - tRNA modification GTPase MnmE, at 4,870,414 to 4,871,778 _04650 MPMX20_04651: MPMX20_04651 - Membrane protein insertase YidC, at 4,871,851 to 4,873,494 _04651 Position (kb) 4870 4871 4872Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4869.423 kb on + strand, within MPMX20_04649at 4869.439 kb on - strand, within MPMX20_04649at 4869.480 kb on + strand, within MPMX20_04649at 4869.482 kb on + strand, within MPMX20_04649at 4869.490 kb on - strand, within MPMX20_04649at 4869.509 kb on - strand, within MPMX20_04649at 4869.553 kb on - strand, within MPMX20_04649at 4869.575 kb on + strand, within MPMX20_04649at 4869.575 kb on + strand, within MPMX20_04649at 4869.575 kb on + strand, within MPMX20_04649at 4869.585 kb on - strand, within MPMX20_04649at 4869.630 kb on + strand, within MPMX20_04649at 4869.666 kb on - strand, within MPMX20_04649at 4869.671 kb on - strand, within MPMX20_04649at 4869.717 kb on + strand, within MPMX20_04649at 4869.717 kb on + strand, within MPMX20_04649at 4869.723 kb on + strand, within MPMX20_04649at 4869.725 kb on - strand, within MPMX20_04649at 4869.725 kb on - strand, within MPMX20_04649at 4869.750 kb on + strand, within MPMX20_04649at 4869.796 kb on - strand, within MPMX20_04649at 4869.818 kb on + strand, within MPMX20_04649at 4869.826 kb on - strand, within MPMX20_04649at 4869.895 kb on + strand, within MPMX20_04649at 4869.902 kb on - strand, within MPMX20_04649at 4870.016 kb on + strand, within MPMX20_04649at 4870.024 kb on - strand, within MPMX20_04649at 4870.026 kb on + strand, within MPMX20_04649at 4870.028 kb on + strand, within MPMX20_04649at 4870.033 kb on + strand, within MPMX20_04649at 4870.036 kb on - strand, within MPMX20_04649at 4870.041 kb on - strand, within MPMX20_04649at 4870.053 kb on + strand, within MPMX20_04649at 4870.054 kb on - strand, within MPMX20_04649at 4870.061 kb on - strand, within MPMX20_04649at 4870.084 kb on + strand, within MPMX20_04649at 4870.092 kb on - strand, within MPMX20_04649at 4870.298 kb on + strandat 4870.424 kb on + strandat 4870.498 kb on - strandat 4870.536 kb on + strandat 4870.561 kb on + strand, within MPMX20_04650at 4870.564 kb on - strand, within MPMX20_04650at 4870.649 kb on + strand, within MPMX20_04650at 4870.659 kb on + strand, within MPMX20_04650at 4870.759 kb on + strand, within MPMX20_04650at 4870.826 kb on + strand, within MPMX20_04650at 4870.826 kb on + strand, within MPMX20_04650at 4871.027 kb on - strand, within MPMX20_04650at 4871.083 kb on - strand, within MPMX20_04650at 4871.107 kb on - strand, within MPMX20_04650at 4871.157 kb on - strand, within MPMX20_04650at 4871.159 kb on + strand, within MPMX20_04650at 4871.197 kb on + strand, within MPMX20_04650at 4871.388 kb on - strand, within MPMX20_04650at 4871.513 kb on - strand, within MPMX20_04650at 4871.515 kb on + strand, within MPMX20_04650at 4871.596 kb on - strand, within MPMX20_04650at 4871.665 kb on + strandat 4871.678 kb on - strandat 4871.787 kb on - strandat 4871.888 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Trehalose (C)
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4,869,423 + MPMX20_04649 0.25 +1.5
4,869,439 - MPMX20_04649 0.27 +0.7
4,869,480 + MPMX20_04649 0.30 +0.3
4,869,482 + MPMX20_04649 0.30 -2.7
4,869,490 - MPMX20_04649 0.31 +0.7
4,869,509 - MPMX20_04649 0.32 +0.6
4,869,553 - MPMX20_04649 0.36 +0.4
4,869,575 + MPMX20_04649 0.38 -0.2
4,869,575 + MPMX20_04649 0.38 +1.6
4,869,575 + MPMX20_04649 0.38 +2.7
4,869,585 - MPMX20_04649 0.39 -0.4
4,869,630 + MPMX20_04649 0.43 +0.1
4,869,666 - MPMX20_04649 0.46 -0.2
4,869,671 - MPMX20_04649 0.46 +0.1
4,869,717 + MPMX20_04649 0.50 -1.0
4,869,717 + MPMX20_04649 0.50 -1.6
4,869,723 + MPMX20_04649 0.51 +0.5
4,869,725 - MPMX20_04649 0.51 +0.1
4,869,725 - MPMX20_04649 0.51 +0.1
4,869,750 + MPMX20_04649 0.53 -1.1
4,869,796 - MPMX20_04649 0.57 +0.4
4,869,818 + MPMX20_04649 0.59 -0.2
4,869,826 - MPMX20_04649 0.59 +0.1
4,869,895 + MPMX20_04649 0.65 +0.1
4,869,902 - MPMX20_04649 0.66 +0.0
4,870,016 + MPMX20_04649 0.76 +2.7
4,870,024 - MPMX20_04649 0.76 -0.9
4,870,026 + MPMX20_04649 0.76 -1.6
4,870,028 + MPMX20_04649 0.77 +0.4
4,870,033 + MPMX20_04649 0.77 +0.5
4,870,036 - MPMX20_04649 0.77 -1.8
4,870,041 - MPMX20_04649 0.78 -0.1
4,870,053 + MPMX20_04649 0.79 -0.3
4,870,054 - MPMX20_04649 0.79 -0.5
4,870,061 - MPMX20_04649 0.79 -1.3
4,870,084 + MPMX20_04649 0.81 +0.7
4,870,092 - MPMX20_04649 0.82 -2.2
4,870,298 + -0.2
4,870,424 + -1.4
4,870,498 - -1.6
4,870,536 + -0.5
4,870,561 + MPMX20_04650 0.11 -1.2
4,870,564 - MPMX20_04650 0.11 -0.5
4,870,649 + MPMX20_04650 0.17 +1.7
4,870,659 + MPMX20_04650 0.18 -1.2
4,870,759 + MPMX20_04650 0.25 -0.7
4,870,826 + MPMX20_04650 0.30 -1.7
4,870,826 + MPMX20_04650 0.30 -1.6
4,871,027 - MPMX20_04650 0.45 -0.5
4,871,083 - MPMX20_04650 0.49 -2.8
4,871,107 - MPMX20_04650 0.51 -0.5
4,871,157 - MPMX20_04650 0.54 -2.3
4,871,159 + MPMX20_04650 0.55 -3.3
4,871,197 + MPMX20_04650 0.57 -1.9
4,871,388 - MPMX20_04650 0.71 -2.0
4,871,513 - MPMX20_04650 0.81 -2.6
4,871,515 + MPMX20_04650 0.81 +0.1
4,871,596 - MPMX20_04650 0.87 -3.3
4,871,665 + -2.2
4,871,678 - -3.0
4,871,787 - -0.7
4,871,888 - +0.2

Or see this region's nucleotide sequence